RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 FAM135BQ49AJ0 1406 aa29.87■■■□□ 2.37
PTP4A3-203ENST00000520105 XRN1Q8IZH2 1706 aaKnown RBP29.84■■■□□ 2.37
PTP4A3-203ENST00000520105 CDCA8Q53HL2 280 aa29.81■■■□□ 2.36
PTP4A3-203ENST00000520105 PTCH1Q13635 1447 aa29.81■■■□□ 2.36
PTP4A3-203ENST00000520105 EVC2Q86UK5 1308 aa29.8■■■□□ 2.36
PTP4A3-203ENST00000520105 TULP4Q9NRJ4 1543 aa29.79■■■□□ 2.36
PTP4A3-203ENST00000520105 RBM33Q96EV2 1170 aaKnown RBP29.75■■■□□ 2.35
PTP4A3-203ENST00000520105 CABP2Q9NPB3 220 aa29.75■■■□□ 2.35
PTP4A3-203ENST00000520105 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.74■■■□□ 2.35
PTP4A3-203ENST00000520105 CDK19Q9BWU1 502 aa29.74■■■□□ 2.35
PTP4A3-203ENST00000520105 SRPK2P78362 688 aaKnown RBP29.72■■■□□ 2.35
PTP4A3-203ENST00000520105 NWD1Q149M9 1564 aa29.71■■■□□ 2.35
PTP4A3-203ENST00000520105 WASLO00401 505 aaPredicted RBP29.7■■■□□ 2.35
PTP4A3-203ENST00000520105 AEBP2Q6ZN18 517 aaPredicted RBP29.7■■■□□ 2.35
PTP4A3-203ENST00000520105 DMRT2Q9Y5R5 561 aa29.69■■■□□ 2.34
PTP4A3-203ENST00000520105 STRCP1A6NGW2 1772 aa29.68■■■□□ 2.34
PTP4A3-203ENST00000520105 PUS7Q96PZ0 661 aaKnown RBP29.68■■■□□ 2.34
PTP4A3-203ENST00000520105 PROSER2Q86WR7 435 aaPredicted RBP29.67■■■□□ 2.34
PTP4A3-203ENST00000520105 TMC1Q8TDI8 760 aa29.65■■■□□ 2.34
PTP4A3-203ENST00000520105 ZNF335Q9H4Z2 1342 aaPredicted RBP29.64■■■□□ 2.33
PTP4A3-203ENST00000520105 SLC12A5Q9H2X9 1139 aa29.63■■■□□ 2.33
PTP4A3-203ENST00000520105 PANK3Q9H999 370 aa29.63■■■□□ 2.33
PTP4A3-203ENST00000520105 MYOM1P52179 1685 aa29.62■■■□□ 2.33
PTP4A3-203ENST00000520105 NKTRP30414 1462 aaKnown RBP29.62■■■□□ 2.33
PTP4A3-203ENST00000520105 ADGRB2O60241 1585 aa29.62■■■□□ 2.33
PTP4A3-203ENST00000520105 NUTM2FA1L443 756 aa29.6■■■□□ 2.33
PTP4A3-203ENST00000520105 C14orf37Q86TY3 774 aa29.59■■■□□ 2.33
PTP4A3-203ENST00000520105 ATAD2Q6PL18 1390 aa29.59■■■□□ 2.33
PTP4A3-203ENST00000520105 NUDT16Q96DE0 195 aaKnown RBP29.57■■■□□ 2.32
PTP4A3-203ENST00000520105 NALCNQ8IZF0 1738 aa29.57■■■□□ 2.32
PTP4A3-203ENST00000520105 PRR36Q9H6K5 1346 aa29.56■■■□□ 2.32
PTP4A3-203ENST00000520105 TMEM94Q12767 1356 aa29.55■■■□□ 2.32
PTP4A3-203ENST00000520105 CABP1Q9NZU7 370 aa29.55■■■□□ 2.32
PTP4A3-203ENST00000520105 ADGRL3Q9HAR2 1447 aa29.55■■■□□ 2.32
PTP4A3-203ENST00000520105 PER1O15534 1290 aaPredicted RBP29.54■■■□□ 2.32
PTP4A3-203ENST00000520105 MIER1Q8N108 512 aa29.53■■■□□ 2.32
PTP4A3-203ENST00000520105 CCDC61Q9Y6R9 512 aa29.52■■■□□ 2.32
PTP4A3-203ENST00000520105 ATP7BP35670 1465 aa29.51■■■□□ 2.31
PTP4A3-203ENST00000520105 CNGB1Q14028 1251 aaPredicted RBP29.5■■■□□ 2.31
PTP4A3-203ENST00000520105 CARD14Q9BXL6 1004 aa29.49■■■□□ 2.31
PTP4A3-203ENST00000520105 NINLQ9Y2I6 1382 aa29.49■■■□□ 2.31
PTP4A3-203ENST00000520105 C19orf44Q9H6X5 657 aa29.48■■■□□ 2.31
PTP4A3-203ENST00000520105 PPIP5K1Q6PFW1 1433 aa29.48■■■□□ 2.31
PTP4A3-203ENST00000520105 CDC42BPGQ6DT37 1551 aa29.47■■■□□ 2.31
PTP4A3-203ENST00000520105 LRRC7Q96NW7 1537 aa29.47■■■□□ 2.31
PTP4A3-203ENST00000520105 ANP32CO43423 234 aa29.46■■■□□ 2.31
PTP4A3-203ENST00000520105 USP32Q8NFA0 1604 aa29.46■■■□□ 2.31
PTP4A3-203ENST00000520105 NCOA3Q9Y6Q9 1424 aa29.45■■■□□ 2.31
PTP4A3-203ENST00000520105 FMN2Q9NZ56 1722 aa29.45■■■□□ 2.31
PTP4A3-203ENST00000520105 KNSTRNQ9Y448 316 aa29.45■■■□□ 2.31
PTP4A3-203ENST00000520105 RGPD8O14715 1765 aaPredicted RBP29.45■■■□□ 2.3
PTP4A3-203ENST00000520105 ANKRD36BQ8N2N9 1353 aa29.45■■■□□ 2.3
PTP4A3-203ENST00000520105 TERF2IPQ9NYB0 399 aa29.44■■■□□ 2.3
PTP4A3-203ENST00000520105 CD163L1Q9NR16 1453 aa29.44■■■□□ 2.3
PTP4A3-203ENST00000520105 XIRP1Q702N8 1843 aaKnown RBP29.44■■■□□ 2.3
PTP4A3-203ENST00000520105 A0A1W2PP64 1363 aa29.43■■■□□ 2.3
PTP4A3-203ENST00000520105 ANKARQ7Z5J8 1434 aa29.41■■■□□ 2.3
PTP4A3-203ENST00000520105 HDGFL2Q7Z4V5 671 aaPredicted RBP29.4■■■□□ 2.3
PTP4A3-203ENST00000520105 TOPAZ1Q8N9V7 1692 aa29.39■■■□□ 2.3
PTP4A3-203ENST00000520105 PLEKHG3A1L390 1219 aa29.39■■■□□ 2.3
PTP4A3-203ENST00000520105 PMFBP1Q8TBY8 1022 aa29.39■■■□□ 2.3
PTP4A3-203ENST00000520105 NSD3Q9BZ95 1437 aa29.39■■■□□ 2.29
PTP4A3-203ENST00000520105 ATF3P18847 181 aa29.38■■■□□ 2.29
PTP4A3-203ENST00000520105 PRKRIP1Q9H875 184 aaPredicted RBP29.38■■■□□ 2.29
PTP4A3-203ENST00000520105 AMER1Q5JTC6 1135 aaPredicted RBP29.38■■■□□ 2.29
PTP4A3-203ENST00000520105 CC2D1BQ5T0F9 858 aaKnown RBP29.38■■■□□ 2.29
PTP4A3-203ENST00000520105 MSH6P52701 1360 aa29.37■■■□□ 2.29
PTP4A3-203ENST00000520105 ACEP12821 1306 aa29.36■■■□□ 2.29
PTP4A3-203ENST00000520105 CPSF1Q10570 1443 aaKnown RBP29.36■■■□□ 2.29
PTP4A3-203ENST00000520105 ITSN1Q15811 1721 aa29.34■■■□□ 2.29
PTP4A3-203ENST00000520105 ESCO1Q5FWF5 840 aa29.34■■■□□ 2.29
PTP4A3-203ENST00000520105 KTN1Q86UP2 1357 aaKnown RBP29.33■■■□□ 2.29
PTP4A3-203ENST00000520105 DCCP43146 1447 aa29.33■■■□□ 2.29
PTP4A3-203ENST00000520105 CADPS2Q86UW7 1296 aa29.33■■■□□ 2.29
PTP4A3-203ENST00000520105 ORAI2Q96SN7 254 aa29.31■■■□□ 2.28
PTP4A3-203ENST00000520105 LTBP4Q8N2S1 1624 aa29.31■■■□□ 2.28
PTP4A3-203ENST00000520105 NGDNQ8NEJ9 315 aaKnown RBP29.31■■■□□ 2.28
PTP4A3-203ENST00000520105 ZNF692Q9BU19 519 aaPredicted RBP29.31■■■□□ 2.28
PTP4A3-203ENST00000520105 PHF8Q9UPP1 1060 aa29.3■■■□□ 2.28
PTP4A3-203ENST00000520105 C1orf167Q5SNV9 1468 aa29.29■■■□□ 2.28
PTP4A3-203ENST00000520105 MST1RQ04912 1400 aa29.28■■■□□ 2.28
PTP4A3-203ENST00000520105 CGNL1Q0VF96 1302 aa29.28■■■□□ 2.28
PTP4A3-203ENST00000520105 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.28■■■□□ 2.28
PTP4A3-203ENST00000520105 AKAP12Q02952 1782 aa29.28■■■□□ 2.28
PTP4A3-203ENST00000520105 POLR3AO14802 1390 aaPredicted RBP29.27■■■□□ 2.28
PTP4A3-203ENST00000520105 NPC1L1Q9UHC9 1359 aa29.26■■■□□ 2.28
PTP4A3-203ENST00000520105 RALBP1Q15311 655 aa29.25■■■□□ 2.27
PTP4A3-203ENST00000520105 MON2Q7Z3U7 1717 aa29.24■■■□□ 2.27
PTP4A3-203ENST00000520105 EDC4Q6P2E9 1401 aaKnown RBP29.24■■■□□ 2.27
PTP4A3-203ENST00000520105 PARD3Q8TEW0 1356 aa29.24■■■□□ 2.27
PTP4A3-203ENST00000520105 FYB1O15117 783 aa29.23■■■□□ 2.27
PTP4A3-203ENST00000520105 USP6P35125 1406 aa29.23■■■□□ 2.27
PTP4A3-203ENST00000520105 GGNBP2Q9H3C7 697 aa29.21■■■□□ 2.27
PTP4A3-203ENST00000520105 FOXO3O43524 673 aa29.21■■■□□ 2.27
PTP4A3-203ENST00000520105 SLAIN2Q9P270 581 aa29.2■■■□□ 2.26
PTP4A3-203ENST00000520105 TTC21BQ7Z4L5 1316 aa29.19■■■□□ 2.26
PTP4A3-203ENST00000520105 NME9Q86XW9 330 aa29.18■■■□□ 2.26
PTP4A3-203ENST00000520105 PSME1Q06323 249 aa29.17■■■□□ 2.26
PTP4A3-203ENST00000520105 MORC1Q86VD1 984 aa29.17■■■□□ 2.26
PTP4A3-203ENST00000520105 SSH2Q76I76 1423 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms