RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 TMEM132EQ6IEE7 984 aa21.7■■□□□ 1.06
SGCA-211ENST00000514934 DDX17Q92841 729 aaKnown RBP21.68■■□□□ 1.06
SGCA-211ENST00000514934 DHX57Q6P158 1386 aaKnown RBP21.68■■□□□ 1.06
SGCA-211ENST00000514934 DLC1Q96QB1 1528 aa21.68■■□□□ 1.06
SGCA-211ENST00000514934 COL22A1Q8NFW1 1626 aaPredicted RBP21.68■■□□□ 1.06
SGCA-211ENST00000514934 SPATA31A6Q5VVP1 1343 aa21.67■■□□□ 1.06
SGCA-211ENST00000514934 POTEAQ6S8J7 498 aa21.66■■□□□ 1.06
SGCA-211ENST00000514934 WAPLQ7Z5K2 1190 aa21.66■■□□□ 1.06
SGCA-211ENST00000514934 USP32Q8NFA0 1604 aa21.66■■□□□ 1.06
SGCA-211ENST00000514934 CFAP70Q5T0N1 1121 aa21.65■■□□□ 1.06
SGCA-211ENST00000514934 ORAI2Q96SN7 254 aa21.65■■□□□ 1.06
SGCA-211ENST00000514934 ADGRB2O60241 1585 aa21.65■■□□□ 1.06
SGCA-211ENST00000514934 PNPLA6Q8IY17 1366 aa21.64■■□□□ 1.06
SGCA-211ENST00000514934 ARHGEF28Q8N1W1 1705 aaKnown RBP21.64■■□□□ 1.06
SGCA-211ENST00000514934 PXDNQ92626 1479 aa21.64■■□□□ 1.05
SGCA-211ENST00000514934 SOS2Q07890 1332 aaPredicted RBP21.63■■□□□ 1.05
SGCA-211ENST00000514934 SIRT1Q96EB6 747 aa21.63■■□□□ 1.05
SGCA-211ENST00000514934 STK26Q9P289 416 aa21.63■■□□□ 1.05
SGCA-211ENST00000514934 KIAA1210Q9ULL0 1709 aa21.63■■□□□ 1.05
SGCA-211ENST00000514934 MARF1Q9Y4F3 1742 aaKnown RBP21.62■■□□□ 1.05
SGCA-211ENST00000514934 KIF1AQ12756 1690 aa21.62■■□□□ 1.05
SGCA-211ENST00000514934 LRRC59Q96AG4 307 aaKnown RBP21.56■■□□□ 1.04
SGCA-211ENST00000514934 ABCA3Q99758 1704 aa21.53■■□□□ 1.04
SGCA-211ENST00000514934 DCAF11Q8TEB1 546 aa21.52■■□□□ 1.04
SGCA-211ENST00000514934 TRPM3Q9HCF6 1732 aaPredicted RBP21.52■■□□□ 1.03
SGCA-211ENST00000514934 STAC3Q96MF2 364 aa21.51■■□□□ 1.03
SGCA-211ENST00000514934 PRAM1Q96QH2 718 aa21.5■■□□□ 1.03
SGCA-211ENST00000514934 ESCO1Q5FWF5 840 aa21.48■■□□□ 1.03
SGCA-211ENST00000514934 KDM2AQ9Y2K7 1162 aa21.48■■□□□ 1.03
SGCA-211ENST00000514934 NPHP3Q7Z494 1330 aa21.48■■□□□ 1.03
SGCA-211ENST00000514934 NUTM2FA1L443 756 aa21.47■■□□□ 1.03
SGCA-211ENST00000514934 NUTM2BA6NNL0 878 aaPredicted RBP21.47■■□□□ 1.03
SGCA-211ENST00000514934 NUTM2EB1AL46 878 aaPredicted RBP21.47■■□□□ 1.03
SGCA-211ENST00000514934 NUTM2AQ8IVF1 878 aaPredicted RBP21.47■■□□□ 1.03
SGCA-211ENST00000514934 TOPAZ1Q8N9V7 1692 aa21.47■■□□□ 1.03
SGCA-211ENST00000514934 ANKARQ7Z5J8 1434 aa21.46■■□□□ 1.03
SGCA-211ENST00000514934 FOXO3O43524 673 aa21.46■■□□□ 1.03
SGCA-211ENST00000514934 ALS2Q96Q42 1657 aa21.46■■□□□ 1.03
SGCA-211ENST00000514934 CRYBG1Q9Y4K1 1723 aa21.46■■□□□ 1.03
SGCA-211ENST00000514934 TULP4Q9NRJ4 1543 aa21.45■■□□□ 1.02
SGCA-211ENST00000514934 ITSN1Q15811 1721 aa21.45■■□□□ 1.02
SGCA-211ENST00000514934 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.44■■□□□ 1.02
SGCA-211ENST00000514934 AFF2P51816 1311 aa21.44■■□□□ 1.02
SGCA-211ENST00000514934 TRPM1Q7Z4N2 1603 aa21.44■■□□□ 1.02
SGCA-211ENST00000514934 XPCQ01831 940 aaPredicted RBP21.43■■□□□ 1.02
SGCA-211ENST00000514934 SAFB2Q14151 953 aaKnown RBP eCLIP21.43■■□□□ 1.02
SGCA-211ENST00000514934 MEX3CQ5U5Q3 659 aaKnown RBP21.43■■□□□ 1.02
SGCA-211ENST00000514934 ZNF772Q68DY9 489 aaPredicted RBP21.43■■□□□ 1.02
SGCA-211ENST00000514934 TRAK1Q9UPV9 953 aa21.43■■□□□ 1.02
SGCA-211ENST00000514934 PRR36Q9H6K5 1346 aa21.43■■□□□ 1.02
SGCA-211ENST00000514934 CDK12Q9NYV4 1490 aaPredicted RBP21.43■■□□□ 1.02
SGCA-211ENST00000514934 ATP7BP35670 1465 aa21.4■■□□□ 1.02
SGCA-211ENST00000514934 SPATA31A3Q5VYP0 1347 aa21.4■■□□□ 1.02
SGCA-211ENST00000514934 TNS3Q68CZ2 1445 aa21.38■■□□□ 1.01
SGCA-211ENST00000514934 PHF8Q9UPP1 1060 aa21.38■■□□□ 1.01
SGCA-211ENST00000514934 QRICH2Q9H0J4 1663 aa21.37■■□□□ 1.01
SGCA-211ENST00000514934 EP400Q96L91 3159 aa21.37■■□□□ 1.01
SGCA-211ENST00000514934 C8orf37Q96NL8 207 aa21.37■■□□□ 1.01
SGCA-211ENST00000514934 POGKQ9P215 609 aa21.37■■□□□ 1.01
SGCA-211ENST00000514934 PLCH1Q4KWH8 1693 aa21.37■■□□□ 1.01
SGCA-211ENST00000514934 MINK1Q8N4C8 1332 aaPredicted RBP21.36■■□□□ 1.01
SGCA-211ENST00000514934 ADAMTS2O95450 1211 aa21.36■■□□□ 1.01
SGCA-211ENST00000514934 NBPF1Q3BBV0 1214 aa21.36■■□□□ 1.01
SGCA-211ENST00000514934 HIRIP3Q9BW71 556 aaPredicted RBP21.36■■□□□ 1.01
SGCA-211ENST00000514934 BCL9LQ86UU0 1499 aa21.36■■□□□ 1.01
SGCA-211ENST00000514934 SBNO1A3KN83 1393 aa21.36■■□□□ 1.01
SGCA-211ENST00000514934 FNBP4Q8N3X1 1017 aaPredicted RBP21.35■■□□□ 1.01
SGCA-211ENST00000514934 RGS12O14924 1447 aa21.35■■□□□ 1.01
SGCA-211ENST00000514934 NWD2Q9ULI1 1742 aa21.35■■□□□ 1.01
SGCA-211ENST00000514934 WASLO00401 505 aaPredicted RBP21.34■■□□□ 1.01
SGCA-211ENST00000514934 KRT28Q7Z3Y7 464 aa21.34■■□□□ 1.01
SGCA-211ENST00000514934 ATRNO75882 1429 aa21.34■■□□□ 1.01
SGCA-211ENST00000514934 SIN3AQ96ST3 1273 aa21.33■■□□□ 1.01
SGCA-211ENST00000514934 SLIT2O94813 1529 aa21.33■■□□□ 1
SGCA-211ENST00000514934 NRAPQ86VF7 1730 aa21.32■■□□□ 1
SGCA-211ENST00000514934 L3MBTL2Q969R5 705 aa21.32■■□□□ 1
SGCA-211ENST00000514934 EIF3AQ14152 1382 aaKnown RBP21.31■■□□□ 1
SGCA-211ENST00000514934 RXRBP28702 533 aa21.3■■□□□ 1
SGCA-211ENST00000514934 GLI3P10071 1580 aa21.3■■□□□ 1
SGCA-211ENST00000514934 NGLY1Q96IV0 654 aa21.29■■□□□ 1
SGCA-211ENST00000514934 PMFBP1Q8TBY8 1022 aa21.28■■□□□ 1
SGCA-211ENST00000514934 QTRT2Q9H974 415 aaKnown RBP21.28■■□□□ 1
SGCA-211ENST00000514934 PHRF1Q9P1Y6 1649 aaKnown RBP21.28■■□□□ 1
SGCA-211ENST00000514934 BRWD3Q6RI45 1802 aa21.27■■□□□ 1
SGCA-211ENST00000514934 RBM6P78332 1123 aaKnown RBP21.26■□□□□ 0.99
SGCA-211ENST00000514934 USP21Q9UK80 565 aa21.25■□□□□ 0.99
SGCA-211ENST00000514934 POLR3AO14802 1390 aaPredicted RBP21.24■□□□□ 0.99
SGCA-211ENST00000514934 ARHGEF10O15013 1369 aa21.24■□□□□ 0.99
SGCA-211ENST00000514934 CABLES1Q8TDN4 633 aa21.23■□□□□ 0.99
SGCA-211ENST00000514934 PSME1Q06323 249 aa21.22■□□□□ 0.99
SGCA-211ENST00000514934 NUDT16Q96DE0 195 aaKnown RBP21.22■□□□□ 0.99
SGCA-211ENST00000514934 COL14A1Q05707 1796 aaKnown RBP21.22■□□□□ 0.99
SGCA-211ENST00000514934 UPF1Q92900 1129 aaKnown RBP eCLIP21.21■□□□□ 0.99
SGCA-211ENST00000514934 CDK19Q9BWU1 502 aa21.21■□□□□ 0.99
SGCA-211ENST00000514934 TRPC5Q9UL62 973 aaPredicted RBP21.21■□□□□ 0.99
SGCA-211ENST00000514934 GPRASP1Q5JY77 1395 aa21.21■□□□□ 0.99
SGCA-211ENST00000514934 NBPF8Q3BBV2 869 aa21.2■□□□□ 0.98
SGCA-211ENST00000514934 AKAP12Q02952 1782 aa21.2■□□□□ 0.98
SGCA-211ENST00000514934 CENPJQ9HC77 1338 aaPredicted RBP21.19■□□□□ 0.98
SGCA-211ENST00000514934 RALGAPBQ86X10 1494 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms