RNA–Protein interactions for RNA: ENST00000518429.2

TSPAN18-203, Transcript of tetraspanin 18, humanhuman

TSL 1 (best)

Gene TSPAN18, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-203ENST00000518429 CDC42BPGQ6DT37 1551 aa28.47■■■□□ 2.15
TSPAN18-203ENST00000518429 NBPF8Q3BBV2 869 aa28.46■■■□□ 2.15
TSPAN18-203ENST00000518429 ARHGEF28Q8N1W1 1705 aaKnown RBP28.46■■■□□ 2.15
TSPAN18-203ENST00000518429 CLSPNQ9HAW4 1339 aa28.44■■■□□ 2.14
TSPAN18-203ENST00000518429 TRAK1Q9UPV9 953 aa28.44■■■□□ 2.14
TSPAN18-203ENST00000518429 PRAM1Q96QH2 718 aa28.43■■■□□ 2.14
TSPAN18-203ENST00000518429 TONSLQ96HA7 1378 aa28.41■■■□□ 2.14
TSPAN18-203ENST00000518429 C1orf167Q5SNV9 1468 aa28.4■■■□□ 2.14
TSPAN18-203ENST00000518429 FMN2Q9NZ56 1722 aa28.38■■■□□ 2.13
TSPAN18-203ENST00000518429 ADGRB2O60241 1585 aa28.38■■■□□ 2.13
TSPAN18-203ENST00000518429 BRINP3Q76B58 766 aa28.38■■■□□ 2.13
TSPAN18-203ENST00000518429 GPRASP1Q5JY77 1395 aa28.36■■■□□ 2.13
TSPAN18-203ENST00000518429 AHDC1Q5TGY3 1603 aaPredicted RBP28.36■■■□□ 2.13
TSPAN18-203ENST00000518429 NHSL1Q5SYE7 1610 aa28.33■■■□□ 2.13
TSPAN18-203ENST00000518429 SAFB2Q14151 953 aaKnown RBP eCLIP28.33■■■□□ 2.13
TSPAN18-203ENST00000518429 COL16A1Q07092 1604 aaPredicted RBP28.32■■■□□ 2.12
TSPAN18-203ENST00000518429 POGKQ9P215 609 aa28.32■■■□□ 2.12
TSPAN18-203ENST00000518429 RALGAPBQ86X10 1494 aa28.31■■■□□ 2.12
TSPAN18-203ENST00000518429 PHLPP1O60346 1717 aa28.31■■■□□ 2.12
TSPAN18-203ENST00000518429 USP32Q8NFA0 1604 aa28.29■■■□□ 2.12
TSPAN18-203ENST00000518429 ORAI2Q96SN7 254 aa28.29■■■□□ 2.12
TSPAN18-203ENST00000518429 RGPD8O14715 1765 aaPredicted RBP28.27■■■□□ 2.12
TSPAN18-203ENST00000518429 ROCK2O75116 1388 aaKnown RBP28.27■■■□□ 2.12
TSPAN18-203ENST00000518429 CCER1Q8TC90 406 aaPredicted RBP28.26■■■□□ 2.11
TSPAN18-203ENST00000518429 TIMELESSQ9UNS1 1208 aa28.26■■■□□ 2.11
TSPAN18-203ENST00000518429 MINK1Q8N4C8 1332 aaPredicted RBP28.25■■■□□ 2.11
TSPAN18-203ENST00000518429 HIRIP3Q9BW71 556 aaPredicted RBP28.24■■■□□ 2.11
TSPAN18-203ENST00000518429 NUTM2FA1L443 756 aa28.22■■■□□ 2.11
TSPAN18-203ENST00000518429 DDX17Q92841 729 aaKnown RBP28.22■■■□□ 2.11
TSPAN18-203ENST00000518429 QRICH2Q9H0J4 1663 aa28.21■■■□□ 2.11
TSPAN18-203ENST00000518429 PRR36Q9H6K5 1346 aa28.2■■■□□ 2.11
TSPAN18-203ENST00000518429 ANKARQ7Z5J8 1434 aa28.2■■■□□ 2.11
TSPAN18-203ENST00000518429 WASLO00401 505 aaPredicted RBP28.2■■■□□ 2.1
TSPAN18-203ENST00000518429 CENPJQ9HC77 1338 aaPredicted RBP28.19■■■□□ 2.1
TSPAN18-203ENST00000518429 TULP4Q9NRJ4 1543 aa28.19■■■□□ 2.1
TSPAN18-203ENST00000518429 ESCO1Q5FWF5 840 aa28.18■■■□□ 2.1
TSPAN18-203ENST00000518429 KIF1AQ12756 1690 aa28.16■■■□□ 2.1
TSPAN18-203ENST00000518429 SOS2Q07890 1332 aaPredicted RBP28.16■■■□□ 2.1
TSPAN18-203ENST00000518429 ATP7BP35670 1465 aa28.15■■■□□ 2.1
TSPAN18-203ENST00000518429 PXDNQ92626 1479 aa28.15■■■□□ 2.1
TSPAN18-203ENST00000518429 CARD11Q9BXL7 1154 aa28.14■■■□□ 2.1
TSPAN18-203ENST00000518429 SHPRHQ149N8 1683 aa28.13■■■□□ 2.09
TSPAN18-203ENST00000518429 JCADQ9P266 1359 aa28.12■■■□□ 2.09
TSPAN18-203ENST00000518429 CDK19Q9BWU1 502 aa28.11■■■□□ 2.09
TSPAN18-203ENST00000518429 MED1Q15648 1581 aaPredicted RBP28.11■■■□□ 2.09
TSPAN18-203ENST00000518429 EIF3AQ14152 1382 aaKnown RBP28.11■■■□□ 2.09
TSPAN18-203ENST00000518429 TOPAZ1Q8N9V7 1692 aa28.1■■■□□ 2.09
TSPAN18-203ENST00000518429 FOXO3O43524 673 aa28.09■■■□□ 2.09
TSPAN18-203ENST00000518429 PHF8Q9UPP1 1060 aa28.09■■■□□ 2.09
TSPAN18-203ENST00000518429 NPHP3Q7Z494 1330 aa28.08■■■□□ 2.09
TSPAN18-203ENST00000518429 SBNO2Q9Y2G9 1366 aa28.08■■■□□ 2.09
TSPAN18-203ENST00000518429 NUDT16Q96DE0 195 aaKnown RBP28.06■■■□□ 2.08
TSPAN18-203ENST00000518429 ITSN1Q15811 1721 aa28.05■■■□□ 2.08
TSPAN18-203ENST00000518429 LRRC59Q96AG4 307 aaKnown RBP28.05■■■□□ 2.08
TSPAN18-203ENST00000518429 PNPLA6Q8IY17 1366 aa28.04■■■□□ 2.08
TSPAN18-203ENST00000518429 XPCQ01831 940 aaPredicted RBP28.02■■■□□ 2.08
TSPAN18-203ENST00000518429 PMFBP1Q8TBY8 1022 aa28.02■■■□□ 2.08
TSPAN18-203ENST00000518429 LRP6O75581 1613 aa28.02■■■□□ 2.08
TSPAN18-203ENST00000518429 TRPM3Q9HCF6 1732 aaPredicted RBP28.01■■■□□ 2.07
TSPAN18-203ENST00000518429 COL22A1Q8NFW1 1626 aaPredicted RBP28■■■□□ 2.07
TSPAN18-203ENST00000518429 CABP2Q9NPB3 220 aa28■■■□□ 2.07
TSPAN18-203ENST00000518429 TESK2Q96S53 571 aa27.99■■■□□ 2.07
TSPAN18-203ENST00000518429 SPATA31A6Q5VVP1 1343 aa27.98■■■□□ 2.07
TSPAN18-203ENST00000518429 KRT28Q7Z3Y7 464 aa27.98■■■□□ 2.07
TSPAN18-203ENST00000518429 CCDC61Q9Y6R9 512 aa27.98■■■□□ 2.07
TSPAN18-203ENST00000518429 PLEKHG3A1L390 1219 aa27.97■■■□□ 2.07
TSPAN18-203ENST00000518429 POLR3AO14802 1390 aaPredicted RBP27.97■■■□□ 2.07
TSPAN18-203ENST00000518429 EVC2Q86UK5 1308 aa27.96■■■□□ 2.07
TSPAN18-203ENST00000518429 ST20-MTHFSA0A0A6YYL1 179 aa27.96■■■□□ 2.07
TSPAN18-203ENST00000518429 USP47Q96K76 1375 aa27.96■■■□□ 2.07
TSPAN18-203ENST00000518429 SPATA31A3Q5VYP0 1347 aa27.95■■■□□ 2.07
TSPAN18-203ENST00000518429 SRPK2P78362 688 aaKnown RBP27.95■■■□□ 2.06
TSPAN18-203ENST00000518429 SBNO1A3KN83 1393 aa27.94■■■□□ 2.06
TSPAN18-203ENST00000518429 PPIP5K1Q6PFW1 1433 aa27.92■■■□□ 2.06
TSPAN18-203ENST00000518429 ALS2Q96Q42 1657 aa27.92■■■□□ 2.06
TSPAN18-203ENST00000518429 TNS3Q68CZ2 1445 aa27.92■■■□□ 2.06
TSPAN18-203ENST00000518429 ACEP12821 1306 aa27.91■■■□□ 2.06
TSPAN18-203ENST00000518429 DISP3Q9P2K9 1392 aa27.9■■■□□ 2.06
TSPAN18-203ENST00000518429 PSME1Q06323 249 aa27.9■■■□□ 2.06
TSPAN18-203ENST00000518429 NGDNQ8NEJ9 315 aaKnown RBP27.88■■■□□ 2.05
TSPAN18-203ENST00000518429 RGS17Q9UGC6 210 aaPredicted RBP27.88■■■□□ 2.05
TSPAN18-203ENST00000518429 CABP1Q9NZU7 370 aa27.87■■■□□ 2.05
TSPAN18-203ENST00000518429 PUS7Q96PZ0 661 aaKnown RBP27.84■■■□□ 2.05
TSPAN18-203ENST00000518429 ATAD2Q6PL18 1390 aa27.84■■■□□ 2.05
TSPAN18-203ENST00000518429 ABCA3Q99758 1704 aa27.83■■■□□ 2.05
TSPAN18-203ENST00000518429 SSH2Q76I76 1423 aa27.83■■■□□ 2.05
TSPAN18-203ENST00000518429 CRYBG1Q9Y4K1 1723 aa27.82■■■□□ 2.04
TSPAN18-203ENST00000518429 AKAP12Q02952 1782 aa27.82■■■□□ 2.04
TSPAN18-203ENST00000518429 NUTM2BA6NNL0 878 aaPredicted RBP27.82■■■□□ 2.04
TSPAN18-203ENST00000518429 NUTM2EB1AL46 878 aaPredicted RBP27.82■■■□□ 2.04
TSPAN18-203ENST00000518429 NUTM2AQ8IVF1 878 aaPredicted RBP27.82■■■□□ 2.04
TSPAN18-203ENST00000518429 CD163L1Q9NR16 1453 aa27.81■■■□□ 2.04
TSPAN18-203ENST00000518429 ARHGEF10O15013 1369 aa27.8■■■□□ 2.04
TSPAN18-203ENST00000518429 CPSF1Q10570 1443 aaKnown RBP27.8■■■□□ 2.04
TSPAN18-203ENST00000518429 MARF1Q9Y4F3 1742 aaKnown RBP27.78■■■□□ 2.04
TSPAN18-203ENST00000518429 USP6P35125 1406 aa27.78■■■□□ 2.04
TSPAN18-203ENST00000518429 NRKQ7Z2Y5 1582 aa27.76■■■□□ 2.03
TSPAN18-203ENST00000518429 SLC24A1O60721 1099 aa27.75■■■□□ 2.03
TSPAN18-203ENST00000518429 BRD4O60885 1362 aaPredicted RBP27.74■■■□□ 2.03
TSPAN18-203ENST00000518429 CABLES1Q8TDN4 633 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms