RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 PLEKHH1Q9ULM0 1364 aa37.16■■■■□ 3.54
DDR1-279ENST00000515529 NBPF1Q3BBV0 1214 aa37.14■■■■□ 3.54
DDR1-279ENST00000515529 SAFB2Q14151 953 aaKnown RBP eCLIP37.13■■■■□ 3.53
DDR1-279ENST00000515529 ROCK2O75116 1388 aaKnown RBP37.08■■■■□ 3.53
DDR1-279ENST00000515529 ROBO1Q9Y6N7 1651 aa37.08■■■■□ 3.53
DDR1-279ENST00000515529 HSPA1LP34931 641 aa37.07■■■■□ 3.52
DDR1-279ENST00000515529 MST1RQ04912 1400 aa37.06■■■■□ 3.52
DDR1-279ENST00000515529 TRPM1Q7Z4N2 1603 aa37.06■■■■□ 3.52
DDR1-279ENST00000515529 CDC42BPGQ6DT37 1551 aa37.05■■■■□ 3.52
DDR1-279ENST00000515529 NBPF8Q3BBV2 869 aa37.05■■■■□ 3.52
DDR1-279ENST00000515529 TIMELESSQ9UNS1 1208 aa37.03■■■■□ 3.52
DDR1-279ENST00000515529 ARHGEF28Q8N1W1 1705 aaKnown RBP37■■■■□ 3.51
DDR1-279ENST00000515529 C1orf167Q5SNV9 1468 aa36.99■■■■□ 3.51
DDR1-279ENST00000515529 MINK1Q8N4C8 1332 aaPredicted RBP36.98■■■■□ 3.51
DDR1-279ENST00000515529 BRINP3Q76B58 766 aa36.97■■■■□ 3.51
DDR1-279ENST00000515529 HIRIP3Q9BW71 556 aaPredicted RBP36.95■■■■□ 3.51
DDR1-279ENST00000515529 NUTM2FA1L443 756 aa36.93■■■■□ 3.5
DDR1-279ENST00000515529 RALGAPBQ86X10 1494 aa36.93■■■■□ 3.5
DDR1-279ENST00000515529 CARD11Q9BXL7 1154 aa36.92■■■■□ 3.5
DDR1-279ENST00000515529 CENPJQ9HC77 1338 aaPredicted RBP36.91■■■■□ 3.5
DDR1-279ENST00000515529 EIF3AQ14152 1382 aaKnown RBP36.91■■■■□ 3.5
DDR1-279ENST00000515529 GPRASP1Q5JY77 1395 aa36.91■■■■□ 3.5
DDR1-279ENST00000515529 ADGRB2O60241 1585 aa36.9■■■■□ 3.5
DDR1-279ENST00000515529 ESCO1Q5FWF5 840 aa36.89■■■■□ 3.5
DDR1-279ENST00000515529 FMN2Q9NZ56 1722 aa36.88■■■■□ 3.49
DDR1-279ENST00000515529 ORAI2Q96SN7 254 aa36.87■■■■□ 3.49
DDR1-279ENST00000515529 PHLPP1O60346 1717 aa36.86■■■■□ 3.49
DDR1-279ENST00000515529 WASLO00401 505 aaPredicted RBP36.84■■■■□ 3.49
DDR1-279ENST00000515529 AHDC1Q5TGY3 1603 aaPredicted RBP36.83■■■■□ 3.49
DDR1-279ENST00000515529 ANKARQ7Z5J8 1434 aa36.78■■■■□ 3.48
DDR1-279ENST00000515529 QRICH2Q9H0J4 1663 aa36.77■■■■□ 3.48
DDR1-279ENST00000515529 TULP4Q9NRJ4 1543 aa36.75■■■■□ 3.47
DDR1-279ENST00000515529 NHSL1Q5SYE7 1610 aa36.75■■■■□ 3.47
DDR1-279ENST00000515529 DDX17Q92841 729 aaKnown RBP36.75■■■■□ 3.47
DDR1-279ENST00000515529 CDK19Q9BWU1 502 aa36.75■■■■□ 3.47
DDR1-279ENST00000515529 COL16A1Q07092 1604 aaPredicted RBP36.74■■■■□ 3.47
DDR1-279ENST00000515529 NPHP3Q7Z494 1330 aa36.73■■■■□ 3.47
DDR1-279ENST00000515529 PHF8Q9UPP1 1060 aa36.72■■■■□ 3.47
DDR1-279ENST00000515529 KIF1AQ12756 1690 aa36.7■■■■□ 3.47
DDR1-279ENST00000515529 JCADQ9P266 1359 aa36.7■■■■□ 3.47
DDR1-279ENST00000515529 FOXO3O43524 673 aa36.7■■■■□ 3.47
DDR1-279ENST00000515529 SRPK2P78362 688 aaKnown RBP36.7■■■■□ 3.47
DDR1-279ENST00000515529 LRRC59Q96AG4 307 aaKnown RBP36.68■■■■□ 3.46
DDR1-279ENST00000515529 RGPD8O14715 1765 aaPredicted RBP36.68■■■■□ 3.46
DDR1-279ENST00000515529 EVC2Q86UK5 1308 aa36.67■■■■□ 3.46
DDR1-279ENST00000515529 NUDT16Q96DE0 195 aaKnown RBP36.67■■■■□ 3.46
DDR1-279ENST00000515529 USP32Q8NFA0 1604 aa36.67■■■■□ 3.46
DDR1-279ENST00000515529 PRR36Q9H6K5 1346 aa36.66■■■■□ 3.46
DDR1-279ENST00000515529 PMFBP1Q8TBY8 1022 aa36.64■■■■□ 3.46
DDR1-279ENST00000515529 SOS2Q07890 1332 aaPredicted RBP36.63■■■■□ 3.45
DDR1-279ENST00000515529 ATP7BP35670 1465 aa36.62■■■■□ 3.45
DDR1-279ENST00000515529 XPCQ01831 940 aaPredicted RBP36.61■■■■□ 3.45
DDR1-279ENST00000515529 CABP2Q9NPB3 220 aa36.6■■■■□ 3.45
DDR1-279ENST00000515529 SBNO2Q9Y2G9 1366 aa36.6■■■■□ 3.45
DDR1-279ENST00000515529 PSME1Q06323 249 aa36.59■■■■□ 3.45
DDR1-279ENST00000515529 CCDC61Q9Y6R9 512 aa36.59■■■■□ 3.45
DDR1-279ENST00000515529 ITSN1Q15811 1721 aa36.59■■■■□ 3.45
DDR1-279ENST00000515529 USP47Q96K76 1375 aa36.58■■■■□ 3.45
DDR1-279ENST00000515529 NGDNQ8NEJ9 315 aaKnown RBP36.58■■■■□ 3.45
DDR1-279ENST00000515529 KRT28Q7Z3Y7 464 aa36.57■■■■□ 3.44
DDR1-279ENST00000515529 PXDNQ92626 1479 aa36.56■■■■□ 3.44
DDR1-279ENST00000515529 ST20-MTHFSA0A0A6YYL1 179 aa36.56■■■■□ 3.44
DDR1-279ENST00000515529 SHPRHQ149N8 1683 aa36.54■■■■□ 3.44
DDR1-279ENST00000515529 SPATA31A6Q5VVP1 1343 aa36.54■■■■□ 3.44
DDR1-279ENST00000515529 SLC24A1O60721 1099 aa36.53■■■■□ 3.44
DDR1-279ENST00000515529 MED1Q15648 1581 aaPredicted RBP36.51■■■■□ 3.44
DDR1-279ENST00000515529 PNPLA6Q8IY17 1366 aa36.5■■■■□ 3.43
DDR1-279ENST00000515529 PPIP5K1Q6PFW1 1433 aa36.49■■■■□ 3.43
DDR1-279ENST00000515529 TOPAZ1Q8N9V7 1692 aa36.48■■■■□ 3.43
DDR1-279ENST00000515529 PLEKHG3A1L390 1219 aa36.47■■■■□ 3.43
DDR1-279ENST00000515529 ATAD2Q6PL18 1390 aa36.46■■■■□ 3.43
DDR1-279ENST00000515529 DISP3Q9P2K9 1392 aa36.45■■■■□ 3.43
DDR1-279ENST00000515529 NUTM2BA6NNL0 878 aaPredicted RBP36.45■■■■□ 3.43
DDR1-279ENST00000515529 NUTM2EB1AL46 878 aaPredicted RBP36.45■■■■□ 3.43
DDR1-279ENST00000515529 NUTM2AQ8IVF1 878 aaPredicted RBP36.45■■■■□ 3.43
DDR1-279ENST00000515529 SBNO1A3KN83 1393 aa36.44■■■■□ 3.42
DDR1-279ENST00000515529 ACEP12821 1306 aa36.44■■■■□ 3.42
DDR1-279ENST00000515529 SPATA31A3Q5VYP0 1347 aa36.44■■■■□ 3.42
DDR1-279ENST00000515529 TESK2Q96S53 571 aa36.44■■■■□ 3.42
DDR1-279ENST00000515529 PHF23Q9BUL5 403 aaPredicted RBP36.44■■■■□ 3.42
DDR1-279ENST00000515529 MEX3CQ5U5Q3 659 aaKnown RBP36.43■■■■□ 3.42
DDR1-279ENST00000515529 LMOD2Q6P5Q4 547 aa36.43■■■■□ 3.42
DDR1-279ENST00000515529 CABP1Q9NZU7 370 aa36.42■■■■□ 3.42
DDR1-279ENST00000515529 TNS3Q68CZ2 1445 aa36.42■■■■□ 3.42
DDR1-279ENST00000515529 POLR3AO14802 1390 aaPredicted RBP36.4■■■■□ 3.42
DDR1-279ENST00000515529 PAK3O75914 559 aaPredicted RBP36.4■■■■□ 3.42
DDR1-279ENST00000515529 TMF1P82094 1093 aa36.39■■■■□ 3.42
DDR1-279ENST00000515529 EIF4G2P78344 907 aaKnown RBP eCLIP36.38■■■■□ 3.41
DDR1-279ENST00000515529 ARHGEF10O15013 1369 aa36.38■■■■□ 3.41
DDR1-279ENST00000515529 PUS7Q96PZ0 661 aaKnown RBP36.35■■■■□ 3.41
DDR1-279ENST00000515529 LRP6O75581 1613 aa36.34■■■■□ 3.41
DDR1-279ENST00000515529 TMC1Q8TDI8 760 aa36.33■■■■□ 3.41
DDR1-279ENST00000515529 COL22A1Q8NFW1 1626 aaPredicted RBP36.33■■■■□ 3.41
DDR1-279ENST00000515529 CDCA8Q53HL2 280 aa36.32■■■■□ 3.4
DDR1-279ENST00000515529 TRPM3Q9HCF6 1732 aaPredicted RBP36.31■■■■□ 3.4
DDR1-279ENST00000515529 HAP1P54257 671 aaPredicted RBP36.3■■■■□ 3.4
DDR1-279ENST00000515529 PLEKHG5O94827 1062 aa36.29■■■■□ 3.4
DDR1-279ENST00000515529 HSPA5P11021 654 aaKnown RBP36.28■■■■□ 3.4
DDR1-279ENST00000515529 ADAMTS2O95450 1211 aa36.27■■■■□ 3.4
DDR1-279ENST00000515529 ZNF692Q9BU19 519 aaPredicted RBP36.27■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms