RNA–Protein interactions for RNA: ENST00000519112.5

BRD9-217, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 861 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-217ENST00000519112 C14orf93Q9H972 538 aaKnown RBP20.56■□□□□ 0.88
BRD9-217ENST00000519112 PLEKHH1Q9ULM0 1364 aa20.56■□□□□ 0.88
BRD9-217ENST00000519112 CDC42BPGQ6DT37 1551 aa20.55■□□□□ 0.88
BRD9-217ENST00000519112 YTHDC2Q9H6S0 1430 aaKnown RBP20.55■□□□□ 0.88
BRD9-217ENST00000519112 CFAP70Q5T0N1 1121 aa20.54■□□□□ 0.88
BRD9-217ENST00000519112 LRRC59Q96AG4 307 aaKnown RBP20.53■□□□□ 0.88
BRD9-217ENST00000519112 PNPLA6Q8IY17 1366 aa20.5■□□□□ 0.87
BRD9-217ENST00000519112 NUTM2BA6NNL0 878 aaPredicted RBP20.5■□□□□ 0.87
BRD9-217ENST00000519112 NUTM2EB1AL46 878 aaPredicted RBP20.5■□□□□ 0.87
BRD9-217ENST00000519112 NUTM2AQ8IVF1 878 aaPredicted RBP20.5■□□□□ 0.87
BRD9-217ENST00000519112 SOS2Q07890 1332 aaPredicted RBP20.5■□□□□ 0.87
BRD9-217ENST00000519112 MEX3CQ5U5Q3 659 aaKnown RBP20.49■□□□□ 0.87
BRD9-217ENST00000519112 FMN2Q9NZ56 1722 aa20.48■□□□□ 0.87
BRD9-217ENST00000519112 NUTM2FA1L443 756 aa20.47■□□□□ 0.87
BRD9-217ENST00000519112 SIRT1Q96EB6 747 aa20.47■□□□□ 0.87
BRD9-217ENST00000519112 ADGRB1O14514 1584 aa20.46■□□□□ 0.87
BRD9-217ENST00000519112 RGPD8O14715 1765 aaPredicted RBP20.46■□□□□ 0.87
BRD9-217ENST00000519112 ESCO1Q5FWF5 840 aa20.46■□□□□ 0.87
BRD9-217ENST00000519112 DHX57Q6P158 1386 aaKnown RBP20.46■□□□□ 0.87
BRD9-217ENST00000519112 KDM2AQ9Y2K7 1162 aa20.45■□□□□ 0.86
BRD9-217ENST00000519112 DCAF11Q8TEB1 546 aa20.44■□□□□ 0.86
BRD9-217ENST00000519112 PXDNQ92626 1479 aa20.43■□□□□ 0.86
BRD9-217ENST00000519112 ZNF772Q68DY9 489 aaPredicted RBP20.42■□□□□ 0.86
BRD9-217ENST00000519112 DLC1Q96QB1 1528 aa20.42■□□□□ 0.86
BRD9-217ENST00000519112 FOXO3O43524 673 aa20.41■□□□□ 0.86
BRD9-217ENST00000519112 PRAM1Q96QH2 718 aa20.41■□□□□ 0.86
BRD9-217ENST00000519112 COL22A1Q8NFW1 1626 aaPredicted RBP20.41■□□□□ 0.86
BRD9-217ENST00000519112 XPCQ01831 940 aaPredicted RBP20.4■□□□□ 0.86
BRD9-217ENST00000519112 SAFB2Q14151 953 aaKnown RBP eCLIP20.4■□□□□ 0.86
BRD9-217ENST00000519112 NPHP3Q7Z494 1330 aa20.4■□□□□ 0.86
BRD9-217ENST00000519112 AFF2P51816 1311 aa20.39■□□□□ 0.85
BRD9-217ENST00000519112 C8orf37Q96NL8 207 aa20.38■□□□□ 0.85
BRD9-217ENST00000519112 TRAK1Q9UPV9 953 aa20.37■□□□□ 0.85
BRD9-217ENST00000519112 KIF1AQ12756 1690 aa20.37■□□□□ 0.85
BRD9-217ENST00000519112 USP32Q8NFA0 1604 aa20.37■□□□□ 0.85
BRD9-217ENST00000519112 ADAMTS2O95450 1211 aa20.36■□□□□ 0.85
BRD9-217ENST00000519112 STAC3Q96MF2 364 aa20.35■□□□□ 0.85
BRD9-217ENST00000519112 ADGRB2O60241 1585 aa20.34■□□□□ 0.85
BRD9-217ENST00000519112 POGKQ9P215 609 aa20.34■□□□□ 0.85
BRD9-217ENST00000519112 ARHGEF28Q8N1W1 1705 aaKnown RBP20.33■□□□□ 0.84
BRD9-217ENST00000519112 MARF1Q9Y4F3 1742 aaKnown RBP20.33■□□□□ 0.84
BRD9-217ENST00000519112 RXRBP28702 533 aa20.32■□□□□ 0.84
BRD9-217ENST00000519112 NGLY1Q96IV0 654 aa20.31■□□□□ 0.84
BRD9-217ENST00000519112 HIRIP3Q9BW71 556 aaPredicted RBP20.31■□□□□ 0.84
BRD9-217ENST00000519112 PHF8Q9UPP1 1060 aa20.31■□□□□ 0.84
BRD9-217ENST00000519112 KRT28Q7Z3Y7 464 aa20.3■□□□□ 0.84
BRD9-217ENST00000519112 SPATA31A3Q5VYP0 1347 aa20.29■□□□□ 0.84
BRD9-217ENST00000519112 QTRT2Q9H974 415 aaKnown RBP20.29■□□□□ 0.84
BRD9-217ENST00000519112 KIAA1210Q9ULL0 1709 aa20.29■□□□□ 0.84
BRD9-217ENST00000519112 MINK1Q8N4C8 1332 aaPredicted RBP20.28■□□□□ 0.84
BRD9-217ENST00000519112 PRR36Q9H6K5 1346 aa20.27■□□□□ 0.84
BRD9-217ENST00000519112 ANKARQ7Z5J8 1434 aa20.27■□□□□ 0.84
BRD9-217ENST00000519112 CDK12Q9NYV4 1490 aaPredicted RBP20.27■□□□□ 0.84
BRD9-217ENST00000519112 FNBP4Q8N3X1 1017 aaPredicted RBP20.27■□□□□ 0.84
BRD9-217ENST00000519112 PMFBP1Q8TBY8 1022 aa20.26■□□□□ 0.83
BRD9-217ENST00000519112 RBM6P78332 1123 aaKnown RBP20.25■□□□□ 0.83
BRD9-217ENST00000519112 USP21Q9UK80 565 aa20.25■□□□□ 0.83
BRD9-217ENST00000519112 TULP4Q9NRJ4 1543 aa20.24■□□□□ 0.83
BRD9-217ENST00000519112 WASLO00401 505 aaPredicted RBP20.24■□□□□ 0.83
BRD9-217ENST00000519112 NBPF1Q3BBV0 1214 aa20.24■□□□□ 0.83
BRD9-217ENST00000519112 RGS12O14924 1447 aa20.24■□□□□ 0.83
BRD9-217ENST00000519112 TNS3Q68CZ2 1445 aa20.23■□□□□ 0.83
BRD9-217ENST00000519112 TRPM3Q9HCF6 1732 aaPredicted RBP20.23■□□□□ 0.83
BRD9-217ENST00000519112 BCL9LQ86UU0 1499 aa20.23■□□□□ 0.83
BRD9-217ENST00000519112 SIN3AQ96ST3 1273 aa20.22■□□□□ 0.83
BRD9-217ENST00000519112 ABCA3Q99758 1704 aa20.22■□□□□ 0.83
BRD9-217ENST00000519112 SBNO1A3KN83 1393 aa20.21■□□□□ 0.83
BRD9-217ENST00000519112 PSME1Q06323 249 aa20.21■□□□□ 0.83
BRD9-217ENST00000519112 ATRNO75882 1429 aa20.2■□□□□ 0.82
BRD9-217ENST00000519112 CABLES1Q8TDN4 633 aa20.2■□□□□ 0.82
BRD9-217ENST00000519112 UPF1Q92900 1129 aaKnown RBP eCLIP20.2■□□□□ 0.82
BRD9-217ENST00000519112 TRPC5Q9UL62 973 aaPredicted RBP20.2■□□□□ 0.82
BRD9-217ENST00000519112 L3MBTL2Q969R5 705 aa20.19■□□□□ 0.82
BRD9-217ENST00000519112 ALS2Q96Q42 1657 aa20.19■□□□□ 0.82
BRD9-217ENST00000519112 ATP7BP35670 1465 aa20.18■□□□□ 0.82
BRD9-217ENST00000519112 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.18■□□□□ 0.82
BRD9-217ENST00000519112 EIF3AQ14152 1382 aaKnown RBP20.18■□□□□ 0.82
BRD9-217ENST00000519112 ITSN1Q15811 1721 aa20.17■□□□□ 0.82
BRD9-217ENST00000519112 SLIT2O94813 1529 aa20.17■□□□□ 0.82
BRD9-217ENST00000519112 PLEKHG5O94827 1062 aa20.16■□□□□ 0.82
BRD9-217ENST00000519112 LMOD2Q6P5Q4 547 aa20.15■□□□□ 0.82
BRD9-217ENST00000519112 NUDT16Q96DE0 195 aaKnown RBP20.15■□□□□ 0.82
BRD9-217ENST00000519112 CDK19Q9BWU1 502 aa20.15■□□□□ 0.82
BRD9-217ENST00000519112 TOPAZ1Q8N9V7 1692 aa20.14■□□□□ 0.81
BRD9-217ENST00000519112 ARHGEF10O15013 1369 aa20.14■□□□□ 0.81
BRD9-217ENST00000519112 PLCH1Q4KWH8 1693 aa20.13■□□□□ 0.81
BRD9-217ENST00000519112 EP400Q96L91 3159 aa20.13■□□□□ 0.81
BRD9-217ENST00000519112 CRYBG1Q9Y4K1 1723 aa20.13■□□□□ 0.81
BRD9-217ENST00000519112 TRPM1Q7Z4N2 1603 aa20.13■□□□□ 0.81
BRD9-217ENST00000519112 NEUROD1Q13562 356 aa20.12■□□□□ 0.81
BRD9-217ENST00000519112 GLI3P10071 1580 aa20.12■□□□□ 0.81
BRD9-217ENST00000519112 GPRASP1Q5JY77 1395 aa20.11■□□□□ 0.81
BRD9-217ENST00000519112 UNC5CLQ8IV45 518 aa20.11■□□□□ 0.81
BRD9-217ENST00000519112 NGDNQ8NEJ9 315 aaKnown RBP20.11■□□□□ 0.81
BRD9-217ENST00000519112 GJD4Q96KN9 370 aaPredicted RBP20.11■□□□□ 0.81
BRD9-217ENST00000519112 NWD2Q9ULI1 1742 aa20.1■□□□□ 0.81
BRD9-217ENST00000519112 HAP1P54257 671 aaPredicted RBP20.1■□□□□ 0.81
BRD9-217ENST00000519112 QRICH2Q9H0J4 1663 aa20.1■□□□□ 0.81
BRD9-217ENST00000519112 RALGAPBQ86X10 1494 aa20.08■□□□□ 0.81
BRD9-217ENST00000519112 FAM83GA6ND36 823 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms