RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 NINLQ9Y2I6 1382 aa11.19□□□□□ -0.62
HMGB4-203ENST00000519684 SAFB2Q14151 953 aaKnown RBP eCLIP11.19□□□□□ -0.62
HMGB4-203ENST00000519684 MORC1Q86VD1 984 aa11.19□□□□□ -0.62
HMGB4-203ENST00000519684 ZMYM3Q14202 1370 aa11.18□□□□□ -0.62
HMGB4-203ENST00000519684 ANKRD36BQ8N2N9 1353 aa11.18□□□□□ -0.62
HMGB4-203ENST00000519684 CGNL1Q0VF96 1302 aa11.18□□□□□ -0.62
HMGB4-203ENST00000519684 SRPK2P78362 688 aaKnown RBP11.18□□□□□ -0.62
HMGB4-203ENST00000519684 NSD2O96028 1365 aa11.17□□□□□ -0.62
HMGB4-203ENST00000519684 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.17□□□□□ -0.62
HMGB4-203ENST00000519684 PRAM1Q96QH2 718 aa11.17□□□□□ -0.62
HMGB4-203ENST00000519684 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
HMGB4-203ENST00000519684 RCAN3Q9UKA8 241 aa11.17□□□□□ -0.62
HMGB4-203ENST00000519684 ATAD2Q6PL18 1390 aa11.17□□□□□ -0.62
HMGB4-203ENST00000519684 DLC1Q96QB1 1528 aa11.16□□□□□ -0.62
HMGB4-203ENST00000519684 SETD1AO15047 1707 aaKnown RBP11.16□□□□□ -0.62
HMGB4-203ENST00000519684 POLR3AO14802 1390 aaPredicted RBP11.16□□□□□ -0.62
HMGB4-203ENST00000519684 TNRQ92752 1358 aa11.16□□□□□ -0.62
HMGB4-203ENST00000519684 MINK1Q8N4C8 1332 aaPredicted RBP11.16□□□□□ -0.62
HMGB4-203ENST00000519684 HDGFP51858 240 aaKnown RBP11.15□□□□□ -0.62
HMGB4-203ENST00000519684 RRP1P56182 461 aaKnown RBP11.14□□□□□ -0.63
HMGB4-203ENST00000519684 CDCA7LQ96GN5 454 aa11.14□□□□□ -0.63
HMGB4-203ENST00000519684 B4GALNT3Q6L9W6 998 aa11.13□□□□□ -0.63
HMGB4-203ENST00000519684 CFAP53Q96M91 514 aa11.13□□□□□ -0.63
HMGB4-203ENST00000519684 TERF2IPQ9NYB0 399 aa11.13□□□□□ -0.63
HMGB4-203ENST00000519684 TNNT2P45379 298 aaPredicted RBP11.13□□□□□ -0.63
HMGB4-203ENST00000519684 NRXN3Q9Y4C0 1643 aa11.12□□□□□ -0.63
HMGB4-203ENST00000519684 UBR1Q8IWV7 1749 aa11.12□□□□□ -0.63
HMGB4-203ENST00000519684 CCDC146Q8IYE0 955 aa11.12□□□□□ -0.63
HMGB4-203ENST00000519684 A0A1W2PP64 1363 aa11.12□□□□□ -0.63
HMGB4-203ENST00000519684 SHPRHQ149N8 1683 aa11.12□□□□□ -0.63
HMGB4-203ENST00000519684 ANKRD26Q9UPS8 1709 aa11.12□□□□□ -0.63
HMGB4-203ENST00000519684 PLEKHH1Q9ULM0 1364 aa11.12□□□□□ -0.63
HMGB4-203ENST00000519684 NGEFQ8N5V2 710 aa11.12□□□□□ -0.63
HMGB4-203ENST00000519684 ABCC11Q96J66 1382 aa11.11□□□□□ -0.63
HMGB4-203ENST00000519684 GOLGA2Q08379 1002 aa11.11□□□□□ -0.63
HMGB4-203ENST00000519684 HDGFL2Q7Z4V5 671 aaPredicted RBP11.11□□□□□ -0.63
HMGB4-203ENST00000519684 CCDC136Q96JN2 1154 aa11.11□□□□□ -0.63
HMGB4-203ENST00000519684 KNDC1Q76NI1 1749 aa11.11□□□□□ -0.63
HMGB4-203ENST00000519684 CDK19Q9BWU1 502 aa11.1□□□□□ -0.63
HMGB4-203ENST00000519684 MYT1Q01538 1121 aa11.1□□□□□ -0.63
HMGB4-203ENST00000519684 KIF20BQ96Q89 1820 aa11.1□□□□□ -0.63
HMGB4-203ENST00000519684 PRKCSHP14314 528 aaPredicted RBP11.09□□□□□ -0.63
HMGB4-203ENST00000519684 ZNF521Q96K83 1311 aa11.09□□□□□ -0.63
HMGB4-203ENST00000519684 APAF1O14727 1248 aa11.09□□□□□ -0.63
HMGB4-203ENST00000519684 NLRP1Q9C000 1473 aa11.09□□□□□ -0.63
HMGB4-203ENST00000519684 TMEM2Q9UHN6 1383 aa11.09□□□□□ -0.63
HMGB4-203ENST00000519684 MTHFSP49914 203 aa11.08□□□□□ -0.64
HMGB4-203ENST00000519684 FER1L4A9Z1Z3 1794 aa11.08□□□□□ -0.64
HMGB4-203ENST00000519684 MED14O60244 1454 aa11.08□□□□□ -0.64
HMGB4-203ENST00000519684 ATP7BP35670 1465 aa11.07□□□□□ -0.64
HMGB4-203ENST00000519684 CD163L1Q9NR16 1453 aa11.07□□□□□ -0.64
HMGB4-203ENST00000519684 WAPLQ7Z5K2 1190 aa11.07□□□□□ -0.64
HMGB4-203ENST00000519684 C3P01024 1663 aa11.07□□□□□ -0.64
HMGB4-203ENST00000519684 METP08581 1390 aa11.07□□□□□ -0.64
HMGB4-203ENST00000519684 CPS1P31327 1500 aa11.07□□□□□ -0.64
HMGB4-203ENST00000519684 RUNDC1Q96C34 613 aa11.07□□□□□ -0.64
HMGB4-203ENST00000519684 FAM135BQ49AJ0 1406 aa11.06□□□□□ -0.64
HMGB4-203ENST00000519684 SLFN5Q08AF3 891 aa11.06□□□□□ -0.64
HMGB4-203ENST00000519684 DUSP27Q5VZP5 1158 aa11.06□□□□□ -0.64
HMGB4-203ENST00000519684 GGNBP2Q9H3C7 697 aa11.06□□□□□ -0.64
HMGB4-203ENST00000519684 CABP1Q9NZU7 370 aa11.06□□□□□ -0.64
HMGB4-203ENST00000519684 TECPR2O15040 1411 aa11.05□□□□□ -0.64
HMGB4-203ENST00000519684 E9PSI1 815 aa11.05□□□□□ -0.64
HMGB4-203ENST00000519684 TRHP20396 242 aaPredicted RBP11.05□□□□□ -0.64
HMGB4-203ENST00000519684 SIRT1Q96EB6 747 aa11.05□□□□□ -0.64
HMGB4-203ENST00000519684 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.04□□□□□ -0.64
HMGB4-203ENST00000519684 EXOC6Q8TAG9 804 aa11.04□□□□□ -0.64
HMGB4-203ENST00000519684 NKTRP30414 1462 aaKnown RBP11.04□□□□□ -0.64
HMGB4-203ENST00000519684 PLEKHG1Q9ULL1 1385 aa11.04□□□□□ -0.64
HMGB4-203ENST00000519684 WASLO00401 505 aaPredicted RBP11.04□□□□□ -0.64
HMGB4-203ENST00000519684 TXNDC2Q86VQ3 553 aa11.04□□□□□ -0.64
HMGB4-203ENST00000519684 RBM19Q9Y4C8 960 aaKnown RBP11.04□□□□□ -0.64
HMGB4-203ENST00000519684 IQSEC2Q5JU85 1478 aa11.04□□□□□ -0.64
HMGB4-203ENST00000519684 FYB1O15117 783 aa11.03□□□□□ -0.64
HMGB4-203ENST00000519684 EID1Q9Y6B2 187 aa11.03□□□□□ -0.64
HMGB4-203ENST00000519684 PPIP5K1Q6PFW1 1433 aa11.03□□□□□ -0.64
HMGB4-203ENST00000519684 ITSN1Q15811 1721 aa11.03□□□□□ -0.64
HMGB4-203ENST00000519684 U2AF1L5P0DN76 240 aaPredicted RBP11.02□□□□□ -0.64
HMGB4-203ENST00000519684 CEBPAP49715 358 aaPredicted RBP11.02□□□□□ -0.64
HMGB4-203ENST00000519684 U2AF1Q01081 240 aaKnown RBP eCLIP11.02□□□□□ -0.64
HMGB4-203ENST00000519684 TRMT2AQ8IZ69 625 aaKnown RBP11.02□□□□□ -0.64
HMGB4-203ENST00000519684 PLIN1O60240 522 aa11.02□□□□□ -0.65
HMGB4-203ENST00000519684 ADAMTS13Q76LX8 1427 aa11.02□□□□□ -0.65
HMGB4-203ENST00000519684 CDC42BPGQ6DT37 1551 aa11.01□□□□□ -0.65
HMGB4-203ENST00000519684 WWC1Q8IX03 1113 aa11.01□□□□□ -0.65
HMGB4-203ENST00000519684 TCP11L2Q8N4U5 519 aa11.01□□□□□ -0.65
HMGB4-203ENST00000519684 EDC4Q6P2E9 1401 aaKnown RBP11.01□□□□□ -0.65
HMGB4-203ENST00000519684 PLPPR3Q6T4P5 718 aa11.01□□□□□ -0.65
HMGB4-203ENST00000519684 DAXXQ9UER7 740 aaPredicted RBP11.01□□□□□ -0.65
HMGB4-203ENST00000519684 SLIT1O75093 1534 aa11□□□□□ -0.65
HMGB4-203ENST00000519684 COL3A1P02461 1466 aaPredicted RBP11□□□□□ -0.65
HMGB4-203ENST00000519684 U2SURPO15042 1029 aaKnown RBP11□□□□□ -0.65
HMGB4-203ENST00000519684 ADGRB2O60241 1585 aa11□□□□□ -0.65
HMGB4-203ENST00000519684 NEUROD2Q15784 382 aa11□□□□□ -0.65
HMGB4-203ENST00000519684 MON2Q7Z3U7 1717 aa11□□□□□ -0.65
HMGB4-203ENST00000519684 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11□□□□□ -0.65
HMGB4-203ENST00000519684 NUDT16Q96DE0 195 aaKnown RBP11□□□□□ -0.65
HMGB4-203ENST00000519684 CRBNQ96SW2 442 aa11□□□□□ -0.65
HMGB4-203ENST00000519684 AKAP12Q02952 1782 aa10.99□□□□□ -0.65
HMGB4-203ENST00000519684 CPSF1Q10570 1443 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms