RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 HRCP23327 699 aa15.46■□□□□ 0.07
SPIDR-205ENST00000518060 LRRC59Q96AG4 307 aaKnown RBP15.46■□□□□ 0.07
SPIDR-205ENST00000518060 PLEKHH1Q9ULM0 1364 aa15.46■□□□□ 0.07
SPIDR-205ENST00000518060 CDC42BPGQ6DT37 1551 aa15.45■□□□□ 0.06
SPIDR-205ENST00000518060 SHPRHQ149N8 1683 aa15.45■□□□□ 0.06
SPIDR-205ENST00000518060 ESCO1Q5FWF5 840 aa15.45■□□□□ 0.06
SPIDR-205ENST00000518060 POTEAQ6S8J7 498 aa15.45■□□□□ 0.06
SPIDR-205ENST00000518060 DCAF11Q8TEB1 546 aa15.45■□□□□ 0.06
SPIDR-205ENST00000518060 C14orf93Q9H972 538 aaKnown RBP15.45■□□□□ 0.06
SPIDR-205ENST00000518060 NHSL1Q5SYE7 1610 aa15.45■□□□□ 0.06
SPIDR-205ENST00000518060 DHX57Q6P158 1386 aaKnown RBP15.45■□□□□ 0.06
SPIDR-205ENST00000518060 ABCC11Q96J66 1382 aa15.45■□□□□ 0.06
SPIDR-205ENST00000518060 SAFB2Q14151 953 aaKnown RBP eCLIP15.44■□□□□ 0.06
SPIDR-205ENST00000518060 NRXN1Q9ULB1 1477 aa15.44■□□□□ 0.06
SPIDR-205ENST00000518060 LAMC1P11047 1609 aa15.43■□□□□ 0.06
SPIDR-205ENST00000518060 POGKQ9P215 609 aa15.42■□□□□ 0.06
SPIDR-205ENST00000518060 KNDC1Q76NI1 1749 aa15.42■□□□□ 0.06
SPIDR-205ENST00000518060 PNPLA6Q8IY17 1366 aa15.41■□□□□ 0.06
SPIDR-205ENST00000518060 XPCQ01831 940 aaPredicted RBP15.41■□□□□ 0.06
SPIDR-205ENST00000518060 PRAM1Q96QH2 718 aa15.41■□□□□ 0.06
SPIDR-205ENST00000518060 ZNF772Q68DY9 489 aaPredicted RBP15.4■□□□□ 0.06
SPIDR-205ENST00000518060 NPHP3Q7Z494 1330 aa15.4■□□□□ 0.06
SPIDR-205ENST00000518060 ADAMTS2O95450 1211 aa15.39■□□□□ 0.05
SPIDR-205ENST00000518060 C8orf37Q96NL8 207 aa15.39■□□□□ 0.05
SPIDR-205ENST00000518060 TRAK1Q9UPV9 953 aa15.39■□□□□ 0.05
SPIDR-205ENST00000518060 FOXO3O43524 673 aa15.38■□□□□ 0.05
SPIDR-205ENST00000518060 SOS2Q07890 1332 aaPredicted RBP15.38■□□□□ 0.05
SPIDR-205ENST00000518060 AFF2P51816 1311 aa15.37■□□□□ 0.05
SPIDR-205ENST00000518060 SIRT1Q96EB6 747 aa15.36■□□□□ 0.05
SPIDR-205ENST00000518060 HIRIP3Q9BW71 556 aaPredicted RBP15.35■□□□□ 0.05
SPIDR-205ENST00000518060 ADGRB1O14514 1584 aa15.34■□□□□ 0.05
SPIDR-205ENST00000518060 NGLY1Q96IV0 654 aa15.34■□□□□ 0.05
SPIDR-205ENST00000518060 STAC3Q96MF2 364 aa15.34■□□□□ 0.05
SPIDR-205ENST00000518060 MINK1Q8N4C8 1332 aaPredicted RBP15.34■□□□□ 0.05
SPIDR-205ENST00000518060 FMN2Q9NZ56 1722 aa15.34■□□□□ 0.05
SPIDR-205ENST00000518060 DLC1Q96QB1 1528 aa15.33■□□□□ 0.05
SPIDR-205ENST00000518060 PLEKHG5O94827 1062 aa15.33■□□□□ 0.04
SPIDR-205ENST00000518060 PXDNQ92626 1479 aa15.33■□□□□ 0.04
SPIDR-205ENST00000518060 RXRBP28702 533 aa15.32■□□□□ 0.04
SPIDR-205ENST00000518060 PHF8Q9UPP1 1060 aa15.32■□□□□ 0.04
SPIDR-205ENST00000518060 KIF1AQ12756 1690 aa15.31■□□□□ 0.04
SPIDR-205ENST00000518060 KRT28Q7Z3Y7 464 aa15.3■□□□□ 0.04
SPIDR-205ENST00000518060 HAP1P54257 671 aaPredicted RBP15.29■□□□□ 0.04
SPIDR-205ENST00000518060 LMOD2Q6P5Q4 547 aa15.29■□□□□ 0.04
SPIDR-205ENST00000518060 PMFBP1Q8TBY8 1022 aa15.29■□□□□ 0.04
SPIDR-205ENST00000518060 EIF3AQ14152 1382 aaKnown RBP15.28■□□□□ 0.04
SPIDR-205ENST00000518060 PSME1Q06323 249 aa15.28■□□□□ 0.04
SPIDR-205ENST00000518060 ANKARQ7Z5J8 1434 aa15.27■□□□□ 0.04
SPIDR-205ENST00000518060 NEUROD1Q13562 356 aa15.27■□□□□ 0.04
SPIDR-205ENST00000518060 QTRT2Q9H974 415 aaKnown RBP15.27■□□□□ 0.04
SPIDR-205ENST00000518060 USP21Q9UK80 565 aa15.27■□□□□ 0.04
SPIDR-205ENST00000518060 ADGRB2O60241 1585 aa15.27■□□□□ 0.03
SPIDR-205ENST00000518060 SPATA31A3Q5VYP0 1347 aa15.26■□□□□ 0.03
SPIDR-205ENST00000518060 COL22A1Q8NFW1 1626 aaPredicted RBP15.26■□□□□ 0.03
SPIDR-205ENST00000518060 TNS3Q68CZ2 1445 aa15.26■□□□□ 0.03
SPIDR-205ENST00000518060 WASLO00401 505 aaPredicted RBP15.25■□□□□ 0.03
SPIDR-205ENST00000518060 RBM6P78332 1123 aaKnown RBP15.24■□□□□ 0.03
SPIDR-205ENST00000518060 SIN3AQ96ST3 1273 aa15.24■□□□□ 0.03
SPIDR-205ENST00000518060 TULP4Q9NRJ4 1543 aa15.23■□□□□ 0.03
SPIDR-205ENST00000518060 NBPF1Q3BBV0 1214 aa15.23■□□□□ 0.03
SPIDR-205ENST00000518060 NGDNQ8NEJ9 315 aaKnown RBP15.23■□□□□ 0.03
SPIDR-205ENST00000518060 GPRASP1Q5JY77 1395 aa15.23■□□□□ 0.03
SPIDR-205ENST00000518060 PRR36Q9H6K5 1346 aa15.22■□□□□ 0.03
SPIDR-205ENST00000518060 RGPD8O14715 1765 aaPredicted RBP15.22■□□□□ 0.03
SPIDR-205ENST00000518060 CABLES1Q8TDN4 633 aa15.22■□□□□ 0.03
SPIDR-205ENST00000518060 L3MBTL2Q969R5 705 aa15.22■□□□□ 0.03
SPIDR-205ENST00000518060 TRPC5Q9UL62 973 aaPredicted RBP15.22■□□□□ 0.03
SPIDR-205ENST00000518060 ARHGEF28Q8N1W1 1705 aaKnown RBP15.22■□□□□ 0.03
SPIDR-205ENST00000518060 USP32Q8NFA0 1604 aa15.21■□□□□ 0.03
SPIDR-205ENST00000518060 SBNO1A3KN83 1393 aa15.21■□□□□ 0.02
SPIDR-205ENST00000518060 ARHGEF10O15013 1369 aa15.21■□□□□ 0.02
SPIDR-205ENST00000518060 CDK12Q9NYV4 1490 aaPredicted RBP15.2■□□□□ 0.02
SPIDR-205ENST00000518060 RGS12O14924 1447 aa15.2■□□□□ 0.02
SPIDR-205ENST00000518060 PAK3O75914 559 aaPredicted RBP15.2■□□□□ 0.02
SPIDR-205ENST00000518060 FNBP4Q8N3X1 1017 aaPredicted RBP15.2■□□□□ 0.02
SPIDR-205ENST00000518060 NUDT16Q96DE0 195 aaKnown RBP15.19■□□□□ 0.02
SPIDR-205ENST00000518060 CDK19Q9BWU1 502 aa15.19■□□□□ 0.02
SPIDR-205ENST00000518060 KIAA1210Q9ULL0 1709 aa15.19■□□□□ 0.02
SPIDR-205ENST00000518060 CENPJQ9HC77 1338 aaPredicted RBP15.17■□□□□ 0.02
SPIDR-205ENST00000518060 ATP7BP35670 1465 aa15.17■□□□□ 0.02
SPIDR-205ENST00000518060 SRPK2P78362 688 aaKnown RBP15.17■□□□□ 0.02
SPIDR-205ENST00000518060 ATRNO75882 1429 aa15.17■□□□□ 0.02
SPIDR-205ENST00000518060 ROCK2O75116 1388 aaKnown RBP15.16■□□□□ 0.02
SPIDR-205ENST00000518060 TRIM26Q12899 539 aaPredicted RBP15.15■□□□□ 0.02
SPIDR-205ENST00000518060 CCDC9Q9Y3X0 531 aaKnown RBP15.15■□□□□ 0.02
SPIDR-205ENST00000518060 BCL9LQ86UU0 1499 aa15.14■□□□□ 0.01
SPIDR-205ENST00000518060 UNC5CLQ8IV45 518 aa15.14■□□□□ 0.01
SPIDR-205ENST00000518060 UPF1Q92900 1129 aaKnown RBP eCLIP15.14■□□□□ 0.01
SPIDR-205ENST00000518060 MARF1Q9Y4F3 1742 aaKnown RBP15.14■□□□□ 0.01
SPIDR-205ENST00000518060 ITSN1Q15811 1721 aa15.13■□□□□ 0.01
SPIDR-205ENST00000518060 TONSLQ96HA7 1378 aa15.12■□□□□ 0.01
SPIDR-205ENST00000518060 GJD4Q96KN9 370 aaPredicted RBP15.12■□□□□ 0.01
SPIDR-205ENST00000518060 CABP2Q9NPB3 220 aa15.12■□□□□ 0.01
SPIDR-205ENST00000518060 CCDC61Q9Y6R9 512 aa15.12■□□□□ 0.01
SPIDR-205ENST00000518060 SLIT2O94813 1529 aa15.12■□□□□ 0.01
SPIDR-205ENST00000518060 TRPM3Q9HCF6 1732 aaPredicted RBP15.12■□□□□ 0.01
SPIDR-205ENST00000518060 ATAD2Q6PL18 1390 aa15.11■□□□□ 0.01
SPIDR-205ENST00000518060 NUTM2GQ5VZR2 741 aa15.11■□□□□ 0.01
SPIDR-205ENST00000518060 ACEP12821 1306 aa15.11■□□□□ 0.01
SPIDR-205ENST00000518060 PPIP5K1Q6PFW1 1433 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms