RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 VGFO15240 615 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC9-203ENST00000517667 CCDC125Q86Z20 511 aa17.48■□□□□ 0.39
TRAPPC9-203ENST00000517667 ORAI2Q96SN7 254 aa17.48■□□□□ 0.39
TRAPPC9-203ENST00000517667 CDC42BPGQ6DT37 1551 aa17.48■□□□□ 0.39
TRAPPC9-203ENST00000517667 MYOM2P54296 1465 aa17.47■□□□□ 0.39
TRAPPC9-203ENST00000517667 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.47■□□□□ 0.39
TRAPPC9-203ENST00000517667 NPHP3Q7Z494 1330 aa17.46■□□□□ 0.38
TRAPPC9-203ENST00000517667 PPLO60437 1756 aa17.45■□□□□ 0.38
TRAPPC9-203ENST00000517667 BCL9LQ86UU0 1499 aa17.44■□□□□ 0.38
TRAPPC9-203ENST00000517667 PXDNQ92626 1479 aa17.44■□□□□ 0.38
TRAPPC9-203ENST00000517667 RPGRIP1LQ68CZ1 1315 aa17.43■□□□□ 0.38
TRAPPC9-203ENST00000517667 LRPPRCP42704 1394 aaKnown RBP17.41■□□□□ 0.38
TRAPPC9-203ENST00000517667 ESCO1Q5FWF5 840 aa17.4■□□□□ 0.38
TRAPPC9-203ENST00000517667 GJD4Q96KN9 370 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC9-203ENST00000517667 KIF1AQ12756 1690 aa17.38■□□□□ 0.37
TRAPPC9-203ENST00000517667 BLMP54132 1417 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC9-203ENST00000517667 NAIPQ13075 1403 aa17.37■□□□□ 0.37
TRAPPC9-203ENST00000517667 GLI3P10071 1580 aa17.36■□□□□ 0.37
TRAPPC9-203ENST00000517667 KNDC1Q76NI1 1749 aa17.35■□□□□ 0.37
TRAPPC9-203ENST00000517667 FOXO3O43524 673 aa17.35■□□□□ 0.37
TRAPPC9-203ENST00000517667 TECPR2O15040 1411 aa17.35■□□□□ 0.37
TRAPPC9-203ENST00000517667 SLIT2O94813 1529 aa17.35■□□□□ 0.37
TRAPPC9-203ENST00000517667 USP32Q8NFA0 1604 aa17.35■□□□□ 0.37
TRAPPC9-203ENST00000517667 BRWD3Q6RI45 1802 aa17.34■□□□□ 0.37
TRAPPC9-203ENST00000517667 RALGAPBQ86X10 1494 aa17.34■□□□□ 0.37
TRAPPC9-203ENST00000517667 FMN2Q9NZ56 1722 aa17.34■□□□□ 0.37
TRAPPC9-203ENST00000517667 UNC5CLQ8IV45 518 aa17.33■□□□□ 0.36
TRAPPC9-203ENST00000517667 CCDC144AA2RUR9 1427 aa17.32■□□□□ 0.36
TRAPPC9-203ENST00000517667 XPCQ01831 940 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC9-203ENST00000517667 IFT172Q9UG01 1749 aa17.32■□□□□ 0.36
TRAPPC9-203ENST00000517667 LRP5O75197 1615 aa17.32■□□□□ 0.36
TRAPPC9-203ENST00000517667 RRBP1Q9P2E9 1410 aaKnown RBP17.31■□□□□ 0.36
TRAPPC9-203ENST00000517667 NWD2Q9ULI1 1742 aa17.31■□□□□ 0.36
TRAPPC9-203ENST00000517667 PLCH1Q4KWH8 1693 aa17.3■□□□□ 0.36
TRAPPC9-203ENST00000517667 SPATA31A3Q5VYP0 1347 aa17.29■□□□□ 0.36
TRAPPC9-203ENST00000517667 SF3B2Q13435 895 aaKnown RBP17.29■□□□□ 0.36
TRAPPC9-203ENST00000517667 SLC4A1APQ9BWU0 796 aaKnown RBP17.29■□□□□ 0.36
TRAPPC9-203ENST00000517667 ABCC11Q96J66 1382 aa17.28■□□□□ 0.36
TRAPPC9-203ENST00000517667 ABCA3Q99758 1704 aa17.27■□□□□ 0.36
TRAPPC9-203ENST00000517667 ANKRD30BQ9BXX2 1392 aa17.27■□□□□ 0.35
TRAPPC9-203ENST00000517667 NUTM2FA1L443 756 aa17.26■□□□□ 0.35
TRAPPC9-203ENST00000517667 TNS3Q68CZ2 1445 aa17.26■□□□□ 0.35
TRAPPC9-203ENST00000517667 HAP1P54257 671 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC9-203ENST00000517667 WAPLQ7Z5K2 1190 aa17.25■□□□□ 0.35
TRAPPC9-203ENST00000517667 PPARGC1BQ86YN6 1023 aaKnown RBP17.25■□□□□ 0.35
TRAPPC9-203ENST00000517667 STK26Q9P289 416 aa17.25■□□□□ 0.35
TRAPPC9-203ENST00000517667 RGPD8O14715 1765 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC9-203ENST00000517667 ADGRF5Q8IZF2 1346 aa17.24■□□□□ 0.35
TRAPPC9-203ENST00000517667 VPS72Q15906 364 aa17.24■□□□□ 0.35
TRAPPC9-203ENST00000517667 SEPT12Q8IYM1 358 aa17.24■□□□□ 0.35
TRAPPC9-203ENST00000517667 PIK3C2GO75747 1445 aa17.23■□□□□ 0.35
TRAPPC9-203ENST00000517667 KRT28Q7Z3Y7 464 aa17.23■□□□□ 0.35
TRAPPC9-203ENST00000517667 DEFB132Q7Z7B7 95 aa17.23■□□□□ 0.35
TRAPPC9-203ENST00000517667 PLEKHH1Q9ULM0 1364 aa17.23■□□□□ 0.35
TRAPPC9-203ENST00000517667 SPATA31E1Q6ZUB1 1445 aa17.22■□□□□ 0.35
TRAPPC9-203ENST00000517667 YTHDC2Q9H6S0 1430 aaKnown RBP17.22■□□□□ 0.35
TRAPPC9-203ENST00000517667 PSME1Q06323 249 aa17.22■□□□□ 0.35
TRAPPC9-203ENST00000517667 ARHGEF10O15013 1369 aa17.21■□□□□ 0.35
TRAPPC9-203ENST00000517667 ONECUT3O60422 494 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC9-203ENST00000517667 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
TRAPPC9-203ENST00000517667 KRT27Q7Z3Y8 459 aa17.2■□□□□ 0.34
TRAPPC9-203ENST00000517667 NRXN1Q9ULB1 1477 aa17.19■□□□□ 0.34
TRAPPC9-203ENST00000517667 RGPD1P0DJD0 1748 aa17.19■□□□□ 0.34
TRAPPC9-203ENST00000517667 NRAPQ86VF7 1730 aa17.19■□□□□ 0.34
TRAPPC9-203ENST00000517667 TMEM132EQ6IEE7 984 aa17.19■□□□□ 0.34
TRAPPC9-203ENST00000517667 SIRT1Q96EB6 747 aa17.19■□□□□ 0.34
TRAPPC9-203ENST00000517667 PHF8Q9UPP1 1060 aa17.19■□□□□ 0.34
TRAPPC9-203ENST00000517667 CCDC9Q9Y3X0 531 aaKnown RBP17.19■□□□□ 0.34
TRAPPC9-203ENST00000517667 RGL3Q3MIN7 710 aa17.18■□□□□ 0.34
TRAPPC9-203ENST00000517667 BAG6P46379 1132 aa17.17■□□□□ 0.34
TRAPPC9-203ENST00000517667 CABLES1Q8TDN4 633 aa17.16■□□□□ 0.34
TRAPPC9-203ENST00000517667 COL14A1Q05707 1796 aaKnown RBP17.15■□□□□ 0.34
TRAPPC9-203ENST00000517667 ANKARQ7Z5J8 1434 aa17.14■□□□□ 0.33
TRAPPC9-203ENST00000517667 A0A0G2JS52 829 aa17.14■□□□□ 0.33
TRAPPC9-203ENST00000517667 MYT1Q01538 1121 aa17.14■□□□□ 0.33
TRAPPC9-203ENST00000517667 LMOD2Q6P5Q4 547 aa17.14■□□□□ 0.33
TRAPPC9-203ENST00000517667 ADGRB2O60241 1585 aa17.14■□□□□ 0.33
TRAPPC9-203ENST00000517667 TRPM3Q9HCF6 1732 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC9-203ENST00000517667 DHX57Q6P158 1386 aaKnown RBP17.13■□□□□ 0.33
TRAPPC9-203ENST00000517667 HRCP23327 699 aa17.12■□□□□ 0.33
TRAPPC9-203ENST00000517667 ALS2Q96Q42 1657 aa17.12■□□□□ 0.33
TRAPPC9-203ENST00000517667 DLC1Q96QB1 1528 aa17.11■□□□□ 0.33
TRAPPC9-203ENST00000517667 PSDA5PKW4 1024 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC9-203ENST00000517667 C14orf93Q9H972 538 aaKnown RBP17.11■□□□□ 0.33
TRAPPC9-203ENST00000517667 TNS1Q9HBL0 1735 aaKnown RBP17.1■□□□□ 0.33
TRAPPC9-203ENST00000517667 FAM83GA6ND36 823 aa17.1■□□□□ 0.33
TRAPPC9-203ENST00000517667 PLEKHG5O94827 1062 aa17.1■□□□□ 0.33
TRAPPC9-203ENST00000517667 FAM98CQ17RN3 349 aaKnown RBP17.1■□□□□ 0.33
TRAPPC9-203ENST00000517667 BTG4Q9NY30 223 aa17.09■□□□□ 0.33
TRAPPC9-203ENST00000517667 DISP2A7MBM2 1401 aa17.09■□□□□ 0.33
TRAPPC9-203ENST00000517667 THSD7AQ9UPZ6 1657 aa17.09■□□□□ 0.33
TRAPPC9-203ENST00000517667 CRYBG1Q9Y4K1 1723 aa17.09■□□□□ 0.33
TRAPPC9-203ENST00000517667 EIF3AQ14152 1382 aaKnown RBP17.08■□□□□ 0.32
TRAPPC9-203ENST00000517667 PRAM1Q96QH2 718 aa17.08■□□□□ 0.32
TRAPPC9-203ENST00000517667 MPHOSPH9Q99550 1183 aa17.08■□□□□ 0.32
TRAPPC9-203ENST00000517667 GPRASP1Q5JY77 1395 aa17.07■□□□□ 0.32
TRAPPC9-203ENST00000517667 PMFBP1Q8TBY8 1022 aa17.06■□□□□ 0.32
TRAPPC9-203ENST00000517667 POGKQ9P215 609 aa17.06■□□□□ 0.32
TRAPPC9-203ENST00000517667 ACIN1Q9UKV3 1341 aaKnown RBP17.05■□□□□ 0.32
TRAPPC9-203ENST00000517667 EN1Q05925 392 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms