RNA–Protein interactions for RNA: ENST00000518977.5

TNIP1-205, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,200 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-205ENST00000518977 PRAM1Q96QH2 718 aa27.55■■■□□ 2
TNIP1-205ENST00000518977 TNNT2P45379 298 aaPredicted RBP27.54■■■□□ 2
TNIP1-205ENST00000518977 MORC1Q86VD1 984 aa27.54■■■□□ 2
TNIP1-205ENST00000518977 ZMYM3Q14202 1370 aa27.54■■■□□ 2
TNIP1-205ENST00000518977 PLEKHH1Q9ULM0 1364 aa27.53■■■□□ 2
TNIP1-205ENST00000518977 CCDC146Q8IYE0 955 aa27.53■■■□□ 2
TNIP1-205ENST00000518977 ESF1Q9H501 851 aaKnown RBP27.53■■■□□ 2
TNIP1-205ENST00000518977 MINK1Q8N4C8 1332 aaPredicted RBP27.52■■■□□ 2
TNIP1-205ENST00000518977 POGKQ9P215 609 aa27.52■■■□□ 2
TNIP1-205ENST00000518977 SRPK2P78362 688 aaKnown RBP27.51■■□□□ 1.99
TNIP1-205ENST00000518977 RRP1P56182 461 aaKnown RBP27.51■■□□□ 1.99
TNIP1-205ENST00000518977 RIMS2Q9UQ26 1411 aa27.5■■□□□ 1.99
TNIP1-205ENST00000518977 ANKRD36BQ8N2N9 1353 aa27.5■■□□□ 1.99
TNIP1-205ENST00000518977 CGNL1Q0VF96 1302 aa27.49■■□□□ 1.99
TNIP1-205ENST00000518977 USP32Q8NFA0 1604 aa27.46■■□□□ 1.99
TNIP1-205ENST00000518977 POLR3AO14802 1390 aaPredicted RBP27.46■■□□□ 1.99
TNIP1-205ENST00000518977 ZNF521Q96K83 1311 aa27.45■■□□□ 1.99
TNIP1-205ENST00000518977 APAF1O14727 1248 aa27.44■■□□□ 1.98
TNIP1-205ENST00000518977 A0A1W2PP64 1363 aa27.42■■□□□ 1.98
TNIP1-205ENST00000518977 WAPLQ7Z5K2 1190 aa27.41■■□□□ 1.98
TNIP1-205ENST00000518977 RBM19Q9Y4C8 960 aaKnown RBP27.41■■□□□ 1.98
TNIP1-205ENST00000518977 MTHFSP49914 203 aa27.4■■□□□ 1.98
TNIP1-205ENST00000518977 CCDC136Q96JN2 1154 aa27.4■■□□□ 1.98
TNIP1-205ENST00000518977 CDK19Q9BWU1 502 aa27.4■■□□□ 1.98
TNIP1-205ENST00000518977 GOLGA2Q08379 1002 aa27.39■■□□□ 1.98
TNIP1-205ENST00000518977 DUSP27Q5VZP5 1158 aa27.39■■□□□ 1.98
TNIP1-205ENST00000518977 SETD1AO15047 1707 aaKnown RBP27.39■■□□□ 1.98
TNIP1-205ENST00000518977 ATAD2Q6PL18 1390 aa27.38■■□□□ 1.97
TNIP1-205ENST00000518977 NINLQ9Y2I6 1382 aa27.38■■□□□ 1.97
TNIP1-205ENST00000518977 EXOC6Q8TAG9 804 aa27.37■■□□□ 1.97
TNIP1-205ENST00000518977 PLIN1O60240 522 aa27.37■■□□□ 1.97
TNIP1-205ENST00000518977 SHPRHQ149N8 1683 aa27.37■■□□□ 1.97
TNIP1-205ENST00000518977 TNRQ92752 1358 aa27.35■■□□□ 1.97
TNIP1-205ENST00000518977 NSD2O96028 1365 aa27.35■■□□□ 1.97
TNIP1-205ENST00000518977 NRXN3Q9Y4C0 1643 aa27.35■■□□□ 1.97
TNIP1-205ENST00000518977 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.35■■□□□ 1.97
TNIP1-205ENST00000518977 ABCC11Q96J66 1382 aa27.34■■□□□ 1.97
TNIP1-205ENST00000518977 CD163L1Q9NR16 1453 aa27.34■■□□□ 1.97
TNIP1-205ENST00000518977 SLFN5Q08AF3 891 aa27.33■■□□□ 1.97
TNIP1-205ENST00000518977 SPINK5Q9NQ38 1064 aaPredicted RBP27.33■■□□□ 1.97
TNIP1-205ENST00000518977 GGNBP2Q9H3C7 697 aa27.33■■□□□ 1.97
TNIP1-205ENST00000518977 TERF2IPQ9NYB0 399 aa27.33■■□□□ 1.97
TNIP1-205ENST00000518977 METP08581 1390 aa27.33■■□□□ 1.97
TNIP1-205ENST00000518977 CABP1Q9NZU7 370 aa27.32■■□□□ 1.96
TNIP1-205ENST00000518977 DLC1Q96QB1 1528 aa27.32■■□□□ 1.96
TNIP1-205ENST00000518977 FYB1O15117 783 aa27.29■■□□□ 1.96
TNIP1-205ENST00000518977 TRMT2AQ8IZ69 625 aaKnown RBP27.29■■□□□ 1.96
TNIP1-205ENST00000518977 DMRT2Q9Y5R5 561 aa27.29■■□□□ 1.96
TNIP1-205ENST00000518977 CFAP53Q96M91 514 aa27.28■■□□□ 1.96
TNIP1-205ENST00000518977 CEBPAP49715 358 aaPredicted RBP27.28■■□□□ 1.96
TNIP1-205ENST00000518977 TXNDC2Q86VQ3 553 aa27.27■■□□□ 1.96
TNIP1-205ENST00000518977 HDGFP51858 240 aaKnown RBP27.26■■□□□ 1.96
TNIP1-205ENST00000518977 HDGFL2Q7Z4V5 671 aaPredicted RBP27.26■■□□□ 1.95
TNIP1-205ENST00000518977 UBR1Q8IWV7 1749 aa27.25■■□□□ 1.95
TNIP1-205ENST00000518977 TMEM2Q9UHN6 1383 aa27.25■■□□□ 1.95
TNIP1-205ENST00000518977 RUNDC1Q96C34 613 aa27.24■■□□□ 1.95
TNIP1-205ENST00000518977 NEUROD2Q15784 382 aa27.23■■□□□ 1.95
TNIP1-205ENST00000518977 MYT1Q01538 1121 aa27.22■■□□□ 1.95
TNIP1-205ENST00000518977 WWC1Q8IX03 1113 aa27.22■■□□□ 1.95
TNIP1-205ENST00000518977 NGEFQ8N5V2 710 aa27.22■■□□□ 1.95
TNIP1-205ENST00000518977 RRP7AQ9Y3A4 280 aaKnown RBP27.22■■□□□ 1.95
TNIP1-205ENST00000518977 NLRP1Q9C000 1473 aa27.22■■□□□ 1.95
TNIP1-205ENST00000518977 C20orf194Q5TEA3 1177 aa27.21■■□□□ 1.95
TNIP1-205ENST00000518977 TCP11L2Q8N4U5 519 aa27.21■■□□□ 1.95
TNIP1-205ENST00000518977 CRBNQ96SW2 442 aa27.21■■□□□ 1.95
TNIP1-205ENST00000518977 E9PSI1 815 aa27.2■■□□□ 1.95
TNIP1-205ENST00000518977 WASLO00401 505 aaPredicted RBP27.19■■□□□ 1.94
TNIP1-205ENST00000518977 PLPPR3Q6T4P5 718 aa27.19■■□□□ 1.94
TNIP1-205ENST00000518977 U2AF1L5P0DN76 240 aaPredicted RBP27.18■■□□□ 1.94
TNIP1-205ENST00000518977 U2AF1Q01081 240 aaKnown RBP eCLIP27.18■■□□□ 1.94
TNIP1-205ENST00000518977 ANKRD26Q9UPS8 1709 aa27.17■■□□□ 1.94
TNIP1-205ENST00000518977 LTKP29376 864 aa27.17■■□□□ 1.94
TNIP1-205ENST00000518977 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.17■■□□□ 1.94
TNIP1-205ENST00000518977 MED14O60244 1454 aa27.17■■□□□ 1.94
TNIP1-205ENST00000518977 NKTRP30414 1462 aaKnown RBP27.17■■□□□ 1.94
TNIP1-205ENST00000518977 IQSEC2Q5JU85 1478 aa27.16■■□□□ 1.94
TNIP1-205ENST00000518977 TRHP20396 242 aaPredicted RBP27.15■■□□□ 1.94
TNIP1-205ENST00000518977 ADAMTS13Q76LX8 1427 aa27.13■■□□□ 1.93
TNIP1-205ENST00000518977 NCKAP5LQ9HCH0 1330 aa27.13■■□□□ 1.93
TNIP1-205ENST00000518977 TECPR2O15040 1411 aa27.13■■□□□ 1.93
TNIP1-205ENST00000518977 FAM135BQ49AJ0 1406 aa27.13■■□□□ 1.93
TNIP1-205ENST00000518977 SIRT1Q96EB6 747 aa27.13■■□□□ 1.93
TNIP1-205ENST00000518977 ATP7BP35670 1465 aa27.12■■□□□ 1.93
TNIP1-205ENST00000518977 KNDC1Q76NI1 1749 aa27.12■■□□□ 1.93
TNIP1-205ENST00000518977 KIF20BQ96Q89 1820 aa27.12■■□□□ 1.93
TNIP1-205ENST00000518977 PHF23Q9BUL5 403 aaPredicted RBP27.12■■□□□ 1.93
TNIP1-205ENST00000518977 PPIP5K1Q6PFW1 1433 aa27.11■■□□□ 1.93
TNIP1-205ENST00000518977 U2SURPO15042 1029 aaKnown RBP27.11■■□□□ 1.93
TNIP1-205ENST00000518977 FBLN1P23142 703 aa27.11■■□□□ 1.93
TNIP1-205ENST00000518977 COL3A1P02461 1466 aaPredicted RBP27.1■■□□□ 1.93
TNIP1-205ENST00000518977 NUDT16Q96DE0 195 aaKnown RBP27.1■■□□□ 1.93
TNIP1-205ENST00000518977 C3P01024 1663 aa27.1■■□□□ 1.93
TNIP1-205ENST00000518977 BCAR3O75815 825 aa27.1■■□□□ 1.93
TNIP1-205ENST00000518977 ROBO2Q9HCK4 1378 aa27.09■■□□□ 1.93
TNIP1-205ENST00000518977 CPS1P31327 1500 aa27.09■■□□□ 1.93
TNIP1-205ENST00000518977 CPSF1Q10570 1443 aaKnown RBP27.08■■□□□ 1.93
TNIP1-205ENST00000518977 PLEKHG1Q9ULL1 1385 aa27.07■■□□□ 1.92
TNIP1-205ENST00000518977 SLC26A8Q96RN1 970 aa27.07■■□□□ 1.92
TNIP1-205ENST00000518977 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.06■■□□□ 1.92
TNIP1-205ENST00000518977 CCDC27Q2M243 656 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms