RNA–Protein interactions for RNA: ENST00000518815.1

MTCL1-207, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best) BASIC

Gene MTCL1, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-207ENST00000518815 CENPJQ9HC77 1338 aaPredicted RBP13.1□□□□□ -0.31
MTCL1-207ENST00000518815 KDM5AP29375 1690 aaKnown RBP13.09□□□□□ -0.31
MTCL1-207ENST00000518815 U2SURPO15042 1029 aaKnown RBP13.09□□□□□ -0.31
MTCL1-207ENST00000518815 CFAP70Q5T0N1 1121 aa13.09□□□□□ -0.31
MTCL1-207ENST00000518815 ZMYM3Q14202 1370 aa13.09□□□□□ -0.31
MTCL1-207ENST00000518815 TMEM131LA2VDJ0 1609 aa13.09□□□□□ -0.31
MTCL1-207ENST00000518815 SOX12O15370 315 aa13.09□□□□□ -0.31
MTCL1-207ENST00000518815 ASXL1Q8IXJ9 1541 aa13.09□□□□□ -0.31
MTCL1-207ENST00000518815 SETBP1Q9Y6X0 1596 aa13.09□□□□□ -0.31
MTCL1-207ENST00000518815 VGFO15240 615 aaPredicted RBP13.08□□□□□ -0.31
MTCL1-207ENST00000518815 BLMP54132 1417 aaPredicted RBP13.08□□□□□ -0.32
MTCL1-207ENST00000518815 IDI1Q13907 227 aa13.07□□□□□ -0.32
MTCL1-207ENST00000518815 LMOD2Q6P5Q4 547 aa13.07□□□□□ -0.32
MTCL1-207ENST00000518815 IQGAP1P46940 1657 aa13.07□□□□□ -0.32
MTCL1-207ENST00000518815 NEXMIFQ5QGS0 1516 aa13.07□□□□□ -0.32
MTCL1-207ENST00000518815 ADAMTS8Q9UP79 889 aa13.07□□□□□ -0.32
MTCL1-207ENST00000518815 PIK3C2GO75747 1445 aa13.07□□□□□ -0.32
MTCL1-207ENST00000518815 MORC1Q86VD1 984 aa13.06□□□□□ -0.32
MTCL1-207ENST00000518815 MS4A1P11836 297 aa13.06□□□□□ -0.32
MTCL1-207ENST00000518815 EXOC6Q8TAG9 804 aa13.06□□□□□ -0.32
MTCL1-207ENST00000518815 ARXQ96QS3 562 aa13.06□□□□□ -0.32
MTCL1-207ENST00000518815 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
MTCL1-207ENST00000518815 FER1L4A9Z1Z3 1794 aa13.05□□□□□ -0.32
MTCL1-207ENST00000518815 TRAK1Q9UPV9 953 aa13.05□□□□□ -0.32
MTCL1-207ENST00000518815 TNRQ92752 1358 aa13.03□□□□□ -0.32
MTCL1-207ENST00000518815 NLRP1Q9C000 1473 aa13.03□□□□□ -0.32
MTCL1-207ENST00000518815 SBNO2Q9Y2G9 1366 aa13.03□□□□□ -0.32
MTCL1-207ENST00000518815 HDGFP51858 240 aaKnown RBP13.03□□□□□ -0.32
MTCL1-207ENST00000518815 EVC2Q86UK5 1308 aa13.03□□□□□ -0.32
MTCL1-207ENST00000518815 ADGRF5Q8IZF2 1346 aa13.03□□□□□ -0.32
MTCL1-207ENST00000518815 E9PSI1 815 aa13.03□□□□□ -0.32
MTCL1-207ENST00000518815 FBXO31Q5XUX0 539 aaPredicted RBP13.03□□□□□ -0.32
MTCL1-207ENST00000518815 CDCA7LQ96GN5 454 aa13.02□□□□□ -0.32
MTCL1-207ENST00000518815 C14orf93Q9H972 538 aaKnown RBP13.02□□□□□ -0.32
MTCL1-207ENST00000518815 FRAT1Q92837 279 aaPredicted RBP13.02□□□□□ -0.33
MTCL1-207ENST00000518815 MAPK8IP3Q9UPT6 1336 aa13.02□□□□□ -0.33
MTCL1-207ENST00000518815 MYO5BQ9ULV0 1848 aa13.02□□□□□ -0.33
MTCL1-207ENST00000518815 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.01□□□□□ -0.33
MTCL1-207ENST00000518815 A2ML1A8K2U0 1454 aa13.01□□□□□ -0.33
MTCL1-207ENST00000518815 DDRGK1Q96HY6 314 aa13.01□□□□□ -0.33
MTCL1-207ENST00000518815 CGNL1Q0VF96 1302 aa13.01□□□□□ -0.33
MTCL1-207ENST00000518815 A0A0G2JS52 829 aa13□□□□□ -0.33
MTCL1-207ENST00000518815 PUS7Q96PZ0 661 aaKnown RBP13□□□□□ -0.33
MTCL1-207ENST00000518815 C3P01024 1663 aa13□□□□□ -0.33
MTCL1-207ENST00000518815 MYO3AQ8NEV4 1616 aa13□□□□□ -0.33
MTCL1-207ENST00000518815 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.99□□□□□ -0.33
MTCL1-207ENST00000518815 IPO9Q96P70 1041 aaKnown RBP12.99□□□□□ -0.33
MTCL1-207ENST00000518815 CRBNQ96SW2 442 aa12.99□□□□□ -0.33
MTCL1-207ENST00000518815 CENPQQ7L2Z9 268 aaPredicted RBP12.98□□□□□ -0.33
MTCL1-207ENST00000518815 MSH5O43196 834 aa12.98□□□□□ -0.33
MTCL1-207ENST00000518815 NUTM2FA1L443 756 aa12.97□□□□□ -0.33
MTCL1-207ENST00000518815 ADGRB1O14514 1584 aa12.97□□□□□ -0.33
MTCL1-207ENST00000518815 APAF1O14727 1248 aa12.97□□□□□ -0.33
MTCL1-207ENST00000518815 UPF2Q9HAU5 1272 aaKnown RBP12.97□□□□□ -0.33
MTCL1-207ENST00000518815 RIMS2Q9UQ26 1411 aa12.97□□□□□ -0.33
MTCL1-207ENST00000518815 CCDC146Q8IYE0 955 aa12.96□□□□□ -0.33
MTCL1-207ENST00000518815 PNNQ9H307 717 aaKnown RBP12.96□□□□□ -0.33
MTCL1-207ENST00000518815 UBR1Q8IWV7 1749 aa12.96□□□□□ -0.33
MTCL1-207ENST00000518815 NINLQ9Y2I6 1382 aa12.96□□□□□ -0.34
MTCL1-207ENST00000518815 SLFN5Q08AF3 891 aa12.96□□□□□ -0.34
MTCL1-207ENST00000518815 ADAMTSL3P82987 1691 aa12.95□□□□□ -0.34
MTCL1-207ENST00000518815 NSD2O96028 1365 aa12.95□□□□□ -0.34
MTCL1-207ENST00000518815 PLIN1O60240 522 aa12.95□□□□□ -0.34
MTCL1-207ENST00000518815 POLR3AO14802 1390 aaPredicted RBP12.95□□□□□ -0.34
MTCL1-207ENST00000518815 RUNDC1Q96C34 613 aa12.95□□□□□ -0.34
MTCL1-207ENST00000518815 TERF2IPQ9NYB0 399 aa12.95□□□□□ -0.34
MTCL1-207ENST00000518815 U2AF1L5P0DN76 240 aaPredicted RBP12.94□□□□□ -0.34
MTCL1-207ENST00000518815 U2AF1Q01081 240 aaKnown RBP eCLIP12.94□□□□□ -0.34
MTCL1-207ENST00000518815 NSD3Q9BZ95 1437 aa12.94□□□□□ -0.34
MTCL1-207ENST00000518815 PDE4AP27815 886 aa12.94□□□□□ -0.34
MTCL1-207ENST00000518815 DUSP27Q5VZP5 1158 aa12.94□□□□□ -0.34
MTCL1-207ENST00000518815 FTSJ3Q8IY81 847 aaKnown RBP12.94□□□□□ -0.34
MTCL1-207ENST00000518815 HAP1P54257 671 aaPredicted RBP12.94□□□□□ -0.34
MTCL1-207ENST00000518815 AAMPQ13685 434 aa12.94□□□□□ -0.34
MTCL1-207ENST00000518815 HSP90AA1P07900 732 aaKnown RBP12.93□□□□□ -0.34
MTCL1-207ENST00000518815 MYH16Q9H6N6 1097 aa12.93□□□□□ -0.34
MTCL1-207ENST00000518815 RGS3P49796 1198 aa12.93□□□□□ -0.34
MTCL1-207ENST00000518815 HDGFL2Q7Z4V5 671 aaPredicted RBP12.93□□□□□ -0.34
MTCL1-207ENST00000518815 ALKQ9UM73 1620 aa12.92□□□□□ -0.34
MTCL1-207ENST00000518815 NKTRP30414 1462 aaKnown RBP12.92□□□□□ -0.34
MTCL1-207ENST00000518815 TMEM2Q9UHN6 1383 aa12.92□□□□□ -0.34
MTCL1-207ENST00000518815 RIMS1Q86UR5 1692 aaKnown RBP12.92□□□□□ -0.34
MTCL1-207ENST00000518815 TMEM132EQ6IEE7 984 aa12.91□□□□□ -0.34
MTCL1-207ENST00000518815 SLIT1O75093 1534 aa12.9□□□□□ -0.34
MTCL1-207ENST00000518815 PLEKHH1Q9ULM0 1364 aa12.9□□□□□ -0.34
MTCL1-207ENST00000518815 SLC12A5Q9H2X9 1139 aa12.9□□□□□ -0.34
MTCL1-207ENST00000518815 ARHGEF28Q8N1W1 1705 aaKnown RBP12.9□□□□□ -0.34
MTCL1-207ENST00000518815 ATAD2Q6PL18 1390 aa12.9□□□□□ -0.34
MTCL1-207ENST00000518815 DLC1Q96QB1 1528 aa12.9□□□□□ -0.34
MTCL1-207ENST00000518815 PDE3AQ14432 1141 aa12.89□□□□□ -0.35
MTCL1-207ENST00000518815 QRICH2Q9H0J4 1663 aa12.89□□□□□ -0.35
MTCL1-207ENST00000518815 PAK3O75914 559 aaPredicted RBP12.89□□□□□ -0.35
MTCL1-207ENST00000518815 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
MTCL1-207ENST00000518815 THEMISQ8N1K5 641 aaPredicted RBP12.89□□□□□ -0.35
MTCL1-207ENST00000518815 ARHGAP23Q9P227 1491 aa12.89□□□□□ -0.35
MTCL1-207ENST00000518815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.88□□□□□ -0.35
MTCL1-207ENST00000518815 CARD14Q9BXL6 1004 aa12.88□□□□□ -0.35
MTCL1-207ENST00000518815 BACH2Q9BYV9 841 aa12.88□□□□□ -0.35
MTCL1-207ENST00000518815 EID1Q9Y6B2 187 aa12.88□□□□□ -0.35
MTCL1-207ENST00000518815 SETD1AO15047 1707 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms