RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-215	ENST00000520804	STK26	Q9P289	416 aa		29.15	■■■□□ 2.26
PABPC1-215	ENST00000520804	AFF2	P51816	1311 aa		29.14	■■■□□ 2.25
PABPC1-215	ENST00000520804	ABCC11	Q96J66	1382 aa		29.13	■■■□□ 2.25
PABPC1-215	ENST00000520804	TMEM132E	Q6IEE7	984 aa		29.13	■■■□□ 2.25
PABPC1-215	ENST00000520804	KNDC1	Q76NI1	1749 aa		29.13	■■■□□ 2.25
PABPC1-215	ENST00000520804	RAB3GAP2	Q9H2M9	1393 aa		29.13	■■■□□ 2.25
PABPC1-215	ENST00000520804	WAPL	Q7Z5K2	1190 aa		29.12	■■■□□ 2.25
PABPC1-215	ENST00000520804	RXRB	P28702	533 aa		29.1	■■■□□ 2.25
PABPC1-215	ENST00000520804	C8orf37	Q96NL8	207 aa		29.09	■■■□□ 2.25
PABPC1-215	ENST00000520804	ESCO1	Q5FWF5	840 aa		29.08	■■■□□ 2.25
PABPC1-215	ENST00000520804	YTHDC2	Q9H6S0	1430 aa	Known RBP	29.08	■■■□□ 2.25
PABPC1-215	ENST00000520804	NRXN1	Q9ULB1	1477 aa		29.07	■■■□□ 2.24
PABPC1-215	ENST00000520804	PLEKHH1	Q9ULM0	1364 aa		29.07	■■■□□ 2.24
PABPC1-215	ENST00000520804	MYOM2	P54296	1465 aa		29.06	■■■□□ 2.24
PABPC1-215	ENST00000520804	C14orf93	Q9H972	538 aa	Known RBP	29.06	■■■□□ 2.24
PABPC1-215	ENST00000520804	CDK12	Q9NYV4	1490 aa	Predicted RBP	29.04	■■■□□ 2.24
PABPC1-215	ENST00000520804	NPHP3	Q7Z494	1330 aa		29.04	■■■□□ 2.24
PABPC1-215	ENST00000520804	ADAMTS2	O95450	1211 aa		29.03	■■■□□ 2.24
PABPC1-215	ENST00000520804	SIRT1	Q96EB6	747 aa		29.03	■■■□□ 2.24
PABPC1-215	ENST00000520804	COL22A1	Q8NFW1	1626 aa	Predicted RBP	29.02	■■■□□ 2.24
PABPC1-215	ENST00000520804	CFAP70	Q5T0N1	1121 aa		29.01	■■■□□ 2.23
PABPC1-215	ENST00000520804	PXDN	Q92626	1479 aa		29.01	■■■□□ 2.23
PABPC1-215	ENST00000520804	NUTM2F	A1L443	756 aa		29	■■■□□ 2.23
PABPC1-215	ENST00000520804	NGLY1	Q96IV0	654 aa		29	■■■□□ 2.23
PABPC1-215	ENST00000520804	FMN2	Q9NZ56	1722 aa		29	■■■□□ 2.23
PABPC1-215	ENST00000520804	FOXO3	O43524	673 aa		28.99	■■■□□ 2.23
PABPC1-215	ENST00000520804	QTRT2	Q9H974	415 aa	Known RBP	28.99	■■■□□ 2.23
PABPC1-215	ENST00000520804	DHX57	Q6P158	1386 aa	Known RBP	28.99	■■■□□ 2.23
PABPC1-215	ENST00000520804	RBM6	P78332	1123 aa	Known RBP	28.96	■■■□□ 2.23
PABPC1-215	ENST00000520804	XPC	Q01831	940 aa	Predicted RBP	28.95	■■■□□ 2.22
PABPC1-215	ENST00000520804	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.95	■■■□□ 2.22
PABPC1-215	ENST00000520804	KIF1A	Q12756	1690 aa		28.93	■■■□□ 2.22
PABPC1-215	ENST00000520804	RGS12	O14924	1447 aa		28.92	■■■□□ 2.22
PABPC1-215	ENST00000520804	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.91	■■■□□ 2.22
PABPC1-215	ENST00000520804	USP21	Q9UK80	565 aa		28.91	■■■□□ 2.22
PABPC1-215	ENST00000520804	HRC	P23327	699 aa		28.9	■■■□□ 2.22
PABPC1-215	ENST00000520804	PRAM1	Q96QH2	718 aa		28.89	■■■□□ 2.22
PABPC1-215	ENST00000520804	DLC1	Q96QB1	1528 aa		28.89	■■■□□ 2.21
PABPC1-215	ENST00000520804	ADGRB1	O14514	1584 aa		28.87	■■■□□ 2.21
PABPC1-215	ENST00000520804	RGPD8	O14715	1765 aa	Predicted RBP	28.86	■■■□□ 2.21
PABPC1-215	ENST00000520804	TRPC5	Q9UL62	973 aa	Predicted RBP	28.86	■■■□□ 2.21
PABPC1-215	ENST00000520804	MARF1	Q9Y4F3	1742 aa	Known RBP	28.86	■■■□□ 2.21
PABPC1-215	ENST00000520804	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.85	■■■□□ 2.21
PABPC1-215	ENST00000520804	SPATA31A3	Q5VYP0	1347 aa		28.85	■■■□□ 2.21
PABPC1-215	ENST00000520804	PHF8	Q9UPP1	1060 aa		28.84	■■■□□ 2.21
PABPC1-215	ENST00000520804	KRT28	Q7Z3Y7	464 aa		28.83	■■■□□ 2.21
PABPC1-215	ENST00000520804	DCAF11	Q8TEB1	546 aa		28.83	■■■□□ 2.21
PABPC1-215	ENST00000520804	POGK	Q9P215	609 aa		28.83	■■■□□ 2.21
PABPC1-215	ENST00000520804	ATRN	O75882	1429 aa		28.83	■■■□□ 2.21
PABPC1-215	ENST00000520804	KDM2A	Q9Y2K7	1162 aa		28.82	■■■□□ 2.2
PABPC1-215	ENST00000520804	STAC3	Q96MF2	364 aa		28.8	■■■□□ 2.2
PABPC1-215	ENST00000520804	ADGRB2	O60241	1585 aa		28.79	■■■□□ 2.2
PABPC1-215	ENST00000520804	BCL9L	Q86UU0	1499 aa		28.79	■■■□□ 2.2
PABPC1-215	ENST00000520804	TRAK1	Q9UPV9	953 aa		28.79	■■■□□ 2.2
PABPC1-215	ENST00000520804	ANKAR	Q7Z5J8	1434 aa		28.77	■■■□□ 2.2
PABPC1-215	ENST00000520804	USP32	Q8NFA0	1604 aa		28.77	■■■□□ 2.2
PABPC1-215	ENST00000520804	PSME1	Q06323	249 aa		28.77	■■■□□ 2.2
PABPC1-215	ENST00000520804	TNS3	Q68CZ2	1445 aa		28.76	■■■□□ 2.19
PABPC1-215	ENST00000520804	SBNO1	A3KN83	1393 aa		28.74	■■■□□ 2.19
PABPC1-215	ENST00000520804	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.72	■■■□□ 2.19
PABPC1-215	ENST00000520804	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.71	■■■□□ 2.19
PABPC1-215	ENST00000520804	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.7	■■■□□ 2.19
PABPC1-215	ENST00000520804	SLIT2	O94813	1529 aa		28.7	■■■□□ 2.19
PABPC1-215	ENST00000520804	PMFBP1	Q8TBY8	1022 aa		28.7	■■■□□ 2.18
PABPC1-215	ENST00000520804	ATAD2	Q6PL18	1390 aa		28.7	■■■□□ 2.18
PABPC1-215	ENST00000520804	GJD4	Q96KN9	370 aa	Predicted RBP	28.69	■■■□□ 2.18
PABPC1-215	ENST00000520804	EIF3A	Q14152	1382 aa	Known RBP	28.69	■■■□□ 2.18
PABPC1-215	ENST00000520804	ARHGEF10	O15013	1369 aa		28.68	■■■□□ 2.18
PABPC1-215	ENST00000520804	UNC5CL	Q8IV45	518 aa		28.68	■■■□□ 2.18
PABPC1-215	ENST00000520804	TULP4	Q9NRJ4	1543 aa		28.67	■■■□□ 2.18
PABPC1-215	ENST00000520804	WASL	O00401	505 aa	Predicted RBP	28.66	■■■□□ 2.18
PABPC1-215	ENST00000520804	HAP1	P54257	671 aa	Predicted RBP	28.66	■■■□□ 2.18
PABPC1-215	ENST00000520804	CABLES1	Q8TDN4	633 aa		28.66	■■■□□ 2.18
PABPC1-215	ENST00000520804	PRR36	Q9H6K5	1346 aa		28.66	■■■□□ 2.18
PABPC1-215	ENST00000520804	LMOD2	Q6P5Q4	547 aa		28.65	■■■□□ 2.18
PABPC1-215	ENST00000520804	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.64	■■■□□ 2.18
PABPC1-215	ENST00000520804	ABCA3	Q99758	1704 aa		28.64	■■■□□ 2.18
PABPC1-215	ENST00000520804	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.63	■■■□□ 2.17
PABPC1-215	ENST00000520804	PLEKHG5	O94827	1062 aa		28.62	■■■□□ 2.17
PABPC1-215	ENST00000520804	GLI3	P10071	1580 aa		28.62	■■■□□ 2.17
PABPC1-215	ENST00000520804	RALGAPB	Q86X10	1494 aa		28.61	■■■□□ 2.17
PABPC1-215	ENST00000520804	GPRASP1	Q5JY77	1395 aa		28.6	■■■□□ 2.17
PABPC1-215	ENST00000520804	PLCH1	Q4KWH8	1693 aa		28.58	■■■□□ 2.17
PABPC1-215	ENST00000520804	NWD2	Q9ULI1	1742 aa		28.58	■■■□□ 2.17
PABPC1-215	ENST00000520804	ALS2	Q96Q42	1657 aa		28.58	■■■□□ 2.16
PABPC1-215	ENST00000520804	KIAA1210	Q9ULL0	1709 aa		28.57	■■■□□ 2.16
PABPC1-215	ENST00000520804	VPS72	Q15906	364 aa		28.55	■■■□□ 2.16
PABPC1-215	ENST00000520804	NGDN	Q8NEJ9	315 aa	Known RBP	28.54	■■■□□ 2.16
PABPC1-215	ENST00000520804	ITSN1	Q15811	1721 aa		28.54	■■■□□ 2.16
PABPC1-215	ENST00000520804	ATP7B	P35670	1465 aa		28.53	■■■□□ 2.16
PABPC1-215	ENST00000520804	FAM83G	A6ND36	823 aa		28.53	■■■□□ 2.16
PABPC1-215	ENST00000520804	NUDT16	Q96DE0	195 aa	Known RBP	28.52	■■■□□ 2.16
PABPC1-215	ENST00000520804	CCDC125	Q86Z20	511 aa		28.5	■■■□□ 2.15
PABPC1-215	ENST00000520804	CDK19	Q9BWU1	502 aa		28.49	■■■□□ 2.15
PABPC1-215	ENST00000520804	NBPF1	Q3BBV0	1214 aa		28.48	■■■□□ 2.15
PABPC1-215	ENST00000520804	EP400	Q96L91	3159 aa		28.48	■■■□□ 2.15
PABPC1-215	ENST00000520804	PAK3	O75914	559 aa	Predicted RBP	28.47	■■■□□ 2.15
PABPC1-215	ENST00000520804	CCDC9	Q9Y3X0	531 aa	Known RBP	28.47	■■■□□ 2.15
PABPC1-215	ENST00000520804	BRWD3	Q6RI45	1802 aa		28.47	■■■□□ 2.15
PABPC1-215	ENST00000520804	NRAP	Q86VF7	1730 aa		28.46	■■■□□ 2.15

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