RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 DLC1Q96QB1 1528 aa15.82■□□□□ 0.12
PVT1-209ENST00000520913 ADGRB2O60241 1585 aa15.82■□□□□ 0.12
PVT1-209ENST00000520913 HRCP23327 699 aa15.81■□□□□ 0.12
PVT1-209ENST00000520913 MEX3CQ5U5Q3 659 aaKnown RBP15.81■□□□□ 0.12
PVT1-209ENST00000520913 ARHGEF28Q8N1W1 1705 aaKnown RBP15.8■□□□□ 0.12
PVT1-209ENST00000520913 ADGRB1O14514 1584 aa15.8■□□□□ 0.12
PVT1-209ENST00000520913 PNPLA6Q8IY17 1366 aa15.8■□□□□ 0.12
PVT1-209ENST00000520913 KIAA1210Q9ULL0 1709 aa15.8■□□□□ 0.12
PVT1-209ENST00000520913 POTEAQ6S8J7 498 aa15.79■□□□□ 0.12
PVT1-209ENST00000520913 LRRC59Q96AG4 307 aaKnown RBP15.79■□□□□ 0.12
PVT1-209ENST00000520913 STK26Q9P289 416 aa15.79■□□□□ 0.12
PVT1-209ENST00000520913 DHX57Q6P158 1386 aaKnown RBP15.78■□□□□ 0.12
PVT1-209ENST00000520913 PLEKHH1Q9ULM0 1364 aa15.78■□□□□ 0.12
PVT1-209ENST00000520913 TMEM132EQ6IEE7 984 aa15.78■□□□□ 0.12
PVT1-209ENST00000520913 DDX17Q92841 729 aaKnown RBP15.78■□□□□ 0.12
PVT1-209ENST00000520913 PXDNQ92626 1479 aa15.78■□□□□ 0.12
PVT1-209ENST00000520913 C14orf93Q9H972 538 aaKnown RBP15.77■□□□□ 0.12
PVT1-209ENST00000520913 USP32Q8NFA0 1604 aa15.76■□□□□ 0.11
PVT1-209ENST00000520913 ORAI2Q96SN7 254 aa15.76■□□□□ 0.11
PVT1-209ENST00000520913 ITSN1Q15811 1721 aa15.76■□□□□ 0.11
PVT1-209ENST00000520913 SOS2Q07890 1332 aaPredicted RBP15.75■□□□□ 0.11
PVT1-209ENST00000520913 ABCA3Q99758 1704 aa15.75■□□□□ 0.11
PVT1-209ENST00000520913 CFAP70Q5T0N1 1121 aa15.75■□□□□ 0.11
PVT1-209ENST00000520913 WAPLQ7Z5K2 1190 aa15.75■□□□□ 0.11
PVT1-209ENST00000520913 NPHP3Q7Z494 1330 aa15.74■□□□□ 0.11
PVT1-209ENST00000520913 NUTM2BA6NNL0 878 aaPredicted RBP15.74■□□□□ 0.11
PVT1-209ENST00000520913 NUTM2EB1AL46 878 aaPredicted RBP15.74■□□□□ 0.11
PVT1-209ENST00000520913 ZNF772Q68DY9 489 aaPredicted RBP15.74■□□□□ 0.11
PVT1-209ENST00000520913 NUTM2AQ8IVF1 878 aaPredicted RBP15.74■□□□□ 0.11
PVT1-209ENST00000520913 SIRT1Q96EB6 747 aa15.73■□□□□ 0.11
PVT1-209ENST00000520913 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.72■□□□□ 0.11
PVT1-209ENST00000520913 ESCO1Q5FWF5 840 aa15.72■□□□□ 0.11
PVT1-209ENST00000520913 STAC3Q96MF2 364 aa15.71■□□□□ 0.11
PVT1-209ENST00000520913 CDK12Q9NYV4 1490 aaPredicted RBP15.71■□□□□ 0.1
PVT1-209ENST00000520913 AFF2P51816 1311 aa15.7■□□□□ 0.1
PVT1-209ENST00000520913 DCAF11Q8TEB1 546 aa15.7■□□□□ 0.1
PVT1-209ENST00000520913 ANKARQ7Z5J8 1434 aa15.69■□□□□ 0.1
PVT1-209ENST00000520913 TULP4Q9NRJ4 1543 aa15.69■□□□□ 0.1
PVT1-209ENST00000520913 TRPM3Q9HCF6 1732 aaPredicted RBP15.69■□□□□ 0.1
PVT1-209ENST00000520913 NUTM2FA1L443 756 aa15.69■□□□□ 0.1
PVT1-209ENST00000520913 PRAM1Q96QH2 718 aa15.68■□□□□ 0.1
PVT1-209ENST00000520913 TOPAZ1Q8N9V7 1692 aa15.67■□□□□ 0.1
PVT1-209ENST00000520913 EIF3AQ14152 1382 aaKnown RBP15.67■□□□□ 0.1
PVT1-209ENST00000520913 C8orf37Q96NL8 207 aa15.67■□□□□ 0.1
PVT1-209ENST00000520913 KDM2AQ9Y2K7 1162 aa15.67■□□□□ 0.1
PVT1-209ENST00000520913 PLCH1Q4KWH8 1693 aa15.67■□□□□ 0.1
PVT1-209ENST00000520913 POGKQ9P215 609 aa15.66■□□□□ 0.1
PVT1-209ENST00000520913 ALS2Q96Q42 1657 aa15.66■□□□□ 0.1
PVT1-209ENST00000520913 FOXO3O43524 673 aa15.65■□□□□ 0.1
PVT1-209ENST00000520913 SAFB2Q14151 953 aaKnown RBP eCLIP15.65■□□□□ 0.1
PVT1-209ENST00000520913 TNS3Q68CZ2 1445 aa15.65■□□□□ 0.1
PVT1-209ENST00000520913 NWD2Q9ULI1 1742 aa15.65■□□□□ 0.1
PVT1-209ENST00000520913 QRICH2Q9H0J4 1663 aa15.64■□□□□ 0.09
PVT1-209ENST00000520913 TRAK1Q9UPV9 953 aa15.64■□□□□ 0.09
PVT1-209ENST00000520913 CRYBG1Q9Y4K1 1723 aa15.64■□□□□ 0.09
PVT1-209ENST00000520913 ADAMTS2O95450 1211 aa15.63■□□□□ 0.09
PVT1-209ENST00000520913 XPCQ01831 940 aaPredicted RBP15.63■□□□□ 0.09
PVT1-209ENST00000520913 TRPM1Q7Z4N2 1603 aa15.63■□□□□ 0.09
PVT1-209ENST00000520913 RGS12O14924 1447 aa15.62■□□□□ 0.09
PVT1-209ENST00000520913 RXRBP28702 533 aa15.62■□□□□ 0.09
PVT1-209ENST00000520913 PHF8Q9UPP1 1060 aa15.62■□□□□ 0.09
PVT1-209ENST00000520913 NGLY1Q96IV0 654 aa15.61■□□□□ 0.09
PVT1-209ENST00000520913 SPATA31A3Q5VYP0 1347 aa15.61■□□□□ 0.09
PVT1-209ENST00000520913 ATP7BP35670 1465 aa15.6■□□□□ 0.09
PVT1-209ENST00000520913 MINK1Q8N4C8 1332 aaPredicted RBP15.6■□□□□ 0.09
PVT1-209ENST00000520913 SBNO1A3KN83 1393 aa15.6■□□□□ 0.09
PVT1-209ENST00000520913 KRT28Q7Z3Y7 464 aa15.59■□□□□ 0.09
PVT1-209ENST00000520913 ARHGEF10O15013 1369 aa15.59■□□□□ 0.09
PVT1-209ENST00000520913 ATRNO75882 1429 aa15.59■□□□□ 0.09
PVT1-209ENST00000520913 PHRF1Q9P1Y6 1649 aaKnown RBP15.58■□□□□ 0.09
PVT1-209ENST00000520913 NRAPQ86VF7 1730 aa15.58■□□□□ 0.08
PVT1-209ENST00000520913 RBM6P78332 1123 aaKnown RBP15.58■□□□□ 0.08
PVT1-209ENST00000520913 HIRIP3Q9BW71 556 aaPredicted RBP15.58■□□□□ 0.08
PVT1-209ENST00000520913 PSME1Q06323 249 aa15.57■□□□□ 0.08
PVT1-209ENST00000520913 QTRT2Q9H974 415 aaKnown RBP15.57■□□□□ 0.08
PVT1-209ENST00000520913 USP21Q9UK80 565 aa15.57■□□□□ 0.08
PVT1-209ENST00000520913 EP400Q96L91 3159 aa15.56■□□□□ 0.08
PVT1-209ENST00000520913 WASLO00401 505 aaPredicted RBP15.56■□□□□ 0.08
PVT1-209ENST00000520913 FNBP4Q8N3X1 1017 aaPredicted RBP15.56■□□□□ 0.08
PVT1-209ENST00000520913 SLIT2O94813 1529 aa15.56■□□□□ 0.08
PVT1-209ENST00000520913 COL14A1Q05707 1796 aaKnown RBP15.56■□□□□ 0.08
PVT1-209ENST00000520913 GLI3P10071 1580 aa15.55■□□□□ 0.08
PVT1-209ENST00000520913 BCL9LQ86UU0 1499 aa15.55■□□□□ 0.08
PVT1-209ENST00000520913 PRR36Q9H6K5 1346 aa15.55■□□□□ 0.08
PVT1-209ENST00000520913 TRPC5Q9UL62 973 aaPredicted RBP15.55■□□□□ 0.08
PVT1-209ENST00000520913 GPRASP1Q5JY77 1395 aa15.54■□□□□ 0.08
PVT1-209ENST00000520913 PMFBP1Q8TBY8 1022 aa15.54■□□□□ 0.08
PVT1-209ENST00000520913 BRWD3Q6RI45 1802 aa15.54■□□□□ 0.08
PVT1-209ENST00000520913 HAP1P54257 671 aaPredicted RBP15.52■□□□□ 0.08
PVT1-209ENST00000520913 LMOD2Q6P5Q4 547 aa15.5■□□□□ 0.07
PVT1-209ENST00000520913 UPF1Q92900 1129 aaKnown RBP eCLIP15.5■□□□□ 0.07
PVT1-209ENST00000520913 RALGAPBQ86X10 1494 aa15.49■□□□□ 0.07
PVT1-209ENST00000520913 ATAD2Q6PL18 1390 aa15.49■□□□□ 0.07
PVT1-209ENST00000520913 NBPF1Q3BBV0 1214 aa15.48■□□□□ 0.07
PVT1-209ENST00000520913 NGDNQ8NEJ9 315 aaKnown RBP15.48■□□□□ 0.07
PVT1-209ENST00000520913 NRKQ7Z2Y5 1582 aa15.48■□□□□ 0.07
PVT1-209ENST00000520913 CENPJQ9HC77 1338 aaPredicted RBP15.47■□□□□ 0.07
PVT1-209ENST00000520913 AKAP12Q02952 1782 aa15.47■□□□□ 0.07
PVT1-209ENST00000520913 L3MBTL2Q969R5 705 aa15.47■□□□□ 0.07
PVT1-209ENST00000520913 NUDT16Q96DE0 195 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms