RNA–Protein interactions for RNA: ENST00000517325.5

CHMP7-203, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 2,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-203ENST00000517325 GOLGA2Q08379 1002 aa22.02■■□□□ 1.12
CHMP7-203ENST00000517325 EVC2Q86UK5 1308 aa22.01■■□□□ 1.11
CHMP7-203ENST00000517325 POLR3AO14802 1390 aaPredicted RBP22.01■■□□□ 1.11
CHMP7-203ENST00000517325 APAF1O14727 1248 aa22.01■■□□□ 1.11
CHMP7-203ENST00000517325 MORC1Q86VD1 984 aa22■■□□□ 1.11
CHMP7-203ENST00000517325 NOP58Q9Y2X3 529 aaKnown RBP22■■□□□ 1.11
CHMP7-203ENST00000517325 USP32Q8NFA0 1604 aa22■■□□□ 1.11
CHMP7-203ENST00000517325 SAFB2Q14151 953 aaKnown RBP eCLIP21.99■■□□□ 1.11
CHMP7-203ENST00000517325 PUS7Q96PZ0 661 aaKnown RBP21.99■■□□□ 1.11
CHMP7-203ENST00000517325 TNNT2P45379 298 aaPredicted RBP21.98■■□□□ 1.11
CHMP7-203ENST00000517325 STK26Q9P289 416 aa21.98■■□□□ 1.11
CHMP7-203ENST00000517325 SLFN5Q08AF3 891 aa21.97■■□□□ 1.11
CHMP7-203ENST00000517325 CABP2Q9NPB3 220 aa21.97■■□□□ 1.11
CHMP7-203ENST00000517325 REREQ9P2R6 1566 aa21.96■■□□□ 1.11
CHMP7-203ENST00000517325 ANKRD36BQ8N2N9 1353 aa21.96■■□□□ 1.11
CHMP7-203ENST00000517325 CRBNQ96SW2 442 aa21.96■■□□□ 1.11
CHMP7-203ENST00000517325 SHPRHQ149N8 1683 aa21.96■■□□□ 1.11
CHMP7-203ENST00000517325 CGNL1Q0VF96 1302 aa21.96■■□□□ 1.11
CHMP7-203ENST00000517325 SPINK5Q9NQ38 1064 aaPredicted RBP21.95■■□□□ 1.11
CHMP7-203ENST00000517325 TRMT2AQ8IZ69 625 aaKnown RBP21.95■■□□□ 1.1
CHMP7-203ENST00000517325 AGLP35573 1532 aa21.95■■□□□ 1.1
CHMP7-203ENST00000517325 C20orf194Q5TEA3 1177 aa21.94■■□□□ 1.1
CHMP7-203ENST00000517325 PTPRMP28827 1452 aa21.94■■□□□ 1.1
CHMP7-203ENST00000517325 YTHDC2Q9H6S0 1430 aaKnown RBP21.91■■□□□ 1.1
CHMP7-203ENST00000517325 DMRT2Q9Y5R5 561 aa21.91■■□□□ 1.1
CHMP7-203ENST00000517325 CLTCQ00610 1675 aaKnown RBP21.91■■□□□ 1.1
CHMP7-203ENST00000517325 PRKCSHP14314 528 aaPredicted RBP21.89■■□□□ 1.09
CHMP7-203ENST00000517325 MTHFSP49914 203 aa21.89■■□□□ 1.09
CHMP7-203ENST00000517325 PRAM1Q96QH2 718 aa21.89■■□□□ 1.09
CHMP7-203ENST00000517325 ALKQ9UM73 1620 aa21.89■■□□□ 1.09
CHMP7-203ENST00000517325 SRPK2P78362 688 aaKnown RBP21.89■■□□□ 1.09
CHMP7-203ENST00000517325 STAG3Q9UJ98 1225 aa21.89■■□□□ 1.09
CHMP7-203ENST00000517325 PPP6R1Q9UPN7 881 aa21.88■■□□□ 1.09
CHMP7-203ENST00000517325 A0A1W2PP64 1363 aa21.88■■□□□ 1.09
CHMP7-203ENST00000517325 NSD2O96028 1365 aa21.88■■□□□ 1.09
CHMP7-203ENST00000517325 NKTRP30414 1462 aaKnown RBP21.88■■□□□ 1.09
CHMP7-203ENST00000517325 MINK1Q8N4C8 1332 aaPredicted RBP21.88■■□□□ 1.09
CHMP7-203ENST00000517325 NGEFQ8N5V2 710 aa21.88■■□□□ 1.09
CHMP7-203ENST00000517325 E9PSI1 815 aa21.87■■□□□ 1.09
CHMP7-203ENST00000517325 SPATA31D1Q6ZQQ2 1576 aa21.86■■□□□ 1.09
CHMP7-203ENST00000517325 NINLQ9Y2I6 1382 aa21.86■■□□□ 1.09
CHMP7-203ENST00000517325 MLECQ14165 292 aa21.86■■□□□ 1.09
CHMP7-203ENST00000517325 POGKQ9P215 609 aa21.85■■□□□ 1.09
CHMP7-203ENST00000517325 A2ML1A8K2U0 1454 aa21.85■■□□□ 1.09
CHMP7-203ENST00000517325 WWC1Q8IX03 1113 aa21.85■■□□□ 1.09
CHMP7-203ENST00000517325 ABCC11Q96J66 1382 aa21.84■■□□□ 1.09
CHMP7-203ENST00000517325 IQSEC2Q5JU85 1478 aa21.84■■□□□ 1.09
CHMP7-203ENST00000517325 ATAD2Q6PL18 1390 aa21.83■■□□□ 1.09
CHMP7-203ENST00000517325 RUNDC1Q96C34 613 aa21.83■■□□□ 1.08
CHMP7-203ENST00000517325 ANO8Q9HCE9 1232 aaPredicted RBP21.83■■□□□ 1.08
CHMP7-203ENST00000517325 CFAP53Q96M91 514 aa21.82■■□□□ 1.08
CHMP7-203ENST00000517325 ARHGEF40Q8TER5 1519 aa21.82■■□□□ 1.08
CHMP7-203ENST00000517325 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.81■■□□□ 1.08
CHMP7-203ENST00000517325 CD163L1Q9NR16 1453 aa21.81■■□□□ 1.08
CHMP7-203ENST00000517325 TCERG1O14776 1098 aaKnown RBP21.81■■□□□ 1.08
CHMP7-203ENST00000517325 RRP7AQ9Y3A4 280 aaKnown RBP21.81■■□□□ 1.08
CHMP7-203ENST00000517325 NEUROD2Q15784 382 aa21.8■■□□□ 1.08
CHMP7-203ENST00000517325 TCP11L2Q8N4U5 519 aa21.8■■□□□ 1.08
CHMP7-203ENST00000517325 RIMS2Q9UQ26 1411 aa21.79■■□□□ 1.08
CHMP7-203ENST00000517325 BCAR3O75815 825 aa21.79■■□□□ 1.08
CHMP7-203ENST00000517325 KIF13AQ9H1H9 1805 aa21.79■■□□□ 1.08
CHMP7-203ENST00000517325 GGNBP2Q9H3C7 697 aa21.79■■□□□ 1.08
CHMP7-203ENST00000517325 IPO9Q96P70 1041 aaKnown RBP21.77■■□□□ 1.08
CHMP7-203ENST00000517325 PHF23Q9BUL5 403 aaPredicted RBP21.77■■□□□ 1.08
CHMP7-203ENST00000517325 CDK19Q9BWU1 502 aa21.77■■□□□ 1.08
CHMP7-203ENST00000517325 TERF2IPQ9NYB0 399 aa21.77■■□□□ 1.08
CHMP7-203ENST00000517325 SETD1AO15047 1707 aaKnown RBP21.76■■□□□ 1.07
CHMP7-203ENST00000517325 KDM2BQ8NHM5 1336 aa21.76■■□□□ 1.07
CHMP7-203ENST00000517325 NLRP1Q9C000 1473 aa21.76■■□□□ 1.07
CHMP7-203ENST00000517325 SKAP1Q86WV1 359 aa21.76■■□□□ 1.07
CHMP7-203ENST00000517325 ANP32AP39687 249 aaKnown RBP21.76■■□□□ 1.07
CHMP7-203ENST00000517325 FYB1O15117 783 aa21.75■■□□□ 1.07
CHMP7-203ENST00000517325 U2AF1L5P0DN76 240 aaPredicted RBP21.74■■□□□ 1.07
CHMP7-203ENST00000517325 U2AF1Q01081 240 aaKnown RBP eCLIP21.74■■□□□ 1.07
CHMP7-203ENST00000517325 DLC1Q96QB1 1528 aa21.74■■□□□ 1.07
CHMP7-203ENST00000517325 WAPLQ7Z5K2 1190 aa21.74■■□□□ 1.07
CHMP7-203ENST00000517325 ZBTB47Q9UFB7 747 aaPredicted RBP21.74■■□□□ 1.07
CHMP7-203ENST00000517325 ANKRD26Q9UPS8 1709 aa21.73■■□□□ 1.07
CHMP7-203ENST00000517325 MS4A1P11836 297 aa21.73■■□□□ 1.07
CHMP7-203ENST00000517325 CABP1Q9NZU7 370 aa21.73■■□□□ 1.07
CHMP7-203ENST00000517325 MED14O60244 1454 aa21.72■■□□□ 1.07
CHMP7-203ENST00000517325 RTL5Q5HYW3 569 aaPredicted RBP21.72■■□□□ 1.07
CHMP7-203ENST00000517325 IL27Q8NEV9 243 aa21.72■■□□□ 1.07
CHMP7-203ENST00000517325 ZMYM3Q14202 1370 aa21.71■■□□□ 1.07
CHMP7-203ENST00000517325 COL3A1P02461 1466 aaPredicted RBP21.71■■□□□ 1.07
CHMP7-203ENST00000517325 NRXN3Q9Y4C0 1643 aa21.71■■□□□ 1.07
CHMP7-203ENST00000517325 PDE4AP27815 886 aa21.71■■□□□ 1.07
CHMP7-203ENST00000517325 CCDC27Q2M243 656 aa21.71■■□□□ 1.07
CHMP7-203ENST00000517325 HDGFL2Q7Z4V5 671 aaPredicted RBP21.71■■□□□ 1.07
CHMP7-203ENST00000517325 WDR63Q8IWG1 891 aa21.7■■□□□ 1.06
CHMP7-203ENST00000517325 RTN4Q9NQC3 1192 aaKnown RBP21.7■■□□□ 1.06
CHMP7-203ENST00000517325 ADGRB2O60241 1585 aa21.7■■□□□ 1.06
CHMP7-203ENST00000517325 CENPQQ7L2Z9 268 aaPredicted RBP21.69■■□□□ 1.06
CHMP7-203ENST00000517325 NPM2Q86SE8 214 aaKnown RBP21.68■■□□□ 1.06
CHMP7-203ENST00000517325 BACH2Q9BYV9 841 aa21.68■■□□□ 1.06
CHMP7-203ENST00000517325 ESF1Q9H501 851 aaKnown RBP21.68■■□□□ 1.06
CHMP7-203ENST00000517325 METP08581 1390 aa21.66■■□□□ 1.06
CHMP7-203ENST00000517325 U2SURPO15042 1029 aaKnown RBP21.66■■□□□ 1.06
CHMP7-203ENST00000517325 KIF20BQ96Q89 1820 aa21.65■■□□□ 1.06
CHMP7-203ENST00000517325 NCBP3Q53F19 620 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms