RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 NPHP3Q7Z494 1330 aa28.63■■■□□ 2.17
CTNNA1-213ENST00000519113 ESCO1Q5FWF5 840 aa28.61■■■□□ 2.17
CTNNA1-213ENST00000519113 ATRNO75882 1429 aa28.6■■■□□ 2.17
CTNNA1-213ENST00000519113 SLC4A1APQ9BWU0 796 aaKnown RBP28.59■■■□□ 2.17
CTNNA1-213ENST00000519113 RRBP1Q9P2E9 1410 aaKnown RBP28.59■■■□□ 2.17
CTNNA1-213ENST00000519113 COL22A1Q8NFW1 1626 aaPredicted RBP28.55■■■□□ 2.16
CTNNA1-213ENST00000519113 MYOM2P54296 1465 aa28.55■■■□□ 2.16
CTNNA1-213ENST00000519113 LRPPRCP42704 1394 aaKnown RBP28.54■■■□□ 2.16
CTNNA1-213ENST00000519113 CCDC125Q86Z20 511 aa28.54■■■□□ 2.16
CTNNA1-213ENST00000519113 ZRANB1Q9UGI0 708 aa28.54■■■□□ 2.16
CTNNA1-213ENST00000519113 FOXO3O43524 673 aa28.53■■■□□ 2.16
CTNNA1-213ENST00000519113 EP400Q96L91 3159 aa28.53■■■□□ 2.16
CTNNA1-213ENST00000519113 CDC42BPGQ6DT37 1551 aa28.51■■■□□ 2.15
CTNNA1-213ENST00000519113 BCL9LQ86UU0 1499 aa28.5■■■□□ 2.15
CTNNA1-213ENST00000519113 PXDNQ92626 1479 aa28.5■■■□□ 2.15
CTNNA1-213ENST00000519113 XPCQ01831 940 aaPredicted RBP28.49■■■□□ 2.15
CTNNA1-213ENST00000519113 GJD4Q96KN9 370 aaPredicted RBP28.49■■■□□ 2.15
CTNNA1-213ENST00000519113 PPLO60437 1756 aa28.48■■■□□ 2.15
CTNNA1-213ENST00000519113 STK26Q9P289 416 aa28.48■■■□□ 2.15
CTNNA1-213ENST00000519113 ADGRF5Q8IZF2 1346 aa28.46■■■□□ 2.15
CTNNA1-213ENST00000519113 WAPLQ7Z5K2 1190 aa28.46■■■□□ 2.15
CTNNA1-213ENST00000519113 NUTM2FA1L443 756 aa28.44■■■□□ 2.14
CTNNA1-213ENST00000519113 TECPR2O15040 1411 aa28.43■■■□□ 2.14
CTNNA1-213ENST00000519113 RGL3Q3MIN7 710 aa28.43■■■□□ 2.14
CTNNA1-213ENST00000519113 UNC5CLQ8IV45 518 aa28.42■■■□□ 2.14
CTNNA1-213ENST00000519113 ABCC11Q96J66 1382 aa28.41■■■□□ 2.14
CTNNA1-213ENST00000519113 ANKRD30BQ9BXX2 1392 aa28.41■■■□□ 2.14
CTNNA1-213ENST00000519113 CCDC144AA2RUR9 1427 aa28.41■■■□□ 2.14
CTNNA1-213ENST00000519113 SPATA31A3Q5VYP0 1347 aa28.39■■■□□ 2.13
CTNNA1-213ENST00000519113 TMEM132EQ6IEE7 984 aa28.37■■■□□ 2.13
CTNNA1-213ENST00000519113 MARF1Q9Y4F3 1742 aaKnown RBP28.37■■■□□ 2.13
CTNNA1-213ENST00000519113 KRT28Q7Z3Y7 464 aa28.35■■■□□ 2.13
CTNNA1-213ENST00000519113 PLEKHH1Q9ULM0 1364 aa28.35■■■□□ 2.13
CTNNA1-213ENST00000519113 SPATA31E1Q6ZUB1 1445 aa28.35■■■□□ 2.13
CTNNA1-213ENST00000519113 SLIT2O94813 1529 aa28.34■■■□□ 2.13
CTNNA1-213ENST00000519113 RALGAPBQ86X10 1494 aa28.34■■■□□ 2.13
CTNNA1-213ENST00000519113 SIRT1Q96EB6 747 aa28.33■■■□□ 2.13
CTNNA1-213ENST00000519113 HAP1P54257 671 aaPredicted RBP28.32■■■□□ 2.12
CTNNA1-213ENST00000519113 BLMP54132 1417 aaPredicted RBP28.32■■■□□ 2.12
CTNNA1-213ENST00000519113 PSME1Q06323 249 aa28.31■■■□□ 2.12
CTNNA1-213ENST00000519113 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.31■■■□□ 2.12
CTNNA1-213ENST00000519113 PIK3C2GO75747 1445 aa28.3■■■□□ 2.12
CTNNA1-213ENST00000519113 YTHDC2Q9H6S0 1430 aaKnown RBP28.3■■■□□ 2.12
CTNNA1-213ENST00000519113 MPHOSPH9Q99550 1183 aa28.29■■■□□ 2.12
CTNNA1-213ENST00000519113 KIF1AQ12756 1690 aa28.29■■■□□ 2.12
CTNNA1-213ENST00000519113 SF3B2Q13435 895 aaKnown RBP28.28■■■□□ 2.12
CTNNA1-213ENST00000519113 PHF8Q9UPP1 1060 aa28.28■■■□□ 2.12
CTNNA1-213ENST00000519113 KNDC1Q76NI1 1749 aa28.27■■■□□ 2.12
CTNNA1-213ENST00000519113 GLI3P10071 1580 aa28.27■■■□□ 2.12
CTNNA1-213ENST00000519113 FMN2Q9NZ56 1722 aa28.26■■■□□ 2.12
CTNNA1-213ENST00000519113 VPS72Q15906 364 aa28.26■■■□□ 2.11
CTNNA1-213ENST00000519113 SEPT12Q8IYM1 358 aa28.26■■■□□ 2.11
CTNNA1-213ENST00000519113 TNS3Q68CZ2 1445 aa28.25■■■□□ 2.11
CTNNA1-213ENST00000519113 C14orf93Q9H972 538 aaKnown RBP28.24■■■□□ 2.11
CTNNA1-213ENST00000519113 USP32Q8NFA0 1604 aa28.24■■■□□ 2.11
CTNNA1-213ENST00000519113 ONECUT3O60422 494 aaPredicted RBP28.22■■■□□ 2.11
CTNNA1-213ENST00000519113 CABLES1Q8TDN4 633 aa28.22■■■□□ 2.11
CTNNA1-213ENST00000519113 IFT172Q9UG01 1749 aa28.22■■■□□ 2.11
CTNNA1-213ENST00000519113 CCDC9Q9Y3X0 531 aaKnown RBP28.22■■■□□ 2.11
CTNNA1-213ENST00000519113 SBNO1A3KN83 1393 aa28.22■■■□□ 2.11
CTNNA1-213ENST00000519113 DHX57Q6P158 1386 aaKnown RBP28.22■■■□□ 2.11
CTNNA1-213ENST00000519113 LMOD2Q6P5Q4 547 aa28.21■■■□□ 2.11
CTNNA1-213ENST00000519113 DEFB132Q7Z7B7 95 aa28.21■■■□□ 2.11
CTNNA1-213ENST00000519113 ARHGEF10O15013 1369 aa28.2■■■□□ 2.1
CTNNA1-213ENST00000519113 PLEKHG5O94827 1062 aa28.18■■■□□ 2.1
CTNNA1-213ENST00000519113 KRT27Q7Z3Y8 459 aa28.18■■■□□ 2.1
CTNNA1-213ENST00000519113 NRXN1Q9ULB1 1477 aa28.16■■■□□ 2.1
CTNNA1-213ENST00000519113 CFAP70Q5T0N1 1121 aa28.16■■■□□ 2.1
CTNNA1-213ENST00000519113 PRAM1Q96QH2 718 aa28.16■■■□□ 2.1
CTNNA1-213ENST00000519113 ACIN1Q9UKV3 1341 aaKnown RBP28.15■■■□□ 2.1
CTNNA1-213ENST00000519113 SAFB2Q14151 953 aaKnown RBP eCLIP28.14■■■□□ 2.1
CTNNA1-213ENST00000519113 FAM83GA6ND36 823 aa28.13■■■□□ 2.09
CTNNA1-213ENST00000519113 POGKQ9P215 609 aa28.13■■■□□ 2.09
CTNNA1-213ENST00000519113 BRWD3Q6RI45 1802 aa28.12■■■□□ 2.09
CTNNA1-213ENST00000519113 NWD2Q9ULI1 1742 aa28.12■■■□□ 2.09
CTNNA1-213ENST00000519113 A0A0G2JS52 829 aa28.11■■■□□ 2.09
CTNNA1-213ENST00000519113 MYT1Q01538 1121 aa28.11■■■□□ 2.09
CTNNA1-213ENST00000519113 PMFBP1Q8TBY8 1022 aa28.11■■■□□ 2.09
CTNNA1-213ENST00000519113 ANKARQ7Z5J8 1434 aa28.09■■■□□ 2.09
CTNNA1-213ENST00000519113 BAG6P46379 1132 aa28.09■■■□□ 2.09
CTNNA1-213ENST00000519113 RGPD8O14715 1765 aaPredicted RBP28.08■■■□□ 2.09
CTNNA1-213ENST00000519113 PLCH1Q4KWH8 1693 aa28.07■■■□□ 2.08
CTNNA1-213ENST00000519113 BTG4Q9NY30 223 aa28.06■■■□□ 2.08
CTNNA1-213ENST00000519113 FAM98CQ17RN3 349 aaKnown RBP28.05■■■□□ 2.08
CTNNA1-213ENST00000519113 DLC1Q96QB1 1528 aa28.04■■■□□ 2.08
CTNNA1-213ENST00000519113 GPRASP1Q5JY77 1395 aa28.04■■■□□ 2.08
CTNNA1-213ENST00000519113 ABCA3Q99758 1704 aa28.01■■■□□ 2.07
CTNNA1-213ENST00000519113 EIF3AQ14152 1382 aaKnown RBP28.01■■■□□ 2.07
CTNNA1-213ENST00000519113 HIRIP3Q9BW71 556 aaPredicted RBP27.99■■■□□ 2.07
CTNNA1-213ENST00000519113 TRAK1Q9UPV9 953 aa27.99■■■□□ 2.07
CTNNA1-213ENST00000519113 PSDA5PKW4 1024 aaPredicted RBP27.98■■■□□ 2.07
CTNNA1-213ENST00000519113 ADGRB2O60241 1585 aa27.98■■■□□ 2.07
CTNNA1-213ENST00000519113 LRP5O75197 1615 aa27.97■■■□□ 2.07
CTNNA1-213ENST00000519113 HRCP23327 699 aa27.96■■■□□ 2.07
CTNNA1-213ENST00000519113 SPATA31A5Q5VU36 1347 aa27.95■■■□□ 2.07
CTNNA1-213ENST00000519113 SPATA31A7Q8IWB4 1347 aa27.95■■■□□ 2.07
CTNNA1-213ENST00000519113 MINK1Q8N4C8 1332 aaPredicted RBP27.95■■■□□ 2.07
CTNNA1-213ENST00000519113 NGDNQ8NEJ9 315 aaKnown RBP27.95■■■□□ 2.06
CTNNA1-213ENST00000519113 WASLO00401 505 aaPredicted RBP27.94■■■□□ 2.06
CTNNA1-213ENST00000519113 EN1Q05925 392 aaPredicted RBP27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms