RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 RBM6P78332 1123 aaKnown RBP13.22□□□□□ -0.29
TRIM35-202ENST00000519219 NGLY1Q96IV0 654 aa13.22□□□□□ -0.29
TRIM35-202ENST00000519219 PXDNQ92626 1479 aa13.21□□□□□ -0.3
TRIM35-202ENST00000519219 RPGRIP1LQ68CZ1 1315 aa13.2□□□□□ -0.3
TRIM35-202ENST00000519219 XPCQ01831 940 aaPredicted RBP13.2□□□□□ -0.3
TRIM35-202ENST00000519219 MYOM2P54296 1465 aa13.2□□□□□ -0.3
TRIM35-202ENST00000519219 RGPD8O14715 1765 aaPredicted RBP13.2□□□□□ -0.3
TRIM35-202ENST00000519219 PLEKHH1Q9ULM0 1364 aa13.2□□□□□ -0.3
TRIM35-202ENST00000519219 KNDC1Q76NI1 1749 aa13.19□□□□□ -0.3
TRIM35-202ENST00000519219 NUTM2FA1L443 756 aa13.19□□□□□ -0.3
TRIM35-202ENST00000519219 WAPLQ7Z5K2 1190 aa13.19□□□□□ -0.3
TRIM35-202ENST00000519219 STK26Q9P289 416 aa13.19□□□□□ -0.3
TRIM35-202ENST00000519219 SPATA31E1Q6ZUB1 1445 aa13.19□□□□□ -0.3
TRIM35-202ENST00000519219 FMN2Q9NZ56 1722 aa13.19□□□□□ -0.3
TRIM35-202ENST00000519219 USP21Q9UK80 565 aa13.18□□□□□ -0.3
TRIM35-202ENST00000519219 ATRNO75882 1429 aa13.18□□□□□ -0.3
TRIM35-202ENST00000519219 RGL3Q3MIN7 710 aa13.17□□□□□ -0.3
TRIM35-202ENST00000519219 ESCO1Q5FWF5 840 aa13.17□□□□□ -0.3
TRIM35-202ENST00000519219 TECPR2O15040 1411 aa13.16□□□□□ -0.3
TRIM35-202ENST00000519219 TMEM132EQ6IEE7 984 aa13.16□□□□□ -0.3
TRIM35-202ENST00000519219 BCL9LQ86UU0 1499 aa13.16□□□□□ -0.3
TRIM35-202ENST00000519219 CCDC144AA2RUR9 1427 aa13.15□□□□□ -0.3
TRIM35-202ENST00000519219 FOXO3O43524 673 aa13.15□□□□□ -0.3
TRIM35-202ENST00000519219 FNBP4Q8N3X1 1017 aaPredicted RBP13.15□□□□□ -0.3
TRIM35-202ENST00000519219 LRPPRCP42704 1394 aaKnown RBP13.15□□□□□ -0.3
TRIM35-202ENST00000519219 PIK3C2GO75747 1445 aa13.14□□□□□ -0.31
TRIM35-202ENST00000519219 EP400Q96L91 3159 aa13.14□□□□□ -0.31
TRIM35-202ENST00000519219 TRPC5Q9UL62 973 aaPredicted RBP13.14□□□□□ -0.31
TRIM35-202ENST00000519219 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
TRIM35-202ENST00000519219 BRWD3Q6RI45 1802 aa13.13□□□□□ -0.31
TRIM35-202ENST00000519219 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.13□□□□□ -0.31
TRIM35-202ENST00000519219 GLI3P10071 1580 aa13.12□□□□□ -0.31
TRIM35-202ENST00000519219 ATAD2Q6PL18 1390 aa13.12□□□□□ -0.31
TRIM35-202ENST00000519219 MPHOSPH9Q99550 1183 aa13.12□□□□□ -0.31
TRIM35-202ENST00000519219 YTHDC2Q9H6S0 1430 aaKnown RBP13.12□□□□□ -0.31
TRIM35-202ENST00000519219 KIF1AQ12756 1690 aa13.12□□□□□ -0.31
TRIM35-202ENST00000519219 ABCA3Q99758 1704 aa13.11□□□□□ -0.31
TRIM35-202ENST00000519219 ABCC11Q96J66 1382 aa13.11□□□□□ -0.31
TRIM35-202ENST00000519219 USP32Q8NFA0 1604 aa13.11□□□□□ -0.31
TRIM35-202ENST00000519219 ANKRD30BQ9BXX2 1392 aa13.1□□□□□ -0.31
TRIM35-202ENST00000519219 PLCH1Q4KWH8 1693 aa13.08□□□□□ -0.31
TRIM35-202ENST00000519219 SLIT2O94813 1529 aa13.08□□□□□ -0.31
TRIM35-202ENST00000519219 SRCAPQ6ZRS2 3230 aa13.08□□□□□ -0.32
TRIM35-202ENST00000519219 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
TRIM35-202ENST00000519219 RALGAPBQ86X10 1494 aa13.08□□□□□ -0.32
TRIM35-202ENST00000519219 NRXN1Q9ULB1 1477 aa13.08□□□□□ -0.32
TRIM35-202ENST00000519219 SPATA31A3Q5VYP0 1347 aa13.08□□□□□ -0.32
TRIM35-202ENST00000519219 CFAP70Q5T0N1 1121 aa13.07□□□□□ -0.32
TRIM35-202ENST00000519219 GJD4Q96KN9 370 aaPredicted RBP13.07□□□□□ -0.32
TRIM35-202ENST00000519219 SAFB2Q14151 953 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRIM35-202ENST00000519219 KRT28Q7Z3Y7 464 aa13.06□□□□□ -0.32
TRIM35-202ENST00000519219 CABLES1Q8TDN4 633 aa13.06□□□□□ -0.32
TRIM35-202ENST00000519219 C14orf93Q9H972 538 aaKnown RBP13.05□□□□□ -0.32
TRIM35-202ENST00000519219 TNS3Q68CZ2 1445 aa13.05□□□□□ -0.32
TRIM35-202ENST00000519219 UNC5CLQ8IV45 518 aa13.04□□□□□ -0.32
TRIM35-202ENST00000519219 TRPM3Q9HCF6 1732 aaPredicted RBP13.04□□□□□ -0.32
TRIM35-202ENST00000519219 NWD2Q9ULI1 1742 aa13.03□□□□□ -0.32
TRIM35-202ENST00000519219 PRAM1Q96QH2 718 aa13.03□□□□□ -0.32
TRIM35-202ENST00000519219 PHF8Q9UPP1 1060 aa13.03□□□□□ -0.32
TRIM35-202ENST00000519219 ADGRB1O14514 1584 aa13.03□□□□□ -0.32
TRIM35-202ENST00000519219 NRAPQ86VF7 1730 aa13.02□□□□□ -0.32
TRIM35-202ENST00000519219 ADGRB2O60241 1585 aa13.02□□□□□ -0.33
TRIM35-202ENST00000519219 SIRT1Q96EB6 747 aa13.01□□□□□ -0.33
TRIM35-202ENST00000519219 CRYBG1Q9Y4K1 1723 aa13□□□□□ -0.33
TRIM35-202ENST00000519219 ALS2Q96Q42 1657 aa13□□□□□ -0.33
TRIM35-202ENST00000519219 DLC1Q96QB1 1528 aa13□□□□□ -0.33
TRIM35-202ENST00000519219 DHX57Q6P158 1386 aaKnown RBP13□□□□□ -0.33
TRIM35-202ENST00000519219 PMFBP1Q8TBY8 1022 aa13□□□□□ -0.33
TRIM35-202ENST00000519219 SBNO1A3KN83 1393 aa12.99□□□□□ -0.33
TRIM35-202ENST00000519219 LMOD2Q6P5Q4 547 aa12.99□□□□□ -0.33
TRIM35-202ENST00000519219 DEFB132Q7Z7B7 95 aa12.99□□□□□ -0.33
TRIM35-202ENST00000519219 HIRIP3Q9BW71 556 aaPredicted RBP12.99□□□□□ -0.33
TRIM35-202ENST00000519219 ZRANB1Q9UGI0 708 aa12.99□□□□□ -0.33
TRIM35-202ENST00000519219 RAB3GAP2Q9H2M9 1393 aa12.98□□□□□ -0.33
TRIM35-202ENST00000519219 PRR36Q9H6K5 1346 aa12.98□□□□□ -0.33
TRIM35-202ENST00000519219 HAP1P54257 671 aaPredicted RBP12.98□□□□□ -0.33
TRIM35-202ENST00000519219 SEPT12Q8IYM1 358 aa12.98□□□□□ -0.33
TRIM35-202ENST00000519219 BLMP54132 1417 aaPredicted RBP12.97□□□□□ -0.33
TRIM35-202ENST00000519219 ANKARQ7Z5J8 1434 aa12.97□□□□□ -0.33
TRIM35-202ENST00000519219 FAM83GA6ND36 823 aa12.97□□□□□ -0.33
TRIM35-202ENST00000519219 VPS72Q15906 364 aa12.97□□□□□ -0.33
TRIM35-202ENST00000519219 MINK1Q8N4C8 1332 aaPredicted RBP12.96□□□□□ -0.33
TRIM35-202ENST00000519219 PSME1Q06323 249 aa12.96□□□□□ -0.33
TRIM35-202ENST00000519219 CCDC125Q86Z20 511 aa12.96□□□□□ -0.33
TRIM35-202ENST00000519219 POGKQ9P215 609 aa12.96□□□□□ -0.33
TRIM35-202ENST00000519219 TRAK1Q9UPV9 953 aa12.96□□□□□ -0.33
TRIM35-202ENST00000519219 CCDC9Q9Y3X0 531 aaKnown RBP12.96□□□□□ -0.33
TRIM35-202ENST00000519219 ARHGEF28Q8N1W1 1705 aaKnown RBP12.96□□□□□ -0.34
TRIM35-202ENST00000519219 ARHGEF10O15013 1369 aa12.95□□□□□ -0.34
TRIM35-202ENST00000519219 COL14A1Q05707 1796 aaKnown RBP12.94□□□□□ -0.34
TRIM35-202ENST00000519219 TULP4Q9NRJ4 1543 aa12.94□□□□□ -0.34
TRIM35-202ENST00000519219 KDM2AQ9Y2K7 1162 aa12.94□□□□□ -0.34
TRIM35-202ENST00000519219 ONECUT3O60422 494 aaPredicted RBP12.93□□□□□ -0.34
TRIM35-202ENST00000519219 ACIN1Q9UKV3 1341 aaKnown RBP12.92□□□□□ -0.34
TRIM35-202ENST00000519219 FAM98CQ17RN3 349 aaKnown RBP12.92□□□□□ -0.34
TRIM35-202ENST00000519219 FAM182BQ5T319 152 aa12.92□□□□□ -0.34
TRIM35-202ENST00000519219 KRT27Q7Z3Y8 459 aa12.92□□□□□ -0.34
TRIM35-202ENST00000519219 DCAF11Q8TEB1 546 aa12.91□□□□□ -0.34
TRIM35-202ENST00000519219 BTG4Q9NY30 223 aa12.91□□□□□ -0.34
TRIM35-202ENST00000519219 THSD7AQ9UPZ6 1657 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms