RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 TJAP1Q5JTD0 557 aa13.13□□□□□ -0.31
PTPN12-213ENST00000519553 PPP2R2DQ66LE6 453 aa13.13□□□□□ -0.31
PTPN12-213ENST00000519553 NR1I2O75469 434 aa13.12□□□□□ -0.31
PTPN12-213ENST00000519553 RNF19BQ6ZMZ0 732 aa13.12□□□□□ -0.31
PTPN12-213ENST00000519553 SYMPKQ92797 1274 aaKnown RBP13.12□□□□□ -0.31
PTPN12-213ENST00000519553 THAP11Q96EK4 314 aa13.12□□□□□ -0.31
PTPN12-213ENST00000519553 ZBTB3Q9H5J0 574 aa13.12□□□□□ -0.31
PTPN12-213ENST00000519553 SALL2Q9Y467 1007 aaPredicted RBP13.11□□□□□ -0.31
PTPN12-213ENST00000519553 MTMR2Q13614 643 aa13.1□□□□□ -0.31
PTPN12-213ENST00000519553 Q3C1V9 767 aa13.1□□□□□ -0.31
PTPN12-213ENST00000519553 ATP1B4Q9UN42 357 aaPredicted RBP13.1□□□□□ -0.31
PTPN12-213ENST00000519553 RTL5Q5HYW3 569 aaPredicted RBP13.09□□□□□ -0.31
PTPN12-213ENST00000519553 BRICD5Q6PL45 260 aa13.09□□□□□ -0.31
PTPN12-213ENST00000519553 GTF3C3Q9Y5Q9 886 aa13.09□□□□□ -0.31
PTPN12-213ENST00000519553 C6orf229H3BNL8 230 aa13.08□□□□□ -0.32
PTPN12-213ENST00000519553 RFC5P40937 340 aa13.08□□□□□ -0.32
PTPN12-213ENST00000519553 TLL1O43897 1013 aa13.07□□□□□ -0.32
PTPN12-213ENST00000519553 ZPR1O75312 459 aa13.07□□□□□ -0.32
PTPN12-213ENST00000519553 ZNF516Q92618 1163 aa13.07□□□□□ -0.32
PTPN12-213ENST00000519553 IL21Q9HBE4 155 aa13.07□□□□□ -0.32
PTPN12-213ENST00000519553 RETREG3Q86VR2 466 aa13.06□□□□□ -0.32
PTPN12-213ENST00000519553 SPDYE5A6NIY4 337 aa13.05□□□□□ -0.32
PTPN12-213ENST00000519553 NUTM2BA6NNL0 878 aaPredicted RBP13.05□□□□□ -0.32
PTPN12-213ENST00000519553 NUTM2EB1AL46 878 aaPredicted RBP13.05□□□□□ -0.32
PTPN12-213ENST00000519553 CFAP99D6REC4 459 aa13.05□□□□□ -0.32
PTPN12-213ENST00000519553 FMNL1O95466 1100 aaPredicted RBP13.05□□□□□ -0.32
PTPN12-213ENST00000519553 NUTM2DQ5VT03 806 aaPredicted RBP13.05□□□□□ -0.32
PTPN12-213ENST00000519553 NUTM2AQ8IVF1 878 aaPredicted RBP13.05□□□□□ -0.32
PTPN12-213ENST00000519553 ITGBL1O95965 494 aaPredicted RBP13.04□□□□□ -0.32
PTPN12-213ENST00000519553 USB1Q9BQ65 265 aaKnown RBP13.03□□□□□ -0.32
PTPN12-213ENST00000519553 SPSB2Q99619 263 aa13.02□□□□□ -0.33
PTPN12-213ENST00000519553 ADH1BP00325 375 aa13.01□□□□□ -0.33
PTPN12-213ENST00000519553 PRR7Q8TB68 274 aa13.01□□□□□ -0.33
PTPN12-213ENST00000519553 FAM160A2Q8N612 972 aaPredicted RBP13□□□□□ -0.33
PTPN12-213ENST00000519553 MSS51Q4VC12 460 aa12.99□□□□□ -0.33
PTPN12-213ENST00000519553 NKX2-3Q8TAU0 364 aa12.99□□□□□ -0.33
PTPN12-213ENST00000519553 PRDM9Q9NQV7 894 aa12.98□□□□□ -0.33
PTPN12-213ENST00000519553 KCNC4Q03721 635 aa12.97□□□□□ -0.33
PTPN12-213ENST00000519553 TMEM259Q4ZIN3 620 aa12.97□□□□□ -0.33
PTPN12-213ENST00000519553 DESI1Q6ICB0 168 aa12.96□□□□□ -0.33
PTPN12-213ENST00000519553 AP1G2O75843 785 aa12.95□□□□□ -0.34
PTPN12-213ENST00000519553 CTDSPL2Q05D32 466 aa12.94□□□□□ -0.34
PTPN12-213ENST00000519553 BANK1Q8NDB2 785 aa12.94□□□□□ -0.34
PTPN12-213ENST00000519553 HELBQ8NG08 1087 aaPredicted RBP12.94□□□□□ -0.34
PTPN12-213ENST00000519553 DXOO77932 396 aaKnown RBP12.93□□□□□ -0.34
PTPN12-213ENST00000519553 USP17L8P0C7I0 530 aa12.93□□□□□ -0.34
PTPN12-213ENST00000519553 JUNDP17535 347 aa12.93□□□□□ -0.34
PTPN12-213ENST00000519553 MMP16P51512 607 aa12.93□□□□□ -0.34
PTPN12-213ENST00000519553 MCM6Q14566 821 aa12.93□□□□□ -0.34
PTPN12-213ENST00000519553 TSC1Q92574 1164 aa12.93□□□□□ -0.34
PTPN12-213ENST00000519553 PER1O15534 1290 aaPredicted RBP12.92□□□□□ -0.34
PTPN12-213ENST00000519553 SLC6A16Q9GZN6 736 aa12.91□□□□□ -0.34
PTPN12-213ENST00000519553 SNRKQ9NRH2 765 aa12.9□□□□□ -0.34
PTPN12-213ENST00000519553 S1PR4O95977 384 aa12.89□□□□□ -0.35
PTPN12-213ENST00000519553 LYPD8Q6UX82 237 aa12.89□□□□□ -0.35
PTPN12-213ENST00000519553 FLIIQ13045 1269 aa12.88□□□□□ -0.35
PTPN12-213ENST00000519553 MTMR14Q8NCE2 650 aa12.88□□□□□ -0.35
PTPN12-213ENST00000519553 LRRN4Q8WUT4 740 aa12.88□□□□□ -0.35
PTPN12-213ENST00000519553 HMX1Q9NP08 348 aaPredicted RBP12.88□□□□□ -0.35
PTPN12-213ENST00000519553 PTPRNQ16849 979 aa12.87□□□□□ -0.35
PTPN12-213ENST00000519553 SOCS7O14512 581 aa12.86□□□□□ -0.35
PTPN12-213ENST00000519553 IFFO2Q5TF58 517 aa12.86□□□□□ -0.35
PTPN12-213ENST00000519553 GJD4Q96KN9 370 aaPredicted RBP12.84□□□□□ -0.35
PTPN12-213ENST00000519553 F12P00748 615 aaPredicted RBP12.83□□□□□ -0.36
PTPN12-213ENST00000519553 NUDT12Q9BQG2 462 aa12.82□□□□□ -0.36
PTPN12-213ENST00000519553 TRIM34Q9BYJ4 488 aa12.82□□□□□ -0.36
PTPN12-213ENST00000519553 PLA2G2EQ9NZK7 142 aa12.82□□□□□ -0.36
PTPN12-213ENST00000519553 CCNYL3P0C7X3 344 aa12.81□□□□□ -0.36
PTPN12-213ENST00000519553 RNF223E7ERA6 249 aa12.8□□□□□ -0.36
PTPN12-213ENST00000519553 PPEF1O14829 653 aaPredicted RBP12.8□□□□□ -0.36
PTPN12-213ENST00000519553 PPP1R18Q6NYC8 613 aa12.8□□□□□ -0.36
PTPN12-213ENST00000519553 EPS8L1Q8TE68 723 aa12.8□□□□□ -0.36
PTPN12-213ENST00000519553 MAP10Q9P2G4 905 aa12.8□□□□□ -0.36
PTPN12-213ENST00000519553 FCF1Q9Y324 198 aaKnown RBP12.8□□□□□ -0.36
PTPN12-213ENST00000519553 EVA1BQ9NVM1 165 aa12.78□□□□□ -0.36
PTPN12-213ENST00000519553 GPR37L1O60883 481 aa12.77□□□□□ -0.37
PTPN12-213ENST00000519553 NR6A1Q15406 480 aa12.77□□□□□ -0.37
PTPN12-213ENST00000519553 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.77□□□□□ -0.37
PTPN12-213ENST00000519553 TIMELESSQ9UNS1 1208 aa12.77□□□□□ -0.37
PTPN12-213ENST00000519553 ANKLE1Q8NAG6 615 aa12.76□□□□□ -0.37
PTPN12-213ENST00000519553 POM121Q96HA1 1249 aa12.76□□□□□ -0.37
PTPN12-213ENST00000519553 GGCXP38435 758 aa12.75□□□□□ -0.37
PTPN12-213ENST00000519553 KCNH2Q12809 1159 aa12.75□□□□□ -0.37
PTPN12-213ENST00000519553 PLA2G2CQ5R387 149 aa12.75□□□□□ -0.37
PTPN12-213ENST00000519553 UBTFP17480 764 aaKnown RBP12.74□□□□□ -0.37
PTPN12-213ENST00000519553 PTCRAQ6ISU1 281 aaPredicted RBP12.74□□□□□ -0.37
PTPN12-213ENST00000519553 CCDC24Q8N4L8 307 aa12.74□□□□□ -0.37
PTPN12-213ENST00000519553 A0A0G2JS52 829 aa12.73□□□□□ -0.37
PTPN12-213ENST00000519553 COG6Q9Y2V7 657 aa12.73□□□□□ -0.37
PTPN12-213ENST00000519553 APBB1O00213 710 aa12.72□□□□□ -0.37
PTPN12-213ENST00000519553 CTHP32929 405 aa12.72□□□□□ -0.37
PTPN12-213ENST00000519553 C14orf37Q86TY3 774 aa12.72□□□□□ -0.37
PTPN12-213ENST00000519553 TBC1D2BQ9UPU7 963 aa12.72□□□□□ -0.37
PTPN12-213ENST00000519553 CLUAP1Q96AJ1 413 aa12.71□□□□□ -0.37
PTPN12-213ENST00000519553 NDUFB9Q9Y6M9 179 aa12.71□□□□□ -0.37
PTPN12-213ENST00000519553 UNC93B1Q9H1C4 597 aa12.7□□□□□ -0.38
PTPN12-213ENST00000519553 GDPD2Q9HCC8 539 aa12.7□□□□□ -0.38
PTPN12-213ENST00000519553 EMID1Q96A84 441 aaPredicted RBP12.69□□□□□ -0.38
PTPN12-213ENST00000519553 FKBPLQ9UIM3 349 aa12.67□□□□□ -0.38
PTPN12-213ENST00000519553 A6NJR5 290 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms