RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 ABCC11Q96J66 1382 aa21.91■■□□□ 1.1
FBXO28-204ENST00000519894 CFAP70Q5T0N1 1121 aa21.91■■□□□ 1.1
FBXO28-204ENST00000519894 WAPLQ7Z5K2 1190 aa21.89■■□□□ 1.09
FBXO28-204ENST00000519894 C1orf167Q5SNV9 1468 aa21.89■■□□□ 1.09
FBXO28-204ENST00000519894 YTHDC2Q9H6S0 1430 aaKnown RBP21.89■■□□□ 1.09
FBXO28-204ENST00000519894 KNDC1Q76NI1 1749 aa21.88■■□□□ 1.09
FBXO28-204ENST00000519894 RGS17Q9UGC6 210 aaPredicted RBP21.87■■□□□ 1.09
FBXO28-204ENST00000519894 PLEKHH1Q9ULM0 1364 aa21.87■■□□□ 1.09
FBXO28-204ENST00000519894 KDM2AQ9Y2K7 1162 aa21.86■■□□□ 1.09
FBXO28-204ENST00000519894 NHSL1Q5SYE7 1610 aa21.86■■□□□ 1.09
FBXO28-204ENST00000519894 SOCS7O14512 581 aa21.85■■□□□ 1.09
FBXO28-204ENST00000519894 DCAF11Q8TEB1 546 aa21.85■■□□□ 1.09
FBXO28-204ENST00000519894 DDX17Q92841 729 aaKnown RBP21.85■■□□□ 1.09
FBXO28-204ENST00000519894 SIRT1Q96EB6 747 aa21.85■■□□□ 1.09
FBXO28-204ENST00000519894 DHX57Q6P158 1386 aaKnown RBP21.85■■□□□ 1.09
FBXO28-204ENST00000519894 LAMC1P11047 1609 aa21.84■■□□□ 1.09
FBXO28-204ENST00000519894 ORAI2Q96SN7 254 aa21.84■■□□□ 1.09
FBXO28-204ENST00000519894 STAC3Q96MF2 364 aa21.82■■□□□ 1.08
FBXO28-204ENST00000519894 CDC42BPGQ6DT37 1551 aa21.82■■□□□ 1.08
FBXO28-204ENST00000519894 SPATA31A6Q5VVP1 1343 aa21.81■■□□□ 1.08
FBXO28-204ENST00000519894 SHPRHQ149N8 1683 aa21.81■■□□□ 1.08
FBXO28-204ENST00000519894 LRRC59Q96AG4 307 aaKnown RBP21.79■■□□□ 1.08
FBXO28-204ENST00000519894 ADGRB1O14514 1584 aa21.78■■□□□ 1.08
FBXO28-204ENST00000519894 LRP6O75581 1613 aa21.78■■□□□ 1.08
FBXO28-204ENST00000519894 NUTM2FA1L443 756 aa21.76■■□□□ 1.07
FBXO28-204ENST00000519894 ESCO1Q5FWF5 840 aa21.75■■□□□ 1.07
FBXO28-204ENST00000519894 PRAM1Q96QH2 718 aa21.75■■□□□ 1.07
FBXO28-204ENST00000519894 SOS2Q07890 1332 aaPredicted RBP21.75■■□□□ 1.07
FBXO28-204ENST00000519894 DLC1Q96QB1 1528 aa21.75■■□□□ 1.07
FBXO28-204ENST00000519894 POTEAQ6S8J7 498 aa21.74■■□□□ 1.07
FBXO28-204ENST00000519894 SAFB2Q14151 953 aaKnown RBP eCLIP21.73■■□□□ 1.07
FBXO28-204ENST00000519894 TRAK1Q9UPV9 953 aa21.73■■□□□ 1.07
FBXO28-204ENST00000519894 PNPLA6Q8IY17 1366 aa21.73■■□□□ 1.07
FBXO28-204ENST00000519894 FMN2Q9NZ56 1722 aa21.72■■□□□ 1.07
FBXO28-204ENST00000519894 NUTM2BA6NNL0 878 aaPredicted RBP21.72■■□□□ 1.07
FBXO28-204ENST00000519894 NUTM2EB1AL46 878 aaPredicted RBP21.72■■□□□ 1.07
FBXO28-204ENST00000519894 NUTM2AQ8IVF1 878 aaPredicted RBP21.72■■□□□ 1.07
FBXO28-204ENST00000519894 POGKQ9P215 609 aa21.71■■□□□ 1.07
FBXO28-204ENST00000519894 MEX3CQ5U5Q3 659 aaKnown RBP21.7■■□□□ 1.06
FBXO28-204ENST00000519894 FOXO3O43524 673 aa21.68■■□□□ 1.06
FBXO28-204ENST00000519894 NPHP3Q7Z494 1330 aa21.68■■□□□ 1.06
FBXO28-204ENST00000519894 SIN3AQ96ST3 1273 aa21.67■■□□□ 1.06
FBXO28-204ENST00000519894 PXDNQ92626 1479 aa21.65■■□□□ 1.06
FBXO28-204ENST00000519894 XPCQ01831 940 aaPredicted RBP21.65■■□□□ 1.06
FBXO28-204ENST00000519894 RGPD8O14715 1765 aaPredicted RBP21.65■■□□□ 1.06
FBXO28-204ENST00000519894 MINK1Q8N4C8 1332 aaPredicted RBP21.63■■□□□ 1.05
FBXO28-204ENST00000519894 ADGRB2O60241 1585 aa21.63■■□□□ 1.05
FBXO28-204ENST00000519894 HIRIP3Q9BW71 556 aaPredicted RBP21.63■■□□□ 1.05
FBXO28-204ENST00000519894 KIAA1210Q9ULL0 1709 aa21.63■■□□□ 1.05
FBXO28-204ENST00000519894 NBPF1Q3BBV0 1214 aa21.62■■□□□ 1.05
FBXO28-204ENST00000519894 ZNF772Q68DY9 489 aaPredicted RBP21.62■■□□□ 1.05
FBXO28-204ENST00000519894 L3MBTL2Q969R5 705 aa21.62■■□□□ 1.05
FBXO28-204ENST00000519894 PHF8Q9UPP1 1060 aa21.62■■□□□ 1.05
FBXO28-204ENST00000519894 KIF1AQ12756 1690 aa21.62■■□□□ 1.05
FBXO28-204ENST00000519894 TRIM26Q12899 539 aaPredicted RBP21.61■■□□□ 1.05
FBXO28-204ENST00000519894 ARHGEF28Q8N1W1 1705 aaKnown RBP21.6■■□□□ 1.05
FBXO28-204ENST00000519894 USP32Q8NFA0 1604 aa21.6■■□□□ 1.05
FBXO28-204ENST00000519894 NEUROD1Q13562 356 aa21.6■■□□□ 1.05
FBXO28-204ENST00000519894 COL22A1Q8NFW1 1626 aaPredicted RBP21.59■■□□□ 1.05
FBXO28-204ENST00000519894 KRT28Q7Z3Y7 464 aa21.59■■□□□ 1.05
FBXO28-204ENST00000519894 AFF2P51816 1311 aa21.58■■□□□ 1.05
FBXO28-204ENST00000519894 ANKARQ7Z5J8 1434 aa21.58■■□□□ 1.05
FBXO28-204ENST00000519894 WASLO00401 505 aaPredicted RBP21.58■■□□□ 1.05
FBXO28-204ENST00000519894 ADAMTS2O95450 1211 aa21.58■■□□□ 1.05
FBXO28-204ENST00000519894 C8orf37Q96NL8 207 aa21.58■■□□□ 1.05
FBXO28-204ENST00000519894 SPATA31A3Q5VYP0 1347 aa21.56■■□□□ 1.04
FBXO28-204ENST00000519894 PRR36Q9H6K5 1346 aa21.56■■□□□ 1.04
FBXO28-204ENST00000519894 PMFBP1Q8TBY8 1022 aa21.55■■□□□ 1.04
FBXO28-204ENST00000519894 TULP4Q9NRJ4 1543 aa21.54■■□□□ 1.04
FBXO28-204ENST00000519894 EIF3AQ14152 1382 aaKnown RBP21.53■■□□□ 1.04
FBXO28-204ENST00000519894 NGLY1Q96IV0 654 aa21.53■■□□□ 1.04
FBXO28-204ENST00000519894 PSME1Q06323 249 aa21.52■■□□□ 1.04
FBXO28-204ENST00000519894 SBNO1A3KN83 1393 aa21.5■■□□□ 1.03
FBXO28-204ENST00000519894 RXRBP28702 533 aa21.5■■□□□ 1.03
FBXO28-204ENST00000519894 TNS3Q68CZ2 1445 aa21.49■■□□□ 1.03
FBXO28-204ENST00000519894 CDK19Q9BWU1 502 aa21.49■■□□□ 1.03
FBXO28-204ENST00000519894 QTRT2Q9H974 415 aaKnown RBP21.49■■□□□ 1.03
FBXO28-204ENST00000519894 NCBP3Q53F19 620 aaKnown RBP21.48■■□□□ 1.03
FBXO28-204ENST00000519894 FNBP4Q8N3X1 1017 aaPredicted RBP21.48■■□□□ 1.03
FBXO28-204ENST00000519894 NUDT16Q96DE0 195 aaKnown RBP21.48■■□□□ 1.03
FBXO28-204ENST00000519894 TRPM1Q7Z4N2 1603 aa21.47■■□□□ 1.03
FBXO28-204ENST00000519894 ATP7BP35670 1465 aa21.46■■□□□ 1.03
FBXO28-204ENST00000519894 USP21Q9UK80 565 aa21.46■■□□□ 1.03
FBXO28-204ENST00000519894 MARF1Q9Y4F3 1742 aaKnown RBP21.46■■□□□ 1.03
FBXO28-204ENST00000519894 NBPF8Q3BBV2 869 aa21.45■■□□□ 1.02
FBXO28-204ENST00000519894 CENPJQ9HC77 1338 aaPredicted RBP21.45■■□□□ 1.02
FBXO28-204ENST00000519894 LMOD2Q6P5Q4 547 aa21.44■■□□□ 1.02
FBXO28-204ENST00000519894 POTEHQ6S545 545 aa21.44■■□□□ 1.02
FBXO28-204ENST00000519894 NGDNQ8NEJ9 315 aaKnown RBP21.44■■□□□ 1.02
FBXO28-204ENST00000519894 TRPM3Q9HCF6 1732 aaPredicted RBP21.43■■□□□ 1.02
FBXO28-204ENST00000519894 RBM6P78332 1123 aaKnown RBP21.43■■□□□ 1.02
FBXO28-204ENST00000519894 CABLES1Q8TDN4 633 aa21.43■■□□□ 1.02
FBXO28-204ENST00000519894 GPRASP1Q5JY77 1395 aa21.43■■□□□ 1.02
FBXO28-204ENST00000519894 ARHGEF10O15013 1369 aa21.42■■□□□ 1.02
FBXO28-204ENST00000519894 ITSN1Q15811 1721 aa21.42■■□□□ 1.02
FBXO28-204ENST00000519894 CDK12Q9NYV4 1490 aaPredicted RBP21.42■■□□□ 1.02
FBXO28-204ENST00000519894 TRPC5Q9UL62 973 aaPredicted RBP21.41■■□□□ 1.02
FBXO28-204ENST00000519894 CCDC61Q9Y6R9 512 aa21.41■■□□□ 1.02
FBXO28-204ENST00000519894 BCL9LQ86UU0 1499 aa21.4■■□□□ 1.02
FBXO28-204ENST00000519894 ROCK2O75116 1388 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms