RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 ATRNO75882 1429 aa13.78□□□□□ -0.2
LINCR-0001-201ENST00000517732 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.78□□□□□ -0.2
LINCR-0001-201ENST00000517732 CCDC125Q86Z20 511 aa13.77□□□□□ -0.21
LINCR-0001-201ENST00000517732 FNBP4Q8N3X1 1017 aaPredicted RBP13.77□□□□□ -0.21
LINCR-0001-201ENST00000517732 CDC42BPGQ6DT37 1551 aa13.76□□□□□ -0.21
LINCR-0001-201ENST00000517732 PRAG1Q86YV5 1406 aa13.76□□□□□ -0.21
LINCR-0001-201ENST00000517732 ROBO2Q9HCK4 1378 aa13.76□□□□□ -0.21
LINCR-0001-201ENST00000517732 NPHP3Q7Z494 1330 aa13.76□□□□□ -0.21
LINCR-0001-201ENST00000517732 MYOM2P54296 1465 aa13.74□□□□□ -0.21
LINCR-0001-201ENST00000517732 LRPPRCP42704 1394 aaKnown RBP13.74□□□□□ -0.21
LINCR-0001-201ENST00000517732 RPGRIP1LQ68CZ1 1315 aa13.74□□□□□ -0.21
LINCR-0001-201ENST00000517732 ESCO1Q5FWF5 840 aa13.73□□□□□ -0.21
LINCR-0001-201ENST00000517732 KIF1AQ12756 1690 aa13.72□□□□□ -0.21
LINCR-0001-201ENST00000517732 BRWD3Q6RI45 1802 aa13.71□□□□□ -0.21
LINCR-0001-201ENST00000517732 GJD4Q96KN9 370 aaPredicted RBP13.71□□□□□ -0.21
LINCR-0001-201ENST00000517732 BCL9LQ86UU0 1499 aa13.71□□□□□ -0.21
LINCR-0001-201ENST00000517732 PXDNQ92626 1479 aa13.71□□□□□ -0.21
LINCR-0001-201ENST00000517732 KNDC1Q76NI1 1749 aa13.7□□□□□ -0.22
LINCR-0001-201ENST00000517732 FMN2Q9NZ56 1722 aa13.69□□□□□ -0.22
LINCR-0001-201ENST00000517732 BLMP54132 1417 aaPredicted RBP13.68□□□□□ -0.22
LINCR-0001-201ENST00000517732 FOXO3O43524 673 aa13.68□□□□□ -0.22
LINCR-0001-201ENST00000517732 SF3B2Q13435 895 aaKnown RBP13.68□□□□□ -0.22
LINCR-0001-201ENST00000517732 USP32Q8NFA0 1604 aa13.68□□□□□ -0.22
LINCR-0001-201ENST00000517732 GLI3P10071 1580 aa13.67□□□□□ -0.22
LINCR-0001-201ENST00000517732 NAIPQ13075 1403 aa13.67□□□□□ -0.22
LINCR-0001-201ENST00000517732 XPCQ01831 940 aaPredicted RBP13.67□□□□□ -0.22
LINCR-0001-201ENST00000517732 IFT172Q9UG01 1749 aa13.67□□□□□ -0.22
LINCR-0001-201ENST00000517732 HAP1P54257 671 aaPredicted RBP13.66□□□□□ -0.22
LINCR-0001-201ENST00000517732 UNC5CLQ8IV45 518 aa13.66□□□□□ -0.22
LINCR-0001-201ENST00000517732 NWD2Q9ULI1 1742 aa13.66□□□□□ -0.22
LINCR-0001-201ENST00000517732 RALGAPBQ86X10 1494 aa13.66□□□□□ -0.22
LINCR-0001-201ENST00000517732 PLCH1Q4KWH8 1693 aa13.66□□□□□ -0.22
LINCR-0001-201ENST00000517732 RGPD8O14715 1765 aaPredicted RBP13.66□□□□□ -0.22
LINCR-0001-201ENST00000517732 CCDC144AA2RUR9 1427 aa13.65□□□□□ -0.22
LINCR-0001-201ENST00000517732 SLIT2O94813 1529 aa13.65□□□□□ -0.22
LINCR-0001-201ENST00000517732 SLC4A1APQ9BWU0 796 aaKnown RBP13.65□□□□□ -0.22
LINCR-0001-201ENST00000517732 RRBP1Q9P2E9 1410 aaKnown RBP13.64□□□□□ -0.23
LINCR-0001-201ENST00000517732 NUTM2FA1L443 756 aa13.64□□□□□ -0.23
LINCR-0001-201ENST00000517732 PPARGC1BQ86YN6 1023 aaKnown RBP13.64□□□□□ -0.23
LINCR-0001-201ENST00000517732 LRP5O75197 1615 aa13.64□□□□□ -0.23
LINCR-0001-201ENST00000517732 TECPR2O15040 1411 aa13.64□□□□□ -0.23
LINCR-0001-201ENST00000517732 STK26Q9P289 416 aa13.63□□□□□ -0.23
LINCR-0001-201ENST00000517732 SPATA31A3Q5VYP0 1347 aa13.63□□□□□ -0.23
LINCR-0001-201ENST00000517732 ABCA3Q99758 1704 aa13.62□□□□□ -0.23
LINCR-0001-201ENST00000517732 EP400Q96L91 3159 aa13.61□□□□□ -0.23
LINCR-0001-201ENST00000517732 CCDC9Q9Y3X0 531 aaKnown RBP13.61□□□□□ -0.23
LINCR-0001-201ENST00000517732 ABCC11Q96J66 1382 aa13.6□□□□□ -0.23
LINCR-0001-201ENST00000517732 ANKRD30BQ9BXX2 1392 aa13.6□□□□□ -0.23
LINCR-0001-201ENST00000517732 PSME1Q06323 249 aa13.6□□□□□ -0.23
LINCR-0001-201ENST00000517732 TNS3Q68CZ2 1445 aa13.6□□□□□ -0.23
LINCR-0001-201ENST00000517732 KRT28Q7Z3Y7 464 aa13.6□□□□□ -0.23
LINCR-0001-201ENST00000517732 WAPLQ7Z5K2 1190 aa13.6□□□□□ -0.23
LINCR-0001-201ENST00000517732 ADGRF5Q8IZF2 1346 aa13.6□□□□□ -0.23
LINCR-0001-201ENST00000517732 DEFB132Q7Z7B7 95 aa13.59□□□□□ -0.23
LINCR-0001-201ENST00000517732 SEPT12Q8IYM1 358 aa13.59□□□□□ -0.23
LINCR-0001-201ENST00000517732 A0A0G2JS52 829 aa13.58□□□□□ -0.24
LINCR-0001-201ENST00000517732 MYT1Q01538 1121 aa13.58□□□□□ -0.24
LINCR-0001-201ENST00000517732 VPS72Q15906 364 aa13.58□□□□□ -0.24
LINCR-0001-201ENST00000517732 RGPD1P0DJD0 1748 aa13.58□□□□□ -0.24
LINCR-0001-201ENST00000517732 YTHDC2Q9H6S0 1430 aaKnown RBP13.57□□□□□ -0.24
LINCR-0001-201ENST00000517732 BAG6P46379 1132 aa13.57□□□□□ -0.24
LINCR-0001-201ENST00000517732 RGL3Q3MIN7 710 aa13.57□□□□□ -0.24
LINCR-0001-201ENST00000517732 KRT27Q7Z3Y8 459 aa13.57□□□□□ -0.24
LINCR-0001-201ENST00000517732 ARHGEF10O15013 1369 aa13.57□□□□□ -0.24
LINCR-0001-201ENST00000517732 PLEKHH1Q9ULM0 1364 aa13.57□□□□□ -0.24
LINCR-0001-201ENST00000517732 TMEM132EQ6IEE7 984 aa13.56□□□□□ -0.24
LINCR-0001-201ENST00000517732 LMOD2Q6P5Q4 547 aa13.56□□□□□ -0.24
LINCR-0001-201ENST00000517732 PHF8Q9UPP1 1060 aa13.56□□□□□ -0.24
LINCR-0001-201ENST00000517732 PIK3C2GO75747 1445 aa13.56□□□□□ -0.24
LINCR-0001-201ENST00000517732 PLEKHG5O94827 1062 aa13.55□□□□□ -0.24
LINCR-0001-201ENST00000517732 NRAPQ86VF7 1730 aa13.55□□□□□ -0.24
LINCR-0001-201ENST00000517732 SBNO1A3KN83 1393 aa13.55□□□□□ -0.24
LINCR-0001-201ENST00000517732 SPATA31E1Q6ZUB1 1445 aa13.55□□□□□ -0.24
LINCR-0001-201ENST00000517732 NRXN1Q9ULB1 1477 aa13.55□□□□□ -0.24
LINCR-0001-201ENST00000517732 SRCAPQ6ZRS2 3230 aa13.54□□□□□ -0.24
LINCR-0001-201ENST00000517732 COL14A1Q05707 1796 aaKnown RBP13.53□□□□□ -0.24
LINCR-0001-201ENST00000517732 CABLES1Q8TDN4 633 aa13.53□□□□□ -0.24
LINCR-0001-201ENST00000517732 SIRT1Q96EB6 747 aa13.53□□□□□ -0.24
LINCR-0001-201ENST00000517732 DHX57Q6P158 1386 aaKnown RBP13.53□□□□□ -0.24
LINCR-0001-201ENST00000517732 ONECUT3O60422 494 aaPredicted RBP13.52□□□□□ -0.25
LINCR-0001-201ENST00000517732 PSDA5PKW4 1024 aaPredicted RBP13.51□□□□□ -0.25
LINCR-0001-201ENST00000517732 TRPM3Q9HCF6 1732 aaPredicted RBP13.5□□□□□ -0.25
LINCR-0001-201ENST00000517732 ADGRB2O60241 1585 aa13.5□□□□□ -0.25
LINCR-0001-201ENST00000517732 ANKARQ7Z5J8 1434 aa13.5□□□□□ -0.25
LINCR-0001-201ENST00000517732 ALS2Q96Q42 1657 aa13.5□□□□□ -0.25
LINCR-0001-201ENST00000517732 FAM98CQ17RN3 349 aaKnown RBP13.49□□□□□ -0.25
LINCR-0001-201ENST00000517732 TNS1Q9HBL0 1735 aaKnown RBP13.49□□□□□ -0.25
LINCR-0001-201ENST00000517732 EIF3AQ14152 1382 aaKnown RBP13.48□□□□□ -0.25
LINCR-0001-201ENST00000517732 GPRASP1Q5JY77 1395 aa13.48□□□□□ -0.25
LINCR-0001-201ENST00000517732 HRCP23327 699 aa13.48□□□□□ -0.25
LINCR-0001-201ENST00000517732 SAFB2Q14151 953 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINCR-0001-201ENST00000517732 C14orf93Q9H972 538 aaKnown RBP13.48□□□□□ -0.25
LINCR-0001-201ENST00000517732 BTG4Q9NY30 223 aa13.48□□□□□ -0.25
LINCR-0001-201ENST00000517732 POGKQ9P215 609 aa13.48□□□□□ -0.25
LINCR-0001-201ENST00000517732 DLC1Q96QB1 1528 aa13.48□□□□□ -0.25
LINCR-0001-201ENST00000517732 FAM83GA6ND36 823 aa13.47□□□□□ -0.25
LINCR-0001-201ENST00000517732 PMFBP1Q8TBY8 1022 aa13.47□□□□□ -0.25
LINCR-0001-201ENST00000517732 PRAM1Q96QH2 718 aa13.47□□□□□ -0.25
LINCR-0001-201ENST00000517732 MPHOSPH9Q99550 1183 aa13.47□□□□□ -0.25
LINCR-0001-201ENST00000517732 ITSN1Q15811 1721 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms