RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 ADGRB1O14514 1584 aa10.92□□□□□ -0.66
SDCBP-206ENST00000519115 C14orf93Q9H972 538 aaKnown RBP10.92□□□□□ -0.66
SDCBP-206ENST00000519115 KIAA1210Q9ULL0 1709 aa10.92□□□□□ -0.66
SDCBP-206ENST00000519115 TECPR2O15040 1411 aa10.92□□□□□ -0.66
SDCBP-206ENST00000519115 ARHGEF28Q8N1W1 1705 aaKnown RBP10.9□□□□□ -0.66
SDCBP-206ENST00000519115 HSPA1LP34931 641 aa10.9□□□□□ -0.66
SDCBP-206ENST00000519115 C19orf44Q9H6X5 657 aa10.9□□□□□ -0.66
SDCBP-206ENST00000519115 DCCP43146 1447 aa10.9□□□□□ -0.66
SDCBP-206ENST00000519115 ABCC11Q96J66 1382 aa10.9□□□□□ -0.67
SDCBP-206ENST00000519115 PLEKHH1Q9ULM0 1364 aa10.9□□□□□ -0.67
SDCBP-206ENST00000519115 ATF3P18847 181 aa10.89□□□□□ -0.67
SDCBP-206ENST00000519115 L3MBTL2Q969R5 705 aa10.89□□□□□ -0.67
SDCBP-206ENST00000519115 PHLPP1O60346 1717 aa10.89□□□□□ -0.67
SDCBP-206ENST00000519115 TRPM1Q7Z4N2 1603 aa10.88□□□□□ -0.67
SDCBP-206ENST00000519115 MST1RQ04912 1400 aa10.88□□□□□ -0.67
SDCBP-206ENST00000519115 CDC42BPGQ6DT37 1551 aa10.88□□□□□ -0.67
SDCBP-206ENST00000519115 WAPLQ7Z5K2 1190 aa10.88□□□□□ -0.67
SDCBP-206ENST00000519115 CADPS2Q86UW7 1296 aa10.88□□□□□ -0.67
SDCBP-206ENST00000519115 STAC3Q96MF2 364 aa10.88□□□□□ -0.67
SDCBP-206ENST00000519115 SLAIN2Q9P270 581 aa10.88□□□□□ -0.67
SDCBP-206ENST00000519115 DLC1Q96QB1 1528 aa10.88□□□□□ -0.67
SDCBP-206ENST00000519115 FAM135BQ49AJ0 1406 aa10.87□□□□□ -0.67
SDCBP-206ENST00000519115 SAFB2Q14151 953 aaKnown RBP eCLIP10.87□□□□□ -0.67
SDCBP-206ENST00000519115 RGPD8O14715 1765 aaPredicted RBP10.87□□□□□ -0.67
SDCBP-206ENST00000519115 FMN2Q9NZ56 1722 aa10.87□□□□□ -0.67
SDCBP-206ENST00000519115 TRAK1Q9UPV9 953 aa10.86□□□□□ -0.67
SDCBP-206ENST00000519115 TONSLQ96HA7 1378 aa10.86□□□□□ -0.67
SDCBP-206ENST00000519115 PRAM1Q96QH2 718 aa10.85□□□□□ -0.67
SDCBP-206ENST00000519115 COL16A1Q07092 1604 aaPredicted RBP10.84□□□□□ -0.67
SDCBP-206ENST00000519115 NHSL1Q5SYE7 1610 aa10.84□□□□□ -0.67
SDCBP-206ENST00000519115 DCAF8L1A6NGE4 600 aa10.84□□□□□ -0.67
SDCBP-206ENST00000519115 NBPF1Q3BBV0 1214 aa10.84□□□□□ -0.67
SDCBP-206ENST00000519115 AHDC1Q5TGY3 1603 aaPredicted RBP10.84□□□□□ -0.67
SDCBP-206ENST00000519115 ADGRB2O60241 1585 aa10.83□□□□□ -0.68
SDCBP-206ENST00000519115 C1orf167Q5SNV9 1468 aa10.83□□□□□ -0.68
SDCBP-206ENST00000519115 POGKQ9P215 609 aa10.83□□□□□ -0.68
SDCBP-206ENST00000519115 QRICH2Q9H0J4 1663 aa10.82□□□□□ -0.68
SDCBP-206ENST00000519115 NUTM2FA1L443 756 aa10.82□□□□□ -0.68
SDCBP-206ENST00000519115 BRINP3Q76B58 766 aa10.82□□□□□ -0.68
SDCBP-206ENST00000519115 MINK1Q8N4C8 1332 aaPredicted RBP10.82□□□□□ -0.68
SDCBP-206ENST00000519115 USP32Q8NFA0 1604 aa10.81□□□□□ -0.68
SDCBP-206ENST00000519115 NBPF8Q3BBV2 869 aa10.81□□□□□ -0.68
SDCBP-206ENST00000519115 SIRT1Q96EB6 747 aa10.81□□□□□ -0.68
SDCBP-206ENST00000519115 HIRIP3Q9BW71 556 aaPredicted RBP10.81□□□□□ -0.68
SDCBP-206ENST00000519115 ROCK2O75116 1388 aaKnown RBP10.8□□□□□ -0.68
SDCBP-206ENST00000519115 DDX17Q92841 729 aaKnown RBP10.8□□□□□ -0.68
SDCBP-206ENST00000519115 ORAI2Q96SN7 254 aa10.8□□□□□ -0.68
SDCBP-206ENST00000519115 MED1Q15648 1581 aaPredicted RBP10.8□□□□□ -0.68
SDCBP-206ENST00000519115 RALGAPBQ86X10 1494 aa10.79□□□□□ -0.68
SDCBP-206ENST00000519115 KIF1AQ12756 1690 aa10.79□□□□□ -0.68
SDCBP-206ENST00000519115 SHPRHQ149N8 1683 aa10.78□□□□□ -0.68
SDCBP-206ENST00000519115 ITSN1Q15811 1721 aa10.78□□□□□ -0.68
SDCBP-206ENST00000519115 ESCO1Q5FWF5 840 aa10.77□□□□□ -0.69
SDCBP-206ENST00000519115 TULP4Q9NRJ4 1543 aa10.77□□□□□ -0.69
SDCBP-206ENST00000519115 GPRASP1Q5JY77 1395 aa10.76□□□□□ -0.69
SDCBP-206ENST00000519115 XPCQ01831 940 aaPredicted RBP10.75□□□□□ -0.69
SDCBP-206ENST00000519115 CENPJQ9HC77 1338 aaPredicted RBP10.75□□□□□ -0.69
SDCBP-206ENST00000519115 TOPAZ1Q8N9V7 1692 aa10.75□□□□□ -0.69
SDCBP-206ENST00000519115 JCADQ9P266 1359 aa10.75□□□□□ -0.69
SDCBP-206ENST00000519115 ANKARQ7Z5J8 1434 aa10.75□□□□□ -0.69
SDCBP-206ENST00000519115 WASLO00401 505 aaPredicted RBP10.74□□□□□ -0.69
SDCBP-206ENST00000519115 PRR36Q9H6K5 1346 aa10.74□□□□□ -0.69
SDCBP-206ENST00000519115 ATP7BP35670 1465 aa10.74□□□□□ -0.69
SDCBP-206ENST00000519115 PXDNQ92626 1479 aa10.74□□□□□ -0.69
SDCBP-206ENST00000519115 FOXO3O43524 673 aa10.73□□□□□ -0.69
SDCBP-206ENST00000519115 CARD11Q9BXL7 1154 aa10.73□□□□□ -0.69
SDCBP-206ENST00000519115 RNF39Q9H2S5 420 aa10.73□□□□□ -0.69
SDCBP-206ENST00000519115 NPHP3Q7Z494 1330 aa10.73□□□□□ -0.69
SDCBP-206ENST00000519115 EIF3AQ14152 1382 aaKnown RBP10.73□□□□□ -0.69
SDCBP-206ENST00000519115 PHF8Q9UPP1 1060 aa10.72□□□□□ -0.69
SDCBP-206ENST00000519115 LRP6O75581 1613 aa10.72□□□□□ -0.69
SDCBP-206ENST00000519115 SOS2Q07890 1332 aaPredicted RBP10.71□□□□□ -0.69
SDCBP-206ENST00000519115 PNPLA6Q8IY17 1366 aa10.71□□□□□ -0.69
SDCBP-206ENST00000519115 PMFBP1Q8TBY8 1022 aa10.71□□□□□ -0.69
SDCBP-206ENST00000519115 CDK19Q9BWU1 502 aa10.71□□□□□ -0.69
SDCBP-206ENST00000519115 TRPM3Q9HCF6 1732 aaPredicted RBP10.71□□□□□ -0.69
SDCBP-206ENST00000519115 LRRC59Q96AG4 307 aaKnown RBP10.7□□□□□ -0.7
SDCBP-206ENST00000519115 COL22A1Q8NFW1 1626 aaPredicted RBP10.69□□□□□ -0.7
SDCBP-206ENST00000519115 NUTM2BA6NNL0 878 aaPredicted RBP10.69□□□□□ -0.7
SDCBP-206ENST00000519115 NUTM2EB1AL46 878 aaPredicted RBP10.69□□□□□ -0.7
SDCBP-206ENST00000519115 SRPK2P78362 688 aaKnown RBP10.69□□□□□ -0.7
SDCBP-206ENST00000519115 NUTM2AQ8IVF1 878 aaPredicted RBP10.69□□□□□ -0.7
SDCBP-206ENST00000519115 NUDT16Q96DE0 195 aaKnown RBP10.69□□□□□ -0.7
SDCBP-206ENST00000519115 ABCA3Q99758 1704 aa10.69□□□□□ -0.7
SDCBP-206ENST00000519115 SPATA31A6Q5VVP1 1343 aa10.68□□□□□ -0.7
SDCBP-206ENST00000519115 MARF1Q9Y4F3 1742 aaKnown RBP10.68□□□□□ -0.7
SDCBP-206ENST00000519115 KRT28Q7Z3Y7 464 aa10.68□□□□□ -0.7
SDCBP-206ENST00000519115 CABP2Q9NPB3 220 aa10.68□□□□□ -0.7
SDCBP-206ENST00000519115 ALS2Q96Q42 1657 aa10.68□□□□□ -0.7
SDCBP-206ENST00000519115 EVC2Q86UK5 1308 aa10.67□□□□□ -0.7
SDCBP-206ENST00000519115 NGDNQ8NEJ9 315 aaKnown RBP10.67□□□□□ -0.7
SDCBP-206ENST00000519115 TNS3Q68CZ2 1445 aa10.67□□□□□ -0.7
SDCBP-206ENST00000519115 PPIP5K1Q6PFW1 1433 aa10.67□□□□□ -0.7
SDCBP-206ENST00000519115 USP47Q96K76 1375 aa10.66□□□□□ -0.7
SDCBP-206ENST00000519115 ZNF316A6NFI3 1004 aaPredicted RBP10.66□□□□□ -0.7
SDCBP-206ENST00000519115 PLEKHG5O94827 1062 aa10.66□□□□□ -0.7
SDCBP-206ENST00000519115 PSME1Q06323 249 aa10.66□□□□□ -0.7
SDCBP-206ENST00000519115 MEX3CQ5U5Q3 659 aaKnown RBP10.66□□□□□ -0.7
SDCBP-206ENST00000519115 AKAP12Q02952 1782 aa10.66□□□□□ -0.7
SDCBP-206ENST00000519115 SBNO2Q9Y2G9 1366 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms