RNA–Protein interactions for RNA: ENST00000516257.1

RNU2-53P-201, Transcript of RNA, U2 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU2-53P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-53P-201ENST00000516257 GCGRP47871 477 aa7.01□□□□□ -1.29
RNU2-53P-201ENST00000516257 MSS51Q4VC12 460 aa7.01□□□□□ -1.29
RNU2-53P-201ENST00000516257 RBM26Q5T8P6 1007 aaKnown RBP7.01□□□□□ -1.29
RNU2-53P-201ENST00000516257 GPR37O15354 613 aa7□□□□□ -1.29
RNU2-53P-201ENST00000516257 TRIM32Q13049 653 aa7□□□□□ -1.29
RNU2-53P-201ENST00000516257 SNIP1Q8TAD8 396 aaKnown RBP7□□□□□ -1.29
RNU2-53P-201ENST00000516257 MRGPRX2Q96LB1 330 aa7□□□□□ -1.29
RNU2-53P-201ENST00000516257 TRIM47Q96LD4 638 aa7□□□□□ -1.29
RNU2-53P-201ENST00000516257 PHOX2BQ99453 314 aa7□□□□□ -1.29
RNU2-53P-201ENST00000516257 SALL2Q9Y467 1007 aaPredicted RBP7□□□□□ -1.29
RNU2-53P-201ENST00000516257 GNPATO15228 680 aa6.99□□□□□ -1.29
RNU2-53P-201ENST00000516257 HPS1Q92902 700 aa6.99□□□□□ -1.29
RNU2-53P-201ENST00000516257 AMER1Q5JTC6 1135 aaPredicted RBP6.98□□□□□ -1.29
RNU2-53P-201ENST00000516257 RTN4Q9NQC3 1192 aaKnown RBP6.98□□□□□ -1.29
RNU2-53P-201ENST00000516257 MMP16P51512 607 aa6.96□□□□□ -1.3
RNU2-53P-201ENST00000516257 P3H3Q8IVL6 736 aa6.96□□□□□ -1.3
RNU2-53P-201ENST00000516257 SULF1Q8IWU6 871 aa6.96□□□□□ -1.3
RNU2-53P-201ENST00000516257 SENP2Q9HC62 589 aa6.96□□□□□ -1.3
RNU2-53P-201ENST00000516257 TESPA1A2RU30 521 aaPredicted RBP6.94□□□□□ -1.3
RNU2-53P-201ENST00000516257 SKOR1P84550 965 aa6.94□□□□□ -1.3
RNU2-53P-201ENST00000516257 DXOO77932 396 aaKnown RBP6.92□□□□□ -1.3
RNU2-53P-201ENST00000516257 GRIPAP1Q4V328 841 aa6.92□□□□□ -1.3
RNU2-53P-201ENST00000516257 RC3H1Q5TC82 1133 aaKnown RBP6.92□□□□□ -1.3
RNU2-53P-201ENST00000516257 CCDC24Q8N4L8 307 aa6.92□□□□□ -1.3
RNU2-53P-201ENST00000516257 HLA-CQ95604 372 aa6.92□□□□□ -1.3
RNU2-53P-201ENST00000516257 KIFC2Q96AC6 838 aa6.92□□□□□ -1.3
RNU2-53P-201ENST00000516257 REPIN1Q9BWE0 567 aaKnown RBP6.92□□□□□ -1.3
RNU2-53P-201ENST00000516257 LORP23490 312 aaPredicted RBP6.91□□□□□ -1.3
RNU2-53P-201ENST00000516257 Q3C1V9 767 aa6.91□□□□□ -1.3
RNU2-53P-201ENST00000516257 USB1Q9BQ65 265 aaKnown RBP6.91□□□□□ -1.3
RNU2-53P-201ENST00000516257 BMP1P13497 986 aa6.9□□□□□ -1.3
RNU2-53P-201ENST00000516257 CD46P15529 392 aa6.9□□□□□ -1.3
RNU2-53P-201ENST00000516257 GMPRP36959 345 aa6.9□□□□□ -1.3
RNU2-53P-201ENST00000516257 ALDH1A1P00352 501 aa6.88□□□□□ -1.31
RNU2-53P-201ENST00000516257 VEGFBP49765 207 aa6.88□□□□□ -1.31
RNU2-53P-201ENST00000516257 WNT7BP56706 349 aa6.88□□□□□ -1.31
RNU2-53P-201ENST00000516257 TRIM46Q7Z4K8 759 aa6.88□□□□□ -1.31
RNU2-53P-201ENST00000516257 SLC16A10Q8TF71 515 aa6.88□□□□□ -1.31
RNU2-53P-201ENST00000516257 NXF1Q9UBU9 619 aaKnown RBP6.88□□□□□ -1.31
RNU2-53P-201ENST00000516257 SMYD5Q6GMV2 418 aa6.87□□□□□ -1.31
RNU2-53P-201ENST00000516257 KDM4AO75164 1064 aa6.86□□□□□ -1.31
RNU2-53P-201ENST00000516257 GUCA2AQ02747 115 aa6.86□□□□□ -1.31
RNU2-53P-201ENST00000516257 FAM181BA6NEQ2 426 aa6.85□□□□□ -1.31
RNU2-53P-201ENST00000516257 ZSCAN1Q8NBB4 408 aa6.85□□□□□ -1.31
RNU2-53P-201ENST00000516257 ERBB4Q15303 1308 aa6.84□□□□□ -1.31
RNU2-53P-201ENST00000516257 LOC100996750A0A140TA64 210 aa6.84□□□□□ -1.31
RNU2-53P-201ENST00000516257 SIAH2O43255 324 aa6.84□□□□□ -1.31
RNU2-53P-201ENST00000516257 PTCRAQ6ISU1 281 aaPredicted RBP6.84□□□□□ -1.31
RNU2-53P-201ENST00000516257 GPIHBP1Q8IV16 184 aa6.84□□□□□ -1.31
RNU2-53P-201ENST00000516257 SYMPKQ92797 1274 aaKnown RBP6.84□□□□□ -1.31
RNU2-53P-201ENST00000516257 KRTAP4-6Q9BYQ5 205 aa6.84□□□□□ -1.31
RNU2-53P-201ENST00000516257 H3BM21 787 aa6.83□□□□□ -1.32
RNU2-53P-201ENST00000516257 CAPN5O15484 640 aaPredicted RBP6.83□□□□□ -1.32
RNU2-53P-201ENST00000516257 HOXA2O43364 376 aa6.83□□□□□ -1.32
RNU2-53P-201ENST00000516257 JUNDP17535 347 aa6.83□□□□□ -1.32
RNU2-53P-201ENST00000516257 EHBP1Q8NDI1 1231 aa6.83□□□□□ -1.32
RNU2-53P-201ENST00000516257 IRF7Q92985 503 aa6.83□□□□□ -1.32
RNU2-53P-201ENST00000516257 NPAS3Q8IXF0 933 aa6.81□□□□□ -1.32
RNU2-53P-201ENST00000516257 WASF2Q9Y6W5 498 aa6.81□□□□□ -1.32
RNU2-53P-201ENST00000516257 USP46P62068 366 aa6.8□□□□□ -1.32
RNU2-53P-201ENST00000516257 MDM2Q00987 491 aaPredicted RBP6.8□□□□□ -1.32
RNU2-53P-201ENST00000516257 NUDT12Q9BQG2 462 aa6.8□□□□□ -1.32
RNU2-53P-201ENST00000516257 ZFP42Q96MM3 310 aa6.79□□□□□ -1.32
RNU2-53P-201ENST00000516257 TLL2Q9Y6L7 1015 aa6.79□□□□□ -1.32
RNU2-53P-201ENST00000516257 SH3BP2P78314 561 aa6.78□□□□□ -1.32
RNU2-53P-201ENST00000516257 MAP2K5Q13163 448 aa6.78□□□□□ -1.32
RNU2-53P-201ENST00000516257 LINC01559Q495D7 138 aa6.77□□□□□ -1.33
RNU2-53P-201ENST00000516257 RETREG3Q86VR2 466 aa6.77□□□□□ -1.33
RNU2-53P-201ENST00000516257 SOBPA7XYQ1 873 aa6.75□□□□□ -1.33
RNU2-53P-201ENST00000516257 IRF6O14896 467 aa6.74□□□□□ -1.33
RNU2-53P-201ENST00000516257 CCNYL3P0C7X3 344 aa6.74□□□□□ -1.33
RNU2-53P-201ENST00000516257 PCDHGC3Q9UN70 934 aa6.74□□□□□ -1.33
RNU2-53P-201ENST00000516257 MS4A1P11836 297 aa6.73□□□□□ -1.33
RNU2-53P-201ENST00000516257 NNTQ13423 1086 aa6.73□□□□□ -1.33
RNU2-53P-201ENST00000516257 MRPL14Q6P1L8 145 aaKnown RBP6.73□□□□□ -1.33
RNU2-53P-201ENST00000516257 PURBQ96QR8 312 aaKnown RBP6.73□□□□□ -1.33
RNU2-53P-201ENST00000516257 UNC93B1Q9H1C4 597 aa6.73□□□□□ -1.33
RNU2-53P-201ENST00000516257 FAM217BQ9NTX9 383 aaPredicted RBP6.73□□□□□ -1.33
RNU2-53P-201ENST00000516257 FDX1P10109 184 aa6.72□□□□□ -1.33
RNU2-53P-201ENST00000516257 TIMP2P16035 220 aa6.72□□□□□ -1.33
RNU2-53P-201ENST00000516257 BAP1Q92560 729 aa6.72□□□□□ -1.33
RNU2-53P-201ENST00000516257 CCDC102AQ96A19 550 aa6.72□□□□□ -1.33
RNU2-53P-201ENST00000516257 C6orf229H3BNL8 230 aa6.71□□□□□ -1.34
RNU2-53P-201ENST00000516257 VSIG8P0DPA2 414 aa6.71□□□□□ -1.34
RNU2-53P-201ENST00000516257 SUZ12Q15022 739 aaKnown RBP6.71□□□□□ -1.34
RNU2-53P-201ENST00000516257 NUTM1Q86Y26 1132 aa6.71□□□□□ -1.34
RNU2-53P-201ENST00000516257 GPCPD1Q9NPB8 672 aa6.71□□□□□ -1.34
RNU2-53P-201ENST00000516257 WDR4P57081 412 aaKnown RBP6.7□□□□□ -1.34
RNU2-53P-201ENST00000516257 PTPRNQ16849 979 aa6.7□□□□□ -1.34
RNU2-53P-201ENST00000516257 ZNF511Q8NB15 262 aa6.7□□□□□ -1.34
RNU2-53P-201ENST00000516257 ADH1CP00326 375 aa6.69□□□□□ -1.34
RNU2-53P-201ENST00000516257 SCARF1Q14162 830 aa6.69□□□□□ -1.34
RNU2-53P-201ENST00000516257 EVA1BQ9NVM1 165 aa6.69□□□□□ -1.34
RNU2-53P-201ENST00000516257 MINK1Q8N4C8 1332 aaPredicted RBP6.69□□□□□ -1.34
RNU2-53P-201ENST00000516257 VARSP26640 1264 aaKnown RBP6.68□□□□□ -1.34
RNU2-53P-201ENST00000516257 CLCN1P35523 988 aa6.68□□□□□ -1.34
RNU2-53P-201ENST00000516257 GSK3AP49840 483 aa6.68□□□□□ -1.34
RNU2-53P-201ENST00000516257 KCNH2Q12809 1159 aa6.68□□□□□ -1.34
RNU2-53P-201ENST00000516257 MPNDQ8N594 471 aa6.68□□□□□ -1.34
RNU2-53P-201ENST00000516257 KLF16Q9BXK1 252 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms