RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 PLEKHH1Q9ULM0 1364 aa31.2■■■□□ 2.59
ARFGEF1-206ENST00000519436 LRP6O75581 1613 aa31.2■■■□□ 2.58
ARFGEF1-206ENST00000519436 NHSL1Q5SYE7 1610 aa31.19■■■□□ 2.58
ARFGEF1-206ENST00000519436 SHPRHQ149N8 1683 aa31.16■■■□□ 2.58
ARFGEF1-206ENST00000519436 SOS2Q07890 1332 aaPredicted RBP31.15■■■□□ 2.58
ARFGEF1-206ENST00000519436 DHX57Q6P158 1386 aaKnown RBP31.15■■■□□ 2.58
ARFGEF1-206ENST00000519436 DCAF11Q8TEB1 546 aa31.13■■■□□ 2.57
ARFGEF1-206ENST00000519436 CDC42BPGQ6DT37 1551 aa31.13■■■□□ 2.57
ARFGEF1-206ENST00000519436 STAC3Q96MF2 364 aa31.12■■■□□ 2.57
ARFGEF1-206ENST00000519436 KNDC1Q76NI1 1749 aa31.12■■■□□ 2.57
ARFGEF1-206ENST00000519436 LAMC1P11047 1609 aa31.11■■■□□ 2.57
ARFGEF1-206ENST00000519436 KDM2AQ9Y2K7 1162 aa31.11■■■□□ 2.57
ARFGEF1-206ENST00000519436 PNPLA6Q8IY17 1366 aa31.1■■■□□ 2.57
ARFGEF1-206ENST00000519436 ESCO1Q5FWF5 840 aa31.09■■■□□ 2.57
ARFGEF1-206ENST00000519436 NUTM2BA6NNL0 878 aaPredicted RBP31.08■■■□□ 2.57
ARFGEF1-206ENST00000519436 NUTM2EB1AL46 878 aaPredicted RBP31.08■■■□□ 2.57
ARFGEF1-206ENST00000519436 NUTM2AQ8IVF1 878 aaPredicted RBP31.08■■■□□ 2.57
ARFGEF1-206ENST00000519436 MEX3CQ5U5Q3 659 aaKnown RBP31.07■■■□□ 2.56
ARFGEF1-206ENST00000519436 NUTM2FA1L443 756 aa31.05■■■□□ 2.56
ARFGEF1-206ENST00000519436 ADGRB1O14514 1584 aa31.05■■■□□ 2.56
ARFGEF1-206ENST00000519436 PRAM1Q96QH2 718 aa31.04■■■□□ 2.56
ARFGEF1-206ENST00000519436 NPHP3Q7Z494 1330 aa31.01■■■□□ 2.56
ARFGEF1-206ENST00000519436 FOXO3O43524 673 aa31.01■■■□□ 2.55
ARFGEF1-206ENST00000519436 ZNF772Q68DY9 489 aaPredicted RBP31.01■■■□□ 2.55
ARFGEF1-206ENST00000519436 DLC1Q96QB1 1528 aa31■■■□□ 2.55
ARFGEF1-206ENST00000519436 SAFB2Q14151 953 aaKnown RBP eCLIP30.98■■■□□ 2.55
ARFGEF1-206ENST00000519436 TRAK1Q9UPV9 953 aa30.97■■■□□ 2.55
ARFGEF1-206ENST00000519436 PXDNQ92626 1479 aa30.96■■■□□ 2.55
ARFGEF1-206ENST00000519436 POGKQ9P215 609 aa30.96■■■□□ 2.55
ARFGEF1-206ENST00000519436 XPCQ01831 940 aaPredicted RBP30.94■■■□□ 2.54
ARFGEF1-206ENST00000519436 FMN2Q9NZ56 1722 aa30.94■■■□□ 2.54
ARFGEF1-206ENST00000519436 AFF2P51816 1311 aa30.93■■■□□ 2.54
ARFGEF1-206ENST00000519436 C8orf37Q96NL8 207 aa30.9■■■□□ 2.54
ARFGEF1-206ENST00000519436 ADAMTS2O95450 1211 aa30.89■■■□□ 2.54
ARFGEF1-206ENST00000519436 PHF8Q9UPP1 1060 aa30.88■■■□□ 2.53
ARFGEF1-206ENST00000519436 KRT28Q7Z3Y7 464 aa30.85■■■□□ 2.53
ARFGEF1-206ENST00000519436 HIRIP3Q9BW71 556 aaPredicted RBP30.85■■■□□ 2.53
ARFGEF1-206ENST00000519436 SPATA31A3Q5VYP0 1347 aa30.84■■■□□ 2.53
ARFGEF1-206ENST00000519436 RXRBP28702 533 aa30.84■■■□□ 2.53
ARFGEF1-206ENST00000519436 NGLY1Q96IV0 654 aa30.84■■■□□ 2.53
ARFGEF1-206ENST00000519436 COL22A1Q8NFW1 1626 aaPredicted RBP30.84■■■□□ 2.53
ARFGEF1-206ENST00000519436 MINK1Q8N4C8 1332 aaPredicted RBP30.83■■■□□ 2.53
ARFGEF1-206ENST00000519436 ANKARQ7Z5J8 1434 aa30.82■■■□□ 2.52
ARFGEF1-206ENST00000519436 ADGRB2O60241 1585 aa30.82■■■□□ 2.52
ARFGEF1-206ENST00000519436 WASLO00401 505 aaPredicted RBP30.81■■■□□ 2.52
ARFGEF1-206ENST00000519436 FNBP4Q8N3X1 1017 aaPredicted RBP30.81■■■□□ 2.52
ARFGEF1-206ENST00000519436 QTRT2Q9H974 415 aaKnown RBP30.81■■■□□ 2.52
ARFGEF1-206ENST00000519436 NBPF1Q3BBV0 1214 aa30.8■■■□□ 2.52
ARFGEF1-206ENST00000519436 PRR36Q9H6K5 1346 aa30.79■■■□□ 2.52
ARFGEF1-206ENST00000519436 KIF1AQ12756 1690 aa30.79■■■□□ 2.52
ARFGEF1-206ENST00000519436 SIN3AQ96ST3 1273 aa30.78■■■□□ 2.52
ARFGEF1-206ENST00000519436 PSME1Q06323 249 aa30.77■■■□□ 2.52
ARFGEF1-206ENST00000519436 PMFBP1Q8TBY8 1022 aa30.77■■■□□ 2.52
ARFGEF1-206ENST00000519436 L3MBTL2Q969R5 705 aa30.77■■■□□ 2.52
ARFGEF1-206ENST00000519436 RGPD8O14715 1765 aaPredicted RBP30.77■■■□□ 2.52
ARFGEF1-206ENST00000519436 USP32Q8NFA0 1604 aa30.76■■■□□ 2.52
ARFGEF1-206ENST00000519436 RBM6P78332 1123 aaKnown RBP30.74■■■□□ 2.51
ARFGEF1-206ENST00000519436 CDK12Q9NYV4 1490 aaPredicted RBP30.74■■■□□ 2.51
ARFGEF1-206ENST00000519436 USP21Q9UK80 565 aa30.73■■■□□ 2.51
ARFGEF1-206ENST00000519436 SBNO1A3KN83 1393 aa30.73■■■□□ 2.51
ARFGEF1-206ENST00000519436 EIF3AQ14152 1382 aaKnown RBP30.72■■■□□ 2.51
ARFGEF1-206ENST00000519436 KIAA1210Q9ULL0 1709 aa30.7■■■□□ 2.51
ARFGEF1-206ENST00000519436 TULP4Q9NRJ4 1543 aa30.7■■■□□ 2.51
ARFGEF1-206ENST00000519436 TNS3Q68CZ2 1445 aa30.7■■■□□ 2.5
ARFGEF1-206ENST00000519436 ARHGEF28Q8N1W1 1705 aaKnown RBP30.69■■■□□ 2.5
ARFGEF1-206ENST00000519436 TRPC5Q9UL62 973 aaPredicted RBP30.67■■■□□ 2.5
ARFGEF1-206ENST00000519436 BCL9LQ86UU0 1499 aa30.66■■■□□ 2.5
ARFGEF1-206ENST00000519436 NUDT16Q96DE0 195 aaKnown RBP30.66■■■□□ 2.5
ARFGEF1-206ENST00000519436 CDK19Q9BWU1 502 aa30.66■■■□□ 2.5
ARFGEF1-206ENST00000519436 NEUROD1Q13562 356 aa30.65■■■□□ 2.5
ARFGEF1-206ENST00000519436 CABLES1Q8TDN4 633 aa30.64■■■□□ 2.5
ARFGEF1-206ENST00000519436 ATRNO75882 1429 aa30.64■■■□□ 2.49
ARFGEF1-206ENST00000519436 ARHGEF10O15013 1369 aa30.63■■■□□ 2.49
ARFGEF1-206ENST00000519436 RGS12O14924 1447 aa30.62■■■□□ 2.49
ARFGEF1-206ENST00000519436 UPF1Q92900 1129 aaKnown RBP eCLIP30.61■■■□□ 2.49
ARFGEF1-206ENST00000519436 ATP7BP35670 1465 aa30.61■■■□□ 2.49
ARFGEF1-206ENST00000519436 GPRASP1Q5JY77 1395 aa30.6■■■□□ 2.49
ARFGEF1-206ENST00000519436 LMOD2Q6P5Q4 547 aa30.6■■■□□ 2.49
ARFGEF1-206ENST00000519436 NGDNQ8NEJ9 315 aaKnown RBP30.59■■■□□ 2.49
ARFGEF1-206ENST00000519436 SLIT2O94813 1529 aa30.57■■■□□ 2.49
ARFGEF1-206ENST00000519436 TRIM26Q12899 539 aaPredicted RBP30.57■■■□□ 2.48
ARFGEF1-206ENST00000519436 CCDC61Q9Y6R9 512 aa30.57■■■□□ 2.48
ARFGEF1-206ENST00000519436 CENPJQ9HC77 1338 aaPredicted RBP30.56■■■□□ 2.48
ARFGEF1-206ENST00000519436 UNC5CLQ8IV45 518 aa30.56■■■□□ 2.48
ARFGEF1-206ENST00000519436 TRPM3Q9HCF6 1732 aaPredicted RBP30.55■■■□□ 2.48
ARFGEF1-206ENST00000519436 MARF1Q9Y4F3 1742 aaKnown RBP30.55■■■□□ 2.48
ARFGEF1-206ENST00000519436 PLEKHG3A1L390 1219 aa30.54■■■□□ 2.48
ARFGEF1-206ENST00000519436 PLEKHG5O94827 1062 aa30.53■■■□□ 2.48
ARFGEF1-206ENST00000519436 GJD4Q96KN9 370 aaPredicted RBP30.53■■■□□ 2.48
ARFGEF1-206ENST00000519436 HAP1P54257 671 aaPredicted RBP30.52■■■□□ 2.48
ARFGEF1-206ENST00000519436 NBPF8Q3BBV2 869 aa30.51■■■□□ 2.47
ARFGEF1-206ENST00000519436 POLR3AO14802 1390 aaPredicted RBP30.51■■■□□ 2.47
ARFGEF1-206ENST00000519436 FAM83GA6ND36 823 aa30.5■■■□□ 2.47
ARFGEF1-206ENST00000519436 ACEP12821 1306 aa30.48■■■□□ 2.47
ARFGEF1-206ENST00000519436 ALS2Q96Q42 1657 aa30.48■■■□□ 2.47
ARFGEF1-206ENST00000519436 PAK3O75914 559 aaPredicted RBP30.47■■■□□ 2.47
ARFGEF1-206ENST00000519436 CABP2Q9NPB3 220 aa30.46■■■□□ 2.47
ARFGEF1-206ENST00000519436 TRPM1Q7Z4N2 1603 aa30.45■■■□□ 2.47
ARFGEF1-206ENST00000519436 SRPK2P78362 688 aaKnown RBP30.45■■■□□ 2.47
ARFGEF1-206ENST00000519436 ROCK2O75116 1388 aaKnown RBP30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms