RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 RBM6P78332 1123 aaKnown RBP20.51■□□□□ 0.87
VDAC3-204ENST00000519072 QTRT2Q9H974 415 aaKnown RBP20.51■□□□□ 0.87
VDAC3-204ENST00000519072 COL22A1Q8NFW1 1626 aaPredicted RBP20.51■□□□□ 0.87
VDAC3-204ENST00000519072 CCDC144AA2RUR9 1427 aa20.5■□□□□ 0.87
VDAC3-204ENST00000519072 RGS12O14924 1447 aa20.5■□□□□ 0.87
VDAC3-204ENST00000519072 SPATA31E1Q6ZUB1 1445 aa20.49■□□□□ 0.87
VDAC3-204ENST00000519072 ADAMTS2O95450 1211 aa20.48■□□□□ 0.87
VDAC3-204ENST00000519072 NGLY1Q96IV0 654 aa20.48■□□□□ 0.87
VDAC3-204ENST00000519072 ADGRF5Q8IZF2 1346 aa20.48■□□□□ 0.87
VDAC3-204ENST00000519072 KNDC1Q76NI1 1749 aa20.47■□□□□ 0.87
VDAC3-204ENST00000519072 TECPR2O15040 1411 aa20.47■□□□□ 0.87
VDAC3-204ENST00000519072 ANKRD30BQ9BXX2 1392 aa20.46■□□□□ 0.87
VDAC3-204ENST00000519072 NPHP3Q7Z494 1330 aa20.45■□□□□ 0.86
VDAC3-204ENST00000519072 LRPPRCP42704 1394 aaKnown RBP20.45■□□□□ 0.86
VDAC3-204ENST00000519072 PXDNQ92626 1479 aa20.44■□□□□ 0.86
VDAC3-204ENST00000519072 RGL3Q3MIN7 710 aa20.44■□□□□ 0.86
VDAC3-204ENST00000519072 MPHOSPH9Q99550 1183 aa20.44■□□□□ 0.86
VDAC3-204ENST00000519072 MARF1Q9Y4F3 1742 aaKnown RBP20.44■□□□□ 0.86
VDAC3-204ENST00000519072 ESCO1Q5FWF5 840 aa20.43■□□□□ 0.86
VDAC3-204ENST00000519072 MYOM2P54296 1465 aa20.43■□□□□ 0.86
VDAC3-204ENST00000519072 FNBP4Q8N3X1 1017 aaPredicted RBP20.42■□□□□ 0.86
VDAC3-204ENST00000519072 USP21Q9UK80 565 aa20.42■□□□□ 0.86
VDAC3-204ENST00000519072 ABCC11Q96J66 1382 aa20.42■□□□□ 0.86
VDAC3-204ENST00000519072 PIK3C2GO75747 1445 aa20.42■□□□□ 0.86
VDAC3-204ENST00000519072 STK26Q9P289 416 aa20.41■□□□□ 0.86
VDAC3-204ENST00000519072 TRPC5Q9UL62 973 aaPredicted RBP20.41■□□□□ 0.86
VDAC3-204ENST00000519072 FMN2Q9NZ56 1722 aa20.41■□□□□ 0.86
VDAC3-204ENST00000519072 WAPLQ7Z5K2 1190 aa20.4■□□□□ 0.86
VDAC3-204ENST00000519072 ATRNO75882 1429 aa20.38■□□□□ 0.85
VDAC3-204ENST00000519072 PLEKHH1Q9ULM0 1364 aa20.38■□□□□ 0.85
VDAC3-204ENST00000519072 FOXO3O43524 673 aa20.38■□□□□ 0.85
VDAC3-204ENST00000519072 TMEM132EQ6IEE7 984 aa20.38■□□□□ 0.85
VDAC3-204ENST00000519072 YTHDC2Q9H6S0 1430 aaKnown RBP20.37■□□□□ 0.85
VDAC3-204ENST00000519072 KIF1AQ12756 1690 aa20.37■□□□□ 0.85
VDAC3-204ENST00000519072 ACIN1Q9UKV3 1341 aaKnown RBP20.36■□□□□ 0.85
VDAC3-204ENST00000519072 ATAD2Q6PL18 1390 aa20.35■□□□□ 0.85
VDAC3-204ENST00000519072 XPCQ01831 940 aaPredicted RBP20.35■□□□□ 0.85
VDAC3-204ENST00000519072 NUTM2FA1L443 756 aa20.34■□□□□ 0.85
VDAC3-204ENST00000519072 SIRT1Q96EB6 747 aa20.34■□□□□ 0.85
VDAC3-204ENST00000519072 EP400Q96L91 3159 aa20.34■□□□□ 0.85
VDAC3-204ENST00000519072 BCL9LQ86UU0 1499 aa20.34■□□□□ 0.85
VDAC3-204ENST00000519072 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.33■□□□□ 0.85
VDAC3-204ENST00000519072 NRXN1Q9ULB1 1477 aa20.33■□□□□ 0.85
VDAC3-204ENST00000519072 RGPD8O14715 1765 aaPredicted RBP20.33■□□□□ 0.84
VDAC3-204ENST00000519072 C14orf93Q9H972 538 aaKnown RBP20.32■□□□□ 0.84
VDAC3-204ENST00000519072 SPATA31A3Q5VYP0 1347 aa20.3■□□□□ 0.84
VDAC3-204ENST00000519072 PPP4R3CPQ6ZMV5 832 aa20.3■□□□□ 0.84
VDAC3-204ENST00000519072 DHX57Q6P158 1386 aaKnown RBP20.28■□□□□ 0.84
VDAC3-204ENST00000519072 USP32Q8NFA0 1604 aa20.27■□□□□ 0.84
VDAC3-204ENST00000519072 SLIT2O94813 1529 aa20.27■□□□□ 0.83
VDAC3-204ENST00000519072 SRCAPQ6ZRS2 3230 aa20.27■□□□□ 0.83
VDAC3-204ENST00000519072 CFAP70Q5T0N1 1121 aa20.26■□□□□ 0.83
VDAC3-204ENST00000519072 KRT28Q7Z3Y7 464 aa20.26■□□□□ 0.83
VDAC3-204ENST00000519072 GJD4Q96KN9 370 aaPredicted RBP20.26■□□□□ 0.83
VDAC3-204ENST00000519072 PHF8Q9UPP1 1060 aa20.25■□□□□ 0.83
VDAC3-204ENST00000519072 DLC1Q96QB1 1528 aa20.25■□□□□ 0.83
VDAC3-204ENST00000519072 TNS3Q68CZ2 1445 aa20.24■□□□□ 0.83
VDAC3-204ENST00000519072 GLI3P10071 1580 aa20.24■□□□□ 0.83
VDAC3-204ENST00000519072 UNC5CLQ8IV45 518 aa20.23■□□□□ 0.83
VDAC3-204ENST00000519072 ABCA3Q99758 1704 aa20.22■□□□□ 0.83
VDAC3-204ENST00000519072 PSME1Q06323 249 aa20.22■□□□□ 0.83
VDAC3-204ENST00000519072 PRAM1Q96QH2 718 aa20.22■□□□□ 0.83
VDAC3-204ENST00000519072 RALGAPBQ86X10 1494 aa20.22■□□□□ 0.83
VDAC3-204ENST00000519072 ADGRB2O60241 1585 aa20.21■□□□□ 0.83
VDAC3-204ENST00000519072 CCDC125Q86Z20 511 aa20.21■□□□□ 0.83
VDAC3-204ENST00000519072 SBNO1A3KN83 1393 aa20.21■□□□□ 0.83
VDAC3-204ENST00000519072 RAB3GAP2Q9H2M9 1393 aa20.21■□□□□ 0.83
VDAC3-204ENST00000519072 NWD2Q9ULI1 1742 aa20.2■□□□□ 0.82
VDAC3-204ENST00000519072 ADGRB1O14514 1584 aa20.2■□□□□ 0.82
VDAC3-204ENST00000519072 PLCH1Q4KWH8 1693 aa20.19■□□□□ 0.82
VDAC3-204ENST00000519072 ANKARQ7Z5J8 1434 aa20.19■□□□□ 0.82
VDAC3-204ENST00000519072 BRWD3Q6RI45 1802 aa20.19■□□□□ 0.82
VDAC3-204ENST00000519072 SAFB2Q14151 953 aaKnown RBP eCLIP20.19■□□□□ 0.82
VDAC3-204ENST00000519072 POGKQ9P215 609 aa20.18■□□□□ 0.82
VDAC3-204ENST00000519072 ARHGEF10O15013 1369 aa20.18■□□□□ 0.82
VDAC3-204ENST00000519072 HAP1P54257 671 aaPredicted RBP20.17■□□□□ 0.82
VDAC3-204ENST00000519072 CABLES1Q8TDN4 633 aa20.16■□□□□ 0.82
VDAC3-204ENST00000519072 TRPM3Q9HCF6 1732 aaPredicted RBP20.16■□□□□ 0.82
VDAC3-204ENST00000519072 VPS72Q15906 364 aa20.14■□□□□ 0.81
VDAC3-204ENST00000519072 ZRANB1Q9UGI0 708 aa20.14■□□□□ 0.81
VDAC3-204ENST00000519072 LMOD2Q6P5Q4 547 aa20.13■□□□□ 0.81
VDAC3-204ENST00000519072 PMFBP1Q8TBY8 1022 aa20.13■□□□□ 0.81
VDAC3-204ENST00000519072 ALS2Q96Q42 1657 aa20.13■□□□□ 0.81
VDAC3-204ENST00000519072 BLMP54132 1417 aaPredicted RBP20.12■□□□□ 0.81
VDAC3-204ENST00000519072 EIF3AQ14152 1382 aaKnown RBP20.12■□□□□ 0.81
VDAC3-204ENST00000519072 TRAK1Q9UPV9 953 aa20.11■□□□□ 0.81
VDAC3-204ENST00000519072 TULP4Q9NRJ4 1543 aa20.11■□□□□ 0.81
VDAC3-204ENST00000519072 NRAPQ86VF7 1730 aa20.1■□□□□ 0.81
VDAC3-204ENST00000519072 ONECUT3O60422 494 aaPredicted RBP20.1■□□□□ 0.81
VDAC3-204ENST00000519072 PLEKHG5O94827 1062 aa20.1■□□□□ 0.81
VDAC3-204ENST00000519072 SEPT12Q8IYM1 358 aa20.1■□□□□ 0.81
VDAC3-204ENST00000519072 STAC3Q96MF2 364 aa20.09■□□□□ 0.81
VDAC3-204ENST00000519072 HIRIP3Q9BW71 556 aaPredicted RBP20.09■□□□□ 0.81
VDAC3-204ENST00000519072 MINK1Q8N4C8 1332 aaPredicted RBP20.08■□□□□ 0.81
VDAC3-204ENST00000519072 PRR36Q9H6K5 1346 aa20.08■□□□□ 0.81
VDAC3-204ENST00000519072 DCAF11Q8TEB1 546 aa20.08■□□□□ 0.81
VDAC3-204ENST00000519072 KDM2AQ9Y2K7 1162 aa20.08■□□□□ 0.81
VDAC3-204ENST00000519072 GPRASP1Q5JY77 1395 aa20.08■□□□□ 0.8
VDAC3-204ENST00000519072 FAM83GA6ND36 823 aa20.07■□□□□ 0.8
VDAC3-204ENST00000519072 CCDC9Q9Y3X0 531 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms