RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 HSP90AA2PQ14568 343 aaPredicted RBP12.68□□□□□ -0.38
SMG7-215ENST00000515829 FAM43AQ8N2R8 423 aa12.68□□□□□ -0.38
SMG7-215ENST00000515829 TBC1D2Q9BYX2 928 aa12.68□□□□□ -0.38
SMG7-215ENST00000515829 SEC24BO95487 1268 aa12.68□□□□□ -0.38
SMG7-215ENST00000515829 GCC2Q8IWJ2 1684 aa12.68□□□□□ -0.38
SMG7-215ENST00000515829 MCM4P33991 863 aa12.67□□□□□ -0.38
SMG7-215ENST00000515829 ATF7IPQ6VMQ6 1270 aa12.67□□□□□ -0.38
SMG7-215ENST00000515829 CDK11BP21127 795 aaKnown RBP12.67□□□□□ -0.38
SMG7-215ENST00000515829 ZRSR1Q15695 479 aaKnown RBP12.67□□□□□ -0.38
SMG7-215ENST00000515829 PCDHB15Q9Y5E8 787 aa12.67□□□□□ -0.38
SMG7-215ENST00000515829 PRKAR2BP31323 418 aa12.67□□□□□ -0.38
SMG7-215ENST00000515829 ST18O60284 1047 aa12.66□□□□□ -0.38
SMG7-215ENST00000515829 UHRF1BP1Q6BDS2 1440 aa12.66□□□□□ -0.38
SMG7-215ENST00000515829 KCNJ4P48050 445 aa12.66□□□□□ -0.38
SMG7-215ENST00000515829 MRE11P49959 708 aa12.66□□□□□ -0.38
SMG7-215ENST00000515829 SKOR2Q2VWA4 1001 aaPredicted RBP12.66□□□□□ -0.38
SMG7-215ENST00000515829 DENND4BO75064 1496 aaPredicted RBP12.66□□□□□ -0.38
SMG7-215ENST00000515829 KIAA0556O60303 1618 aa12.66□□□□□ -0.38
SMG7-215ENST00000515829 FAM135AQ9P2D6 1515 aa12.66□□□□□ -0.38
SMG7-215ENST00000515829 TMEM57Q8N5G2 664 aa12.66□□□□□ -0.38
SMG7-215ENST00000515829 DISP1Q96F81 1524 aa12.65□□□□□ -0.38
SMG7-215ENST00000515829 LMOD3Q0VAK6 560 aa12.65□□□□□ -0.38
SMG7-215ENST00000515829 MCTP1Q6DN14 999 aa12.65□□□□□ -0.38
SMG7-215ENST00000515829 SSH1Q8WYL5 1049 aa12.65□□□□□ -0.38
SMG7-215ENST00000515829 DMRT2Q9Y5R5 561 aa12.65□□□□□ -0.38
SMG7-215ENST00000515829 NINLQ9Y2I6 1382 aa12.65□□□□□ -0.38
SMG7-215ENST00000515829 RILPL2Q969X0 211 aa12.64□□□□□ -0.39
SMG7-215ENST00000515829 ADAMTS12P58397 1594 aa12.64□□□□□ -0.39
SMG7-215ENST00000515829 ABCA5Q8WWZ7 1642 aa12.64□□□□□ -0.39
SMG7-215ENST00000515829 HMMRO75330 724 aa12.64□□□□□ -0.39
SMG7-215ENST00000515829 KDM2BQ8NHM5 1336 aa12.63□□□□□ -0.39
SMG7-215ENST00000515829 COG3Q96JB2 828 aa12.63□□□□□ -0.39
SMG7-215ENST00000515829 STK31Q9BXU1 1019 aa12.63□□□□□ -0.39
SMG7-215ENST00000515829 SCAF11Q99590 1463 aaKnown RBP12.63□□□□□ -0.39
SMG7-215ENST00000515829 TMPOP42166 694 aaKnown RBP12.63□□□□□ -0.39
SMG7-215ENST00000515829 VSIG10Q8N0Z9 540 aa12.63□□□□□ -0.39
SMG7-215ENST00000515829 PRAM1Q96QH2 718 aa12.63□□□□□ -0.39
SMG7-215ENST00000515829 THUMPD2Q9BTF0 503 aaKnown RBP12.63□□□□□ -0.39
SMG7-215ENST00000515829 RLBP1P12271 317 aa12.63□□□□□ -0.39
SMG7-215ENST00000515829 NECTIN2Q92692 538 aa12.63□□□□□ -0.39
SMG7-215ENST00000515829 LMOD2Q6P5Q4 547 aa12.63□□□□□ -0.39
SMG7-215ENST00000515829 CHMP4AQ9BY43 222 aa12.62□□□□□ -0.39
SMG7-215ENST00000515829 ARHGEF12Q9NZN5 1544 aa12.62□□□□□ -0.39
SMG7-215ENST00000515829 KDM5BQ9UGL1 1544 aa12.62□□□□□ -0.39
SMG7-215ENST00000515829 PRKCSHP14314 528 aaPredicted RBP12.62□□□□□ -0.39
SMG7-215ENST00000515829 API5Q9BZZ5 524 aaKnown RBP12.62□□□□□ -0.39
SMG7-215ENST00000515829 TAOK2Q9UL54 1235 aa12.62□□□□□ -0.39
SMG7-215ENST00000515829 GNAI1P63096 354 aa12.62□□□□□ -0.39
SMG7-215ENST00000515829 ITSN2Q9NZM3 1697 aa12.62□□□□□ -0.39
SMG7-215ENST00000515829 CARD14Q9BXL6 1004 aa12.61□□□□□ -0.39
SMG7-215ENST00000515829 CHD1LQ86WJ1 897 aa12.61□□□□□ -0.39
SMG7-215ENST00000515829 TRIM27P14373 513 aa12.61□□□□□ -0.39
SMG7-215ENST00000515829 CABP1Q9NZU7 370 aa12.61□□□□□ -0.39
SMG7-215ENST00000515829 CDC45O75419 566 aa12.6□□□□□ -0.39
SMG7-215ENST00000515829 TBC1D32Q96NH3 1257 aa12.6□□□□□ -0.39
SMG7-215ENST00000515829 GRPEL1Q9HAV7 217 aa12.6□□□□□ -0.39
SMG7-215ENST00000515829 KIAA1211Q6ZU35 1233 aa12.6□□□□□ -0.39
SMG7-215ENST00000515829 LTV1Q96GA3 475 aaPredicted RBP12.6□□□□□ -0.39
SMG7-215ENST00000515829 COL17A1Q9UMD9 1497 aaPredicted RBP12.6□□□□□ -0.39
SMG7-215ENST00000515829 A2MP01023 1474 aa12.6□□□□□ -0.39
SMG7-215ENST00000515829 SYCP2Q9BX26 1530 aa12.59□□□□□ -0.39
SMG7-215ENST00000515829 NASPP49321 788 aaPredicted RBP12.59□□□□□ -0.39
SMG7-215ENST00000515829 TWISTNBQ3B726 338 aaPredicted RBP12.59□□□□□ -0.39
SMG7-215ENST00000515829 GPRASP1Q5JY77 1395 aa12.59□□□□□ -0.39
SMG7-215ENST00000515829 CAVIN1Q6NZI2 390 aaKnown RBP12.59□□□□□ -0.39
SMG7-215ENST00000515829 ADGRL2O95490 1459 aa12.58□□□□□ -0.39
SMG7-215ENST00000515829 GOLGA6L4A6NEF3 574 aa12.58□□□□□ -0.4
SMG7-215ENST00000515829 ASXL1Q8IXJ9 1541 aa12.58□□□□□ -0.4
SMG7-215ENST00000515829 INTS3Q68E01 1043 aaKnown RBP12.58□□□□□ -0.4
SMG7-215ENST00000515829 KDM5CP41229 1560 aa12.57□□□□□ -0.4
SMG7-215ENST00000515829 REC8O95072 547 aa12.57□□□□□ -0.4
SMG7-215ENST00000515829 KIF21AQ7Z4S6 1674 aa12.57□□□□□ -0.4
SMG7-215ENST00000515829 FGD1P98174 961 aa12.57□□□□□ -0.4
SMG7-215ENST00000515829 NAP1L2Q9ULW6 460 aaPredicted RBP12.57□□□□□ -0.4
SMG7-215ENST00000515829 KIAA2012Q0VF49 1180 aa12.57□□□□□ -0.4
SMG7-215ENST00000515829 SYAP1Q96A49 352 aaPredicted RBP12.57□□□□□ -0.4
SMG7-215ENST00000515829 ANO2Q9NQ90 1003 aa12.57□□□□□ -0.4
SMG7-215ENST00000515829 CT47B1P0C2W7 299 aaPredicted RBP12.56□□□□□ -0.4
SMG7-215ENST00000515829 AMPHP49418 695 aa12.56□□□□□ -0.4
SMG7-215ENST00000515829 CDK19Q9BWU1 502 aa12.56□□□□□ -0.4
SMG7-215ENST00000515829 FBLN1P23142 703 aa12.56□□□□□ -0.4
SMG7-215ENST00000515829 RNF214Q8ND24 703 aa12.56□□□□□ -0.4
SMG7-215ENST00000515829 GCC1Q96CN9 775 aa12.56□□□□□ -0.4
SMG7-215ENST00000515829 BLMP54132 1417 aaPredicted RBP12.56□□□□□ -0.4
SMG7-215ENST00000515829 K7ELQ4 463 aaPredicted RBP12.56□□□□□ -0.4
SMG7-215ENST00000515829 NUCB2P80303 420 aa12.56□□□□□ -0.4
SMG7-215ENST00000515829 PANK2Q9BZ23 570 aa12.56□□□□□ -0.4
SMG7-215ENST00000515829 PRPF40AO75400 957 aaKnown RBP12.55□□□□□ -0.4
SMG7-215ENST00000515829 RAPGEF3O95398 923 aa12.55□□□□□ -0.4
SMG7-215ENST00000515829 DRC7Q8IY82 874 aa12.55□□□□□ -0.4
SMG7-215ENST00000515829 ZMYM4Q5VZL5 1548 aa12.55□□□□□ -0.4
SMG7-215ENST00000515829 FAM13BQ9NYF5 915 aa12.55□□□□□ -0.4
SMG7-215ENST00000515829 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMG7-215ENST00000515829 NOS1P29475 1434 aa12.54□□□□□ -0.4
SMG7-215ENST00000515829 NGDNQ8NEJ9 315 aaKnown RBP12.54□□□□□ -0.4
SMG7-215ENST00000515829 BCORL1Q5H9F3 1711 aa12.54□□□□□ -0.4
SMG7-215ENST00000515829 SHANK2Q9UPX8 1470 aa12.54□□□□□ -0.4
SMG7-215ENST00000515829 TNPO1Q92973 898 aaKnown RBP12.53□□□□□ -0.4
SMG7-215ENST00000515829 GOLGA6L6A8MZA4 724 aa12.53□□□□□ -0.4
SMG7-215ENST00000515829 ESPNB1AK53 854 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 225.3 ms