RNA–Protein interactions for RNA: ENST00000515693.1

CCSER1-213, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 5

Gene CCSER1, Length 413 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-213ENST00000515693 MSS51Q4VC12 460 aa8.56□□□□□ -1.04
CCSER1-213ENST00000515693 TTC24A2A3L6 582 aaPredicted RBP8.54□□□□□ -1.04
CCSER1-213ENST00000515693 J3QL48 77 aa8.54□□□□□ -1.04
CCSER1-213ENST00000515693 WNT7AO00755 349 aa8.54□□□□□ -1.04
CCSER1-213ENST00000515693 SNRPBP14678 240 aaKnown RBP8.54□□□□□ -1.04
CCSER1-213ENST00000515693 WIPF1O43516 503 aa8.53□□□□□ -1.04
CCSER1-213ENST00000515693 MRGPRX2Q96LB1 330 aa8.53□□□□□ -1.04
CCSER1-213ENST00000515693 MMP16P51512 607 aa8.52□□□□□ -1.05
CCSER1-213ENST00000515693 TRIM32Q13049 653 aa8.52□□□□□ -1.05
CCSER1-213ENST00000515693 SULF1Q8IWU6 871 aa8.52□□□□□ -1.05
CCSER1-213ENST00000515693 SNIP1Q8TAD8 396 aaKnown RBP8.52□□□□□ -1.05
CCSER1-213ENST00000515693 ATP13A2Q9NQ11 1180 aa8.52□□□□□ -1.05
CCSER1-213ENST00000515693 ZBTB24O43167 697 aaPredicted RBP8.51□□□□□ -1.05
CCSER1-213ENST00000515693 HPS1Q92902 700 aa8.5□□□□□ -1.05
CCSER1-213ENST00000515693 DXOO77932 396 aaKnown RBP8.48□□□□□ -1.05
CCSER1-213ENST00000515693 HLA-CQ95604 372 aa8.48□□□□□ -1.05
CCSER1-213ENST00000515693 TRIM47Q96LD4 638 aa8.48□□□□□ -1.05
CCSER1-213ENST00000515693 STK17AQ9UEE5 414 aa8.48□□□□□ -1.05
CCSER1-213ENST00000515693 TERTO14746 1132 aaKnown RBP8.47□□□□□ -1.05
CCSER1-213ENST00000515693 CD46P15529 392 aa8.47□□□□□ -1.05
CCSER1-213ENST00000515693 SKOR1P84550 965 aa8.47□□□□□ -1.05
CCSER1-213ENST00000515693 SMYD5Q6GMV2 418 aa8.47□□□□□ -1.05
CCSER1-213ENST00000515693 Q3C1V9 767 aa8.45□□□□□ -1.06
CCSER1-213ENST00000515693 GRIPAP1Q4V328 841 aa8.45□□□□□ -1.06
CCSER1-213ENST00000515693 USB1Q9BQ65 265 aaKnown RBP8.45□□□□□ -1.06
CCSER1-213ENST00000515693 RC3H1Q5TC82 1133 aaKnown RBP8.44□□□□□ -1.06
CCSER1-213ENST00000515693 KDM4AO75164 1064 aa8.42□□□□□ -1.06
CCSER1-213ENST00000515693 INSM1Q01101 510 aaPredicted RBP8.42□□□□□ -1.06
CCSER1-213ENST00000515693 SENP2Q9HC62 589 aa8.41□□□□□ -1.06
CCSER1-213ENST00000515693 LORP23490 312 aaPredicted RBP8.4□□□□□ -1.06
CCSER1-213ENST00000515693 GPIHBP1Q8IV16 184 aa8.4□□□□□ -1.06
CCSER1-213ENST00000515693 CCDC24Q8N4L8 307 aa8.4□□□□□ -1.06
CCSER1-213ENST00000515693 SIAH2O43255 324 aa8.39□□□□□ -1.07
CCSER1-213ENST00000515693 GUCA2AQ02747 115 aa8.39□□□□□ -1.07
CCSER1-213ENST00000515693 PTCRAQ6ISU1 281 aaPredicted RBP8.39□□□□□ -1.07
CCSER1-213ENST00000515693 SYMPKQ92797 1274 aaKnown RBP8.39□□□□□ -1.07
CCSER1-213ENST00000515693 REPIN1Q9BWE0 567 aaKnown RBP8.39□□□□□ -1.07
CCSER1-213ENST00000515693 WNT7BP56706 349 aa8.38□□□□□ -1.07
CCSER1-213ENST00000515693 HOXA2O43364 376 aa8.37□□□□□ -1.07
CCSER1-213ENST00000515693 IRF6O14896 467 aa8.36□□□□□ -1.07
CCSER1-213ENST00000515693 ALDH1A1P00352 501 aa8.36□□□□□ -1.07
CCSER1-213ENST00000515693 MDM2Q00987 491 aaPredicted RBP8.36□□□□□ -1.07
CCSER1-213ENST00000515693 MAP2K5Q13163 448 aa8.36□□□□□ -1.07
CCSER1-213ENST00000515693 TRIM46Q7Z4K8 759 aa8.36□□□□□ -1.07
CCSER1-213ENST00000515693 KIFC2Q96AC6 838 aa8.36□□□□□ -1.07
CCSER1-213ENST00000515693 USP46P62068 366 aa8.35□□□□□ -1.07
CCSER1-213ENST00000515693 BMP1P13497 986 aa8.34□□□□□ -1.07
CCSER1-213ENST00000515693 JUNDP17535 347 aa8.34□□□□□ -1.07
CCSER1-213ENST00000515693 GMPRP36959 345 aa8.33□□□□□ -1.08
CCSER1-213ENST00000515693 NXF1Q9UBU9 619 aaKnown RBP8.33□□□□□ -1.08
CCSER1-213ENST00000515693 VEGFBP49765 207 aa8.31□□□□□ -1.08
CCSER1-213ENST00000515693 PCDHGC3Q9UN70 934 aa8.31□□□□□ -1.08
CCSER1-213ENST00000515693 SH3BP2P78314 561 aa8.3□□□□□ -1.08
CCSER1-213ENST00000515693 NUDT12Q9BQG2 462 aa8.3□□□□□ -1.08
CCSER1-213ENST00000515693 FAM217BQ9NTX9 383 aaPredicted RBP8.3□□□□□ -1.08
CCSER1-213ENST00000515693 CAPN5O15484 640 aaPredicted RBP8.29□□□□□ -1.08
CCSER1-213ENST00000515693 PLCB2Q00722 1185 aa8.29□□□□□ -1.08
CCSER1-213ENST00000515693 EHBP1Q8NDI1 1231 aa8.29□□□□□ -1.08
CCSER1-213ENST00000515693 ERBB4Q15303 1308 aa8.29□□□□□ -1.08
CCSER1-213ENST00000515693 MINK1Q8N4C8 1332 aaPredicted RBP8.29□□□□□ -1.08
CCSER1-213ENST00000515693 RETREG3Q86VR2 466 aa8.28□□□□□ -1.08
CCSER1-213ENST00000515693 SLC16A10Q8TF71 515 aa8.28□□□□□ -1.08
CCSER1-213ENST00000515693 H3BM21 787 aa8.27□□□□□ -1.09
CCSER1-213ENST00000515693 CCDC102AQ96A19 550 aa8.27□□□□□ -1.09
CCSER1-213ENST00000515693 KDM2AQ9Y2K7 1162 aa8.27□□□□□ -1.09
CCSER1-213ENST00000515693 NPAS3Q8IXF0 933 aa8.25□□□□□ -1.09
CCSER1-213ENST00000515693 ZSCAN1Q8NBB4 408 aa8.25□□□□□ -1.09
CCSER1-213ENST00000515693 ZFP42Q96MM3 310 aa8.25□□□□□ -1.09
CCSER1-213ENST00000515693 GPCPD1Q9NPB8 672 aa8.25□□□□□ -1.09
CCSER1-213ENST00000515693 WASF2Q9Y6W5 498 aa8.25□□□□□ -1.09
CCSER1-213ENST00000515693 IRF7Q92985 503 aa8.24□□□□□ -1.09
CCSER1-213ENST00000515693 TLL2Q9Y6L7 1015 aa8.24□□□□□ -1.09
CCSER1-213ENST00000515693 CCNYL3P0C7X3 344 aa8.23□□□□□ -1.09
CCSER1-213ENST00000515693 FDX1P10109 184 aa8.23□□□□□ -1.09
CCSER1-213ENST00000515693 MS4A1P11836 297 aa8.23□□□□□ -1.09
CCSER1-213ENST00000515693 CLCN1P35523 988 aa8.23□□□□□ -1.09
CCSER1-213ENST00000515693 BAP1Q92560 729 aa8.23□□□□□ -1.09
CCSER1-213ENST00000515693 EVA1BQ9NVM1 165 aa8.23□□□□□ -1.09
CCSER1-213ENST00000515693 NUTM1Q86Y26 1132 aa8.22□□□□□ -1.09
CCSER1-213ENST00000515693 UNC93B1Q9H1C4 597 aa8.22□□□□□ -1.09
CCSER1-213ENST00000515693 LOC100996750A0A140TA64 210 aa8.21□□□□□ -1.1
CCSER1-213ENST00000515693 C6orf229H3BNL8 230 aa8.21□□□□□ -1.1
CCSER1-213ENST00000515693 NDUFV2P19404 249 aa8.21□□□□□ -1.1
CCSER1-213ENST00000515693 LINC01559Q495D7 138 aa8.21□□□□□ -1.1
CCSER1-213ENST00000515693 KLF16Q9BXK1 252 aaPredicted RBP8.21□□□□□ -1.1
CCSER1-213ENST00000515693 KRTAP4-6Q9BYQ5 205 aa8.21□□□□□ -1.1
CCSER1-213ENST00000515693 PTPRNQ16849 979 aa8.2□□□□□ -1.1
CCSER1-213ENST00000515693 SPIRE2Q8WWL2 714 aa8.2□□□□□ -1.1
CCSER1-213ENST00000515693 FAM181BA6NEQ2 426 aa8.19□□□□□ -1.1
CCSER1-213ENST00000515693 SOBPA7XYQ1 873 aa8.19□□□□□ -1.1
CCSER1-213ENST00000515693 KCNH2Q12809 1159 aa8.19□□□□□ -1.1
CCSER1-213ENST00000515693 MPNDQ8N594 471 aa8.19□□□□□ -1.1
CCSER1-213ENST00000515693 MOXD2PA6NHM9 499 aa8.18□□□□□ -1.1
CCSER1-213ENST00000515693 TIMP2P16035 220 aa8.18□□□□□ -1.1
CCSER1-213ENST00000515693 NNTQ13423 1086 aa8.18□□□□□ -1.1
CCSER1-213ENST00000515693 MRPL14Q6P1L8 145 aaKnown RBP8.18□□□□□ -1.1
CCSER1-213ENST00000515693 ZNF511Q8NB15 262 aa8.18□□□□□ -1.1
CCSER1-213ENST00000515693 SSTR3P32745 418 aaPredicted RBP8.17□□□□□ -1.1
CCSER1-213ENST00000515693 PRR7Q8TB68 274 aa8.17□□□□□ -1.1
CCSER1-213ENST00000515693 VARSP26640 1264 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms