RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 C6orf132Q5T0Z8 1188 aa10.44□□□□□ -0.74
CPS1-210ENST00000518043 BARGINQ6ZT62 677 aa10.44□□□□□ -0.74
CPS1-210ENST00000518043 MARVELD3Q96A59 401 aa10.44□□□□□ -0.74
CPS1-210ENST00000518043 DAPK1P53355 1430 aa10.43□□□□□ -0.74
CPS1-210ENST00000518043 EMP3P54852 163 aa10.43□□□□□ -0.74
CPS1-210ENST00000518043 GCC2Q8IWJ2 1684 aa10.42□□□□□ -0.74
CPS1-210ENST00000518043 ADGBQ8N7X0 1667 aa10.42□□□□□ -0.74
CPS1-210ENST00000518043 FAM50AQ14320 339 aaKnown RBP10.42□□□□□ -0.74
CPS1-210ENST00000518043 BCL2L12Q9HB09 334 aa10.42□□□□□ -0.74
CPS1-210ENST00000518043 NPDC1Q9NQX5 325 aaPredicted RBP10.42□□□□□ -0.74
CPS1-210ENST00000518043 CFDP1Q9UEE9 299 aaPredicted RBP10.42□□□□□ -0.74
CPS1-210ENST00000518043 SHANK2Q9UPX8 1470 aa10.42□□□□□ -0.74
CPS1-210ENST00000518043 HIC1Q14526 733 aa10.41□□□□□ -0.74
CPS1-210ENST00000518043 VARS2Q5ST30 1063 aaKnown RBP10.41□□□□□ -0.74
CPS1-210ENST00000518043 FANCAO15360 1455 aa10.41□□□□□ -0.74
CPS1-210ENST00000518043 KIAA1107Q9UPP5 1409 aa10.41□□□□□ -0.74
CPS1-210ENST00000518043 MAST1Q9Y2H9 1570 aa10.4□□□□□ -0.74
CPS1-210ENST00000518043 GNPATO15228 680 aa10.4□□□□□ -0.74
CPS1-210ENST00000518043 LCE2DQ5TA82 110 aaPredicted RBP10.4□□□□□ -0.74
CPS1-210ENST00000518043 ADGRL2O95490 1459 aa10.4□□□□□ -0.74
CPS1-210ENST00000518043 CD109Q6YHK3 1445 aa10.4□□□□□ -0.75
CPS1-210ENST00000518043 AKNAQ7Z591 1439 aa10.4□□□□□ -0.75
CPS1-210ENST00000518043 CFAP74Q9C0B2 1584 aa10.39□□□□□ -0.75
CPS1-210ENST00000518043 CCDC141Q6ZP82 1450 aa10.39□□□□□ -0.75
CPS1-210ENST00000518043 PLEKHH2Q8IVE3 1493 aa10.39□□□□□ -0.75
CPS1-210ENST00000518043 SLC24A3Q9HC58 644 aa10.39□□□□□ -0.75
CPS1-210ENST00000518043 KDM6BO15054 1643 aa10.39□□□□□ -0.75
CPS1-210ENST00000518043 FAM205CA6NFA0 338 aa10.38□□□□□ -0.75
CPS1-210ENST00000518043 PTPREP23469 700 aa10.38□□□□□ -0.75
CPS1-210ENST00000518043 KRI1Q8N9T8 703 aaKnown RBP10.38□□□□□ -0.75
CPS1-210ENST00000518043 CERKQ8TCT0 537 aa10.38□□□□□ -0.75
CPS1-210ENST00000518043 HFM1A2PYH4 1435 aa10.38□□□□□ -0.75
CPS1-210ENST00000518043 TRAPPC8Q9Y2L5 1435 aa10.38□□□□□ -0.75
CPS1-210ENST00000518043 INO80Q9ULG1 1556 aaPredicted RBP10.38□□□□□ -0.75
CPS1-210ENST00000518043 NEO1Q92859 1461 aa10.37□□□□□ -0.75
CPS1-210ENST00000518043 TSPOAP1O95153 1857 aa10.37□□□□□ -0.75
CPS1-210ENST00000518043 NAIPQ13075 1403 aa10.37□□□□□ -0.75
CPS1-210ENST00000518043 FRMPD1Q5SYB0 1578 aa10.37□□□□□ -0.75
CPS1-210ENST00000518043 ADGRL1O94910 1474 aa10.36□□□□□ -0.75
CPS1-210ENST00000518043 PLXNC1O60486 1568 aa10.36□□□□□ -0.75
CPS1-210ENST00000518043 KDM5CP41229 1560 aa10.36□□□□□ -0.75
CPS1-210ENST00000518043 FECHP22830 423 aa10.36□□□□□ -0.75
CPS1-210ENST00000518043 ITGAEP38570 1179 aa10.36□□□□□ -0.75
CPS1-210ENST00000518043 ZNF777Q9ULD5 760 aaPredicted RBP10.36□□□□□ -0.75
CPS1-210ENST00000518043 ZFYVE16Q7Z3T8 1539 aa10.36□□□□□ -0.75
CPS1-210ENST00000518043 ROCK1Q13464 1354 aa10.36□□□□□ -0.75
CPS1-210ENST00000518043 RICTORQ6R327 1708 aa10.36□□□□□ -0.75
CPS1-210ENST00000518043 C9orf84Q5VXU9 1444 aa10.35□□□□□ -0.75
CPS1-210ENST00000518043 COL9A1P20849 921 aa10.35□□□□□ -0.75
CPS1-210ENST00000518043 EFCAB2Q5VUJ9 269 aa10.35□□□□□ -0.75
CPS1-210ENST00000518043 POGZQ7Z3K3 1410 aa10.34□□□□□ -0.75
CPS1-210ENST00000518043 HNRNPMP52272 730 aaKnown RBP eCLIP10.34□□□□□ -0.75
CPS1-210ENST00000518043 MAP2K5Q13163 448 aa10.34□□□□□ -0.75
CPS1-210ENST00000518043 KCNK17Q96T54 332 aa10.34□□□□□ -0.75
CPS1-210ENST00000518043 MINK1Q8N4C8 1332 aaPredicted RBP10.33□□□□□ -0.76
CPS1-210ENST00000518043 NCOA1Q15788 1441 aa10.33□□□□□ -0.76
CPS1-210ENST00000518043 PPP1R3GB7ZBB8 358 aa10.33□□□□□ -0.76
CPS1-210ENST00000518043 FAM69CQ0P6D2 419 aa10.33□□□□□ -0.76
CPS1-210ENST00000518043 HS3ST6Q96QI5 342 aa10.33□□□□□ -0.76
CPS1-210ENST00000518043 RAB3GAP2Q9H2M9 1393 aa10.33□□□□□ -0.76
CPS1-210ENST00000518043 KIDINS220Q9ULH0 1771 aa10.33□□□□□ -0.76
CPS1-210ENST00000518043 SCAPERQ9BY12 1400 aa10.33□□□□□ -0.76
CPS1-210ENST00000518043 SETD5Q9C0A6 1442 aa10.33□□□□□ -0.76
CPS1-210ENST00000518043 POTEB3A0JP26 581 aa10.32□□□□□ -0.76
CPS1-210ENST00000518043 POTEBQ6S5H4 581 aa10.32□□□□□ -0.76
CPS1-210ENST00000518043 ZNF687Q8N1G0 1237 aa10.32□□□□□ -0.76
CPS1-210ENST00000518043 AK7Q96M32 723 aa10.32□□□□□ -0.76
CPS1-210ENST00000518043 IRF6O14896 467 aa10.31□□□□□ -0.76
CPS1-210ENST00000518043 PRSS12P56730 875 aa10.31□□□□□ -0.76
CPS1-210ENST00000518043 POTEEQ6S8J3 1075 aa10.31□□□□□ -0.76
CPS1-210ENST00000518043 PADI6Q6TGC4 694 aa10.31□□□□□ -0.76
CPS1-210ENST00000518043 RBM27Q9P2N5 1060 aaKnown RBP10.31□□□□□ -0.76
CPS1-210ENST00000518043 ATP7AQ04656 1500 aa10.31□□□□□ -0.76
CPS1-210ENST00000518043 COL17A1Q9UMD9 1497 aaPredicted RBP10.3□□□□□ -0.76
CPS1-210ENST00000518043 ABCA6Q8N139 1617 aa10.3□□□□□ -0.76
CPS1-210ENST00000518043 ZMYM4Q5VZL5 1548 aa10.3□□□□□ -0.76
CPS1-210ENST00000518043 ARHGAP33O14559 1287 aa10.3□□□□□ -0.76
CPS1-210ENST00000518043 PSEN2P49810 448 aa10.3□□□□□ -0.76
CPS1-210ENST00000518043 CCDC102AQ96A19 550 aa10.3□□□□□ -0.76
CPS1-210ENST00000518043 CDCA7LQ96GN5 454 aa10.3□□□□□ -0.76
CPS1-210ENST00000518043 CHIC2Q9UKJ5 165 aa10.3□□□□□ -0.76
CPS1-210ENST00000518043 HECW2Q9P2P5 1572 aa10.3□□□□□ -0.76
CPS1-210ENST00000518043 ZNF518AQ6AHZ1 1483 aa10.3□□□□□ -0.76
CPS1-210ENST00000518043 TEX14Q8IWB6 1497 aa10.3□□□□□ -0.76
CPS1-210ENST00000518043 TTC13Q8NBP0 860 aa10.29□□□□□ -0.76
CPS1-210ENST00000518043 RRP7BPQ9NSQ0 103 aa10.29□□□□□ -0.76
CPS1-210ENST00000518043 RTEL1-TNFRSF6BF6WH68 1400 aa10.29□□□□□ -0.76
CPS1-210ENST00000518043 PBX2P40425 430 aa10.28□□□□□ -0.76
CPS1-210ENST00000518043 RSPH4AQ5TD94 716 aa10.28□□□□□ -0.76
CPS1-210ENST00000518043 AFAP1Q8N556 730 aa10.28□□□□□ -0.76
CPS1-210ENST00000518043 AXIN2Q9Y2T1 843 aa10.28□□□□□ -0.76
CPS1-210ENST00000518043 DENND4BO75064 1496 aaPredicted RBP10.28□□□□□ -0.76
CPS1-210ENST00000518043 MLH3Q9UHC1 1453 aa10.28□□□□□ -0.76
CPS1-210ENST00000518043 DHX57Q6P158 1386 aaKnown RBP10.27□□□□□ -0.76
CPS1-210ENST00000518043 ANKRD30AQ9BXX3 1397 aa10.27□□□□□ -0.76
CPS1-210ENST00000518043 KIF15Q9NS87 1388 aa10.27□□□□□ -0.76
CPS1-210ENST00000518043 DIP2CQ9Y2E4 1556 aa10.27□□□□□ -0.76
CPS1-210ENST00000518043 UNC13BO14795 1591 aa10.26□□□□□ -0.77
CPS1-210ENST00000518043 TRIM66O15016 1216 aa10.26□□□□□ -0.77
CPS1-210ENST00000518043 TSKSQ9UJT2 592 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms