RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 SPATA31E1Q6ZUB1 1445 aa22.48■■□□□ 1.19
DDR1-278ENST00000515233 ANKRD30BQ9BXX2 1392 aa22.48■■□□□ 1.19
DDR1-278ENST00000515233 CDC42BPGQ6DT37 1551 aa22.47■■□□□ 1.19
DDR1-278ENST00000515233 RGL3Q3MIN7 710 aa22.47■■□□□ 1.19
DDR1-278ENST00000515233 TECPR2O15040 1411 aa22.47■■□□□ 1.19
DDR1-278ENST00000515233 ESCO1Q5FWF5 840 aa22.46■■□□□ 1.19
DDR1-278ENST00000515233 FNBP4Q8N3X1 1017 aaPredicted RBP22.46■■□□□ 1.19
DDR1-278ENST00000515233 NPHP3Q7Z494 1330 aa22.46■■□□□ 1.19
DDR1-278ENST00000515233 RGS12O14924 1447 aa22.46■■□□□ 1.19
DDR1-278ENST00000515233 ABCC11Q96J66 1382 aa22.45■■□□□ 1.18
DDR1-278ENST00000515233 COL22A1Q8NFW1 1626 aaPredicted RBP22.45■■□□□ 1.18
DDR1-278ENST00000515233 LRPPRCP42704 1394 aaKnown RBP22.44■■□□□ 1.18
DDR1-278ENST00000515233 IFT172Q9UG01 1749 aa22.44■■□□□ 1.18
DDR1-278ENST00000515233 USP21Q9UK80 565 aa22.44■■□□□ 1.18
DDR1-278ENST00000515233 ACIN1Q9UKV3 1341 aaKnown RBP22.43■■□□□ 1.18
DDR1-278ENST00000515233 WAPLQ7Z5K2 1190 aa22.43■■□□□ 1.18
DDR1-278ENST00000515233 STK26Q9P289 416 aa22.42■■□□□ 1.18
DDR1-278ENST00000515233 TRPC5Q9UL62 973 aaPredicted RBP22.42■■□□□ 1.18
DDR1-278ENST00000515233 FOXO3O43524 673 aa22.41■■□□□ 1.18
DDR1-278ENST00000515233 PXDNQ92626 1479 aa22.41■■□□□ 1.18
DDR1-278ENST00000515233 TMEM132EQ6IEE7 984 aa22.4■■□□□ 1.18
DDR1-278ENST00000515233 MYOM2P54296 1465 aa22.4■■□□□ 1.18
DDR1-278ENST00000515233 PIK3C2GO75747 1445 aa22.4■■□□□ 1.18
DDR1-278ENST00000515233 SIRT1Q96EB6 747 aa22.39■■□□□ 1.17
DDR1-278ENST00000515233 KNDC1Q76NI1 1749 aa22.39■■□□□ 1.17
DDR1-278ENST00000515233 NUTM2FA1L443 756 aa22.36■■□□□ 1.17
DDR1-278ENST00000515233 ATRNO75882 1429 aa22.36■■□□□ 1.17
DDR1-278ENST00000515233 PLEKHH1Q9ULM0 1364 aa22.36■■□□□ 1.17
DDR1-278ENST00000515233 YTHDC2Q9H6S0 1430 aaKnown RBP22.35■■□□□ 1.17
DDR1-278ENST00000515233 C14orf93Q9H972 538 aaKnown RBP22.35■■□□□ 1.17
DDR1-278ENST00000515233 XPCQ01831 940 aaPredicted RBP22.34■■□□□ 1.17
DDR1-278ENST00000515233 MARF1Q9Y4F3 1742 aaKnown RBP22.34■■□□□ 1.17
DDR1-278ENST00000515233 BCL9LQ86UU0 1499 aa22.34■■□□□ 1.17
DDR1-278ENST00000515233 FMN2Q9NZ56 1722 aa22.33■■□□□ 1.17
DDR1-278ENST00000515233 ATAD2Q6PL18 1390 aa22.33■■□□□ 1.17
DDR1-278ENST00000515233 SPATA31A3Q5VYP0 1347 aa22.31■■□□□ 1.16
DDR1-278ENST00000515233 NRXN1Q9ULB1 1477 aa22.3■■□□□ 1.16
DDR1-278ENST00000515233 KIF1AQ12756 1690 aa22.3■■□□□ 1.16
DDR1-278ENST00000515233 DHX57Q6P158 1386 aaKnown RBP22.29■■□□□ 1.16
DDR1-278ENST00000515233 CFAP70Q5T0N1 1121 aa22.28■■□□□ 1.16
DDR1-278ENST00000515233 KRT28Q7Z3Y7 464 aa22.28■■□□□ 1.16
DDR1-278ENST00000515233 GJD4Q96KN9 370 aaPredicted RBP22.28■■□□□ 1.16
DDR1-278ENST00000515233 PHF8Q9UPP1 1060 aa22.25■■□□□ 1.15
DDR1-278ENST00000515233 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.25■■□□□ 1.15
DDR1-278ENST00000515233 PSME1Q06323 249 aa22.24■■□□□ 1.15
DDR1-278ENST00000515233 CCDC125Q86Z20 511 aa22.24■■□□□ 1.15
DDR1-278ENST00000515233 UNC5CLQ8IV45 518 aa22.24■■□□□ 1.15
DDR1-278ENST00000515233 SLIT2O94813 1529 aa22.24■■□□□ 1.15
DDR1-278ENST00000515233 RGPD8O14715 1765 aaPredicted RBP22.24■■□□□ 1.15
DDR1-278ENST00000515233 PRAM1Q96QH2 718 aa22.22■■□□□ 1.15
DDR1-278ENST00000515233 TNS3Q68CZ2 1445 aa22.2■■□□□ 1.14
DDR1-278ENST00000515233 DLC1Q96QB1 1528 aa22.2■■□□□ 1.14
DDR1-278ENST00000515233 SBNO1A3KN83 1393 aa22.19■■□□□ 1.14
DDR1-278ENST00000515233 RAB3GAP2Q9H2M9 1393 aa22.19■■□□□ 1.14
DDR1-278ENST00000515233 USP32Q8NFA0 1604 aa22.19■■□□□ 1.14
DDR1-278ENST00000515233 EP400Q96L91 3159 aa22.18■■□□□ 1.14
DDR1-278ENST00000515233 RALGAPBQ86X10 1494 aa22.17■■□□□ 1.14
DDR1-278ENST00000515233 SAFB2Q14151 953 aaKnown RBP eCLIP22.17■■□□□ 1.14
DDR1-278ENST00000515233 POGKQ9P215 609 aa22.17■■□□□ 1.14
DDR1-278ENST00000515233 GLI3P10071 1580 aa22.16■■□□□ 1.14
DDR1-278ENST00000515233 ANKARQ7Z5J8 1434 aa22.16■■□□□ 1.14
DDR1-278ENST00000515233 HAP1P54257 671 aaPredicted RBP22.15■■□□□ 1.14
DDR1-278ENST00000515233 CABLES1Q8TDN4 633 aa22.15■■□□□ 1.14
DDR1-278ENST00000515233 STAC3Q96MF2 364 aa22.15■■□□□ 1.14
DDR1-278ENST00000515233 ADGRB1O14514 1584 aa22.15■■□□□ 1.14
DDR1-278ENST00000515233 ARHGEF10O15013 1369 aa22.14■■□□□ 1.14
DDR1-278ENST00000515233 ADGRB2O60241 1585 aa22.13■■□□□ 1.13
DDR1-278ENST00000515233 ONECUT3O60422 494 aaPredicted RBP22.13■■□□□ 1.13
DDR1-278ENST00000515233 VPS72Q15906 364 aa22.13■■□□□ 1.13
DDR1-278ENST00000515233 PMFBP1Q8TBY8 1022 aa22.13■■□□□ 1.13
DDR1-278ENST00000515233 ZRANB1Q9UGI0 708 aa22.13■■□□□ 1.13
DDR1-278ENST00000515233 TRAK1Q9UPV9 953 aa22.12■■□□□ 1.13
DDR1-278ENST00000515233 NWD2Q9ULI1 1742 aa22.11■■□□□ 1.13
DDR1-278ENST00000515233 LMOD2Q6P5Q4 547 aa22.1■■□□□ 1.13
DDR1-278ENST00000515233 DCAF11Q8TEB1 546 aa22.1■■□□□ 1.13
DDR1-278ENST00000515233 FAM83GA6ND36 823 aa22.09■■□□□ 1.13
DDR1-278ENST00000515233 HRCP23327 699 aa22.09■■□□□ 1.13
DDR1-278ENST00000515233 ABCA3Q99758 1704 aa22.09■■□□□ 1.13
DDR1-278ENST00000515233 PLCH1Q4KWH8 1693 aa22.08■■□□□ 1.13
DDR1-278ENST00000515233 BLMP54132 1417 aaPredicted RBP22.08■■□□□ 1.13
DDR1-278ENST00000515233 SEPT12Q8IYM1 358 aa22.08■■□□□ 1.13
DDR1-278ENST00000515233 KDM2AQ9Y2K7 1162 aa22.08■■□□□ 1.13
DDR1-278ENST00000515233 EIF3AQ14152 1382 aaKnown RBP22.08■■□□□ 1.12
DDR1-278ENST00000515233 BRWD3Q6RI45 1802 aa22.08■■□□□ 1.12
DDR1-278ENST00000515233 HIRIP3Q9BW71 556 aaPredicted RBP22.07■■□□□ 1.12
DDR1-278ENST00000515233 WASLO00401 505 aaPredicted RBP22.06■■□□□ 1.12
DDR1-278ENST00000515233 PLEKHG5O94827 1062 aa22.06■■□□□ 1.12
DDR1-278ENST00000515233 GPRASP1Q5JY77 1395 aa22.06■■□□□ 1.12
DDR1-278ENST00000515233 TRPM3Q9HCF6 1732 aaPredicted RBP22.06■■□□□ 1.12
DDR1-278ENST00000515233 MINK1Q8N4C8 1332 aaPredicted RBP22.06■■□□□ 1.12
DDR1-278ENST00000515233 PRR36Q9H6K5 1346 aa22.06■■□□□ 1.12
DDR1-278ENST00000515233 SRCAPQ6ZRS2 3230 aa22.04■■□□□ 1.12
DDR1-278ENST00000515233 TULP4Q9NRJ4 1543 aa22.04■■□□□ 1.12
DDR1-278ENST00000515233 CCDC9Q9Y3X0 531 aaKnown RBP22.03■■□□□ 1.12
DDR1-278ENST00000515233 ALS2Q96Q42 1657 aa22.03■■□□□ 1.12
DDR1-278ENST00000515233 KRT27Q7Z3Y8 459 aa22.02■■□□□ 1.12
DDR1-278ENST00000515233 SF3B2Q13435 895 aaKnown RBP22■■□□□ 1.11
DDR1-278ENST00000515233 BTG4Q9NY30 223 aa22■■□□□ 1.11
DDR1-278ENST00000515233 NGDNQ8NEJ9 315 aaKnown RBP21.99■■□□□ 1.11
DDR1-278ENST00000515233 NRAPQ86VF7 1730 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms