RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 STRCP1A6NGW2 1772 aa14.75□□□□□ -0.05
PABPC1-203ENST00000517921 PTCH1Q13635 1447 aa14.75□□□□□ -0.05
PABPC1-203ENST00000517921 FAM135BQ49AJ0 1406 aa14.75□□□□□ -0.05
PABPC1-203ENST00000517921 TMF1P82094 1093 aa14.74□□□□□ -0.05
PABPC1-203ENST00000517921 PLEKHH1Q9ULM0 1364 aa14.73□□□□□ -0.05
PABPC1-203ENST00000517921 DDX10Q13206 875 aaKnown RBP14.73□□□□□ -0.05
PABPC1-203ENST00000517921 NALCNQ8IZF0 1738 aa14.72□□□□□ -0.05
PABPC1-203ENST00000517921 IQSEC2Q5JU85 1478 aa14.72□□□□□ -0.05
PABPC1-203ENST00000517921 PRAM1Q96QH2 718 aa14.72□□□□□ -0.05
PABPC1-203ENST00000517921 ROBO2Q9HCK4 1378 aa14.72□□□□□ -0.05
PABPC1-203ENST00000517921 UBAP1LF5GYI3 381 aa14.71□□□□□ -0.05
PABPC1-203ENST00000517921 SLC24A1O60721 1099 aa14.7□□□□□ -0.06
PABPC1-203ENST00000517921 SIRT1Q96EB6 747 aa14.7□□□□□ -0.06
PABPC1-203ENST00000517921 SAFB2Q14151 953 aaKnown RBP eCLIP14.69□□□□□ -0.06
PABPC1-203ENST00000517921 POLR3GLQ9BT43 218 aa14.69□□□□□ -0.06
PABPC1-203ENST00000517921 POGKQ9P215 609 aa14.69□□□□□ -0.06
PABPC1-203ENST00000517921 RGPD8O14715 1765 aaPredicted RBP14.69□□□□□ -0.06
PABPC1-203ENST00000517921 TOPAZ1Q8N9V7 1692 aa14.68□□□□□ -0.06
PABPC1-203ENST00000517921 CDCA8Q53HL2 280 aa14.68□□□□□ -0.06
PABPC1-203ENST00000517921 WAPLQ7Z5K2 1190 aa14.68□□□□□ -0.06
PABPC1-203ENST00000517921 AMOTL2Q9Y2J4 779 aa14.68□□□□□ -0.06
PABPC1-203ENST00000517921 ITSN1Q15811 1721 aa14.67□□□□□ -0.06
PABPC1-203ENST00000517921 MINK1Q8N4C8 1332 aaPredicted RBP14.66□□□□□ -0.06
PABPC1-203ENST00000517921 FMN2Q9NZ56 1722 aa14.66□□□□□ -0.06
PABPC1-203ENST00000517921 XIRP1Q702N8 1843 aaKnown RBP14.66□□□□□ -0.06
PABPC1-203ENST00000517921 NKTRP30414 1462 aaKnown RBP14.66□□□□□ -0.06
PABPC1-203ENST00000517921 EVC2Q86UK5 1308 aa14.66□□□□□ -0.06
PABPC1-203ENST00000517921 TOM1O60784 492 aa14.65□□□□□ -0.06
PABPC1-203ENST00000517921 KCNA6P17658 529 aa14.65□□□□□ -0.06
PABPC1-203ENST00000517921 USP32Q8NFA0 1604 aa14.65□□□□□ -0.06
PABPC1-203ENST00000517921 AKAP12Q02952 1782 aa14.65□□□□□ -0.06
PABPC1-203ENST00000517921 SCAF1Q9H7N4 1312 aaKnown RBP14.65□□□□□ -0.06
PABPC1-203ENST00000517921 CDC42BPGQ6DT37 1551 aa14.64□□□□□ -0.07
PABPC1-203ENST00000517921 PUS7Q96PZ0 661 aaKnown RBP14.63□□□□□ -0.07
PABPC1-203ENST00000517921 ATAD2Q6PL18 1390 aa14.61□□□□□ -0.07
PABPC1-203ENST00000517921 MON2Q7Z3U7 1717 aa14.61□□□□□ -0.07
PABPC1-203ENST00000517921 PIP4K2BP78356 416 aa14.61□□□□□ -0.07
PABPC1-203ENST00000517921 CABP2Q9NPB3 220 aa14.61□□□□□ -0.07
PABPC1-203ENST00000517921 ATP7BP35670 1465 aa14.61□□□□□ -0.07
PABPC1-203ENST00000517921 KIF20BQ96Q89 1820 aa14.59□□□□□ -0.07
PABPC1-203ENST00000517921 ANKRD26Q9UPS8 1709 aa14.59□□□□□ -0.07
PABPC1-203ENST00000517921 WASLO00401 505 aaPredicted RBP14.59□□□□□ -0.07
PABPC1-203ENST00000517921 CDK19Q9BWU1 502 aa14.59□□□□□ -0.07
PABPC1-203ENST00000517921 NINLQ9Y2I6 1382 aa14.59□□□□□ -0.07
PABPC1-203ENST00000517921 ADGRL3Q9HAR2 1447 aa14.58□□□□□ -0.07
PABPC1-203ENST00000517921 SRPK2P78362 688 aaKnown RBP14.58□□□□□ -0.08
PABPC1-203ENST00000517921 MIER1Q8N108 512 aa14.57□□□□□ -0.08
PABPC1-203ENST00000517921 PANK3Q9H999 370 aa14.57□□□□□ -0.08
PABPC1-203ENST00000517921 CD163L1Q9NR16 1453 aa14.57□□□□□ -0.08
PABPC1-203ENST00000517921 NRKQ7Z2Y5 1582 aa14.56□□□□□ -0.08
PABPC1-203ENST00000517921 ANKRD36BQ8N2N9 1353 aa14.55□□□□□ -0.08
PABPC1-203ENST00000517921 PER1O15534 1290 aaPredicted RBP14.54□□□□□ -0.08
PABPC1-203ENST00000517921 ANP32CO43423 234 aa14.54□□□□□ -0.08
PABPC1-203ENST00000517921 SLC12A5Q9H2X9 1139 aa14.54□□□□□ -0.08
PABPC1-203ENST00000517921 PRR36Q9H6K5 1346 aa14.54□□□□□ -0.08
PABPC1-203ENST00000517921 PPIP5K1Q6PFW1 1433 aa14.54□□□□□ -0.08
PABPC1-203ENST00000517921 LRRC7Q96NW7 1537 aa14.54□□□□□ -0.08
PABPC1-203ENST00000517921 ANKARQ7Z5J8 1434 aa14.53□□□□□ -0.08
PABPC1-203ENST00000517921 A0A1W2PP64 1363 aa14.53□□□□□ -0.08
PABPC1-203ENST00000517921 TMC1Q8TDI8 760 aa14.53□□□□□ -0.08
PABPC1-203ENST00000517921 NSD3Q9BZ95 1437 aa14.52□□□□□ -0.08
PABPC1-203ENST00000517921 NCOA3Q9Y6Q9 1424 aa14.52□□□□□ -0.08
PABPC1-203ENST00000517921 PROSER2Q86WR7 435 aaPredicted RBP14.52□□□□□ -0.09
PABPC1-203ENST00000517921 HSPA1LP34931 641 aa14.51□□□□□ -0.09
PABPC1-203ENST00000517921 NUDT16Q96DE0 195 aaKnown RBP14.51□□□□□ -0.09
PABPC1-203ENST00000517921 RBM33Q96EV2 1170 aaKnown RBP14.51□□□□□ -0.09
PABPC1-203ENST00000517921 CARD14Q9BXL6 1004 aa14.5□□□□□ -0.09
PABPC1-203ENST00000517921 PRKRIP1Q9H875 184 aaPredicted RBP14.5□□□□□ -0.09
PABPC1-203ENST00000517921 DCCP43146 1447 aa14.49□□□□□ -0.09
PABPC1-203ENST00000517921 CPSF1Q10570 1443 aaKnown RBP14.49□□□□□ -0.09
PABPC1-203ENST00000517921 TMEM94Q12767 1356 aa14.49□□□□□ -0.09
PABPC1-203ENST00000517921 NPC1L1Q9UHC9 1359 aa14.49□□□□□ -0.09
PABPC1-203ENST00000517921 KIF1AQ12756 1690 aa14.49□□□□□ -0.09
PABPC1-203ENST00000517921 CCDC61Q9Y6R9 512 aa14.49□□□□□ -0.09
PABPC1-203ENST00000517921 PARD3Q8TEW0 1356 aa14.48□□□□□ -0.09
PABPC1-203ENST00000517921 AMER1Q5JTC6 1135 aaPredicted RBP14.48□□□□□ -0.09
PABPC1-203ENST00000517921 CABP1Q9NZU7 370 aa14.48□□□□□ -0.09
PABPC1-203ENST00000517921 KTN1Q86UP2 1357 aaKnown RBP14.47□□□□□ -0.09
PABPC1-203ENST00000517921 KNSTRNQ9Y448 316 aa14.47□□□□□ -0.09
PABPC1-203ENST00000517921 NUTM2FA1L443 756 aa14.46□□□□□ -0.09
PABPC1-203ENST00000517921 TERF2IPQ9NYB0 399 aa14.46□□□□□ -0.09
PABPC1-203ENST00000517921 PLEKHG3A1L390 1219 aa14.45□□□□□ -0.1
PABPC1-203ENST00000517921 EDC4Q6P2E9 1401 aaKnown RBP14.45□□□□□ -0.1
PABPC1-203ENST00000517921 HDGFL2Q7Z4V5 671 aaPredicted RBP14.45□□□□□ -0.1
PABPC1-203ENST00000517921 C14orf37Q86TY3 774 aa14.45□□□□□ -0.1
PABPC1-203ENST00000517921 MARF1Q9Y4F3 1742 aaKnown RBP14.45□□□□□ -0.1
PABPC1-203ENST00000517921 USP54Q70EL1 1684 aa14.45□□□□□ -0.1
PABPC1-203ENST00000517921 MST1RQ04912 1400 aa14.44□□□□□ -0.1
PABPC1-203ENST00000517921 MAP2P11137 1827 aaKnown RBP14.44□□□□□ -0.1
PABPC1-203ENST00000517921 CC2D1BQ5T0F9 858 aaKnown RBP14.44□□□□□ -0.1
PABPC1-203ENST00000517921 POLR3AO14802 1390 aaPredicted RBP14.44□□□□□ -0.1
PABPC1-203ENST00000517921 TRPM3Q9HCF6 1732 aaPredicted RBP14.44□□□□□ -0.1
PABPC1-203ENST00000517921 PIK3C2AO00443 1686 aa14.43□□□□□ -0.1
PABPC1-203ENST00000517921 CNGB1Q14028 1251 aaPredicted RBP14.43□□□□□ -0.1
PABPC1-203ENST00000517921 RALBP1Q15311 655 aa14.43□□□□□ -0.1
PABPC1-203ENST00000517921 C19orf44Q9H6X5 657 aa14.43□□□□□ -0.1
PABPC1-203ENST00000517921 NSD2O96028 1365 aa14.43□□□□□ -0.1
PABPC1-203ENST00000517921 MSH6P52701 1360 aa14.43□□□□□ -0.1
PABPC1-203ENST00000517921 C1orf167Q5SNV9 1468 aa14.43□□□□□ -0.1
PABPC1-203ENST00000517921 CGNL1Q0VF96 1302 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms