RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 MYOM2P54296 1465 aa34.4■■■■□ 3.1
SMAD1-214ENST00000514831 MARF1Q9Y4F3 1742 aaKnown RBP34.4■■■■□ 3.1
SMAD1-214ENST00000514831 PXDNQ92626 1479 aa34.39■■■■□ 3.1
SMAD1-214ENST00000514831 KNDC1Q76NI1 1749 aa34.39■■■■□ 3.1
SMAD1-214ENST00000514831 TECPR2O15040 1411 aa34.38■■■■□ 3.09
SMAD1-214ENST00000514831 USP21Q9UK80 565 aa34.38■■■■□ 3.09
SMAD1-214ENST00000514831 NPHP3Q7Z494 1330 aa34.37■■■■□ 3.09
SMAD1-214ENST00000514831 FNBP4Q8N3X1 1017 aaPredicted RBP34.36■■■■□ 3.09
SMAD1-214ENST00000514831 CCDC144AA2RUR9 1427 aa34.36■■■■□ 3.09
SMAD1-214ENST00000514831 TRPC5Q9UL62 973 aaPredicted RBP34.35■■■■□ 3.09
SMAD1-214ENST00000514831 ATRNO75882 1429 aa34.35■■■■□ 3.09
SMAD1-214ENST00000514831 SPATA31E1Q6ZUB1 1445 aa34.34■■■■□ 3.09
SMAD1-214ENST00000514831 ATAD2Q6PL18 1390 aa34.34■■■■□ 3.09
SMAD1-214ENST00000514831 ADGRF5Q8IZF2 1346 aa34.32■■■■□ 3.09
SMAD1-214ENST00000514831 ESCO1Q5FWF5 840 aa34.32■■■■□ 3.08
SMAD1-214ENST00000514831 FOXD1Q16676 465 aa34.31■■■■□ 3.08
SMAD1-214ENST00000514831 ANKRD30BQ9BXX2 1392 aa34.31■■■■□ 3.08
SMAD1-214ENST00000514831 LRPPRCP42704 1394 aaKnown RBP34.3■■■■□ 3.08
SMAD1-214ENST00000514831 FMN2Q9NZ56 1722 aa34.29■■■■□ 3.08
SMAD1-214ENST00000514831 KIF1AQ12756 1690 aa34.27■■■■□ 3.08
SMAD1-214ENST00000514831 PIK3C2GO75747 1445 aa34.27■■■■□ 3.08
SMAD1-214ENST00000514831 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.27■■■■□ 3.08
SMAD1-214ENST00000514831 BCL9LQ86UU0 1499 aa34.26■■■■□ 3.07
SMAD1-214ENST00000514831 ABCC11Q96J66 1382 aa34.25■■■■□ 3.07
SMAD1-214ENST00000514831 FOXO3O43524 673 aa34.24■■■■□ 3.07
SMAD1-214ENST00000514831 WAPLQ7Z5K2 1190 aa34.22■■■■□ 3.07
SMAD1-214ENST00000514831 STK26Q9P289 416 aa34.22■■■■□ 3.07
SMAD1-214ENST00000514831 XPCQ01831 940 aaPredicted RBP34.21■■■■□ 3.07
SMAD1-214ENST00000514831 RGL3Q3MIN7 710 aa34.21■■■■□ 3.07
SMAD1-214ENST00000514831 PLEKHH1Q9ULM0 1364 aa34.21■■■■□ 3.07
SMAD1-214ENST00000514831 YTHDC2Q9H6S0 1430 aaKnown RBP34.18■■■■□ 3.06
SMAD1-214ENST00000514831 MPHOSPH9Q99550 1183 aa34.17■■■■□ 3.06
SMAD1-214ENST00000514831 NUTM2FA1L443 756 aa34.16■■■■□ 3.06
SMAD1-214ENST00000514831 TMEM132EQ6IEE7 984 aa34.15■■■■□ 3.06
SMAD1-214ENST00000514831 USP32Q8NFA0 1604 aa34.15■■■■□ 3.06
SMAD1-214ENST00000514831 SLIT2O94813 1529 aa34.12■■■■□ 3.05
SMAD1-214ENST00000514831 RGPD8O14715 1765 aaPredicted RBP34.11■■■■□ 3.05
SMAD1-214ENST00000514831 SPATA31A3Q5VYP0 1347 aa34.11■■■■□ 3.05
SMAD1-214ENST00000514831 NRXN1Q9ULB1 1477 aa34.1■■■■□ 3.05
SMAD1-214ENST00000514831 GJD4Q96KN9 370 aaPredicted RBP34.1■■■■□ 3.05
SMAD1-214ENST00000514831 GLI3P10071 1580 aa34.1■■■■□ 3.05
SMAD1-214ENST00000514831 EP400Q96L91 3159 aa34.09■■■■□ 3.05
SMAD1-214ENST00000514831 SIRT1Q96EB6 747 aa34.08■■■■□ 3.05
SMAD1-214ENST00000514831 RALGAPBQ86X10 1494 aa34.06■■■■□ 3.04
SMAD1-214ENST00000514831 ABCA3Q99758 1704 aa34.05■■■■□ 3.04
SMAD1-214ENST00000514831 CCDC125Q86Z20 511 aa34.05■■■■□ 3.04
SMAD1-214ENST00000514831 TNS3Q68CZ2 1445 aa34.04■■■■□ 3.04
SMAD1-214ENST00000514831 UNC5CLQ8IV45 518 aa34.04■■■■□ 3.04
SMAD1-214ENST00000514831 C14orf93Q9H972 538 aaKnown RBP34.03■■■■□ 3.04
SMAD1-214ENST00000514831 KRT28Q7Z3Y7 464 aa34.02■■■■□ 3.04
SMAD1-214ENST00000514831 PLCH1Q4KWH8 1693 aa34.02■■■■□ 3.04
SMAD1-214ENST00000514831 NWD2Q9ULI1 1742 aa34.01■■■■□ 3.03
SMAD1-214ENST00000514831 BRWD3Q6RI45 1802 aa34■■■■□ 3.03
SMAD1-214ENST00000514831 ACIN1Q9UKV3 1341 aaKnown RBP34■■■■□ 3.03
SMAD1-214ENST00000514831 DHX57Q6P158 1386 aaKnown RBP33.99■■■■□ 3.03
SMAD1-214ENST00000514831 ZRANB1Q9UGI0 708 aa33.99■■■■□ 3.03
SMAD1-214ENST00000514831 PHF8Q9UPP1 1060 aa33.98■■■■□ 3.03
SMAD1-214ENST00000514831 DLC1Q96QB1 1528 aa33.98■■■■□ 3.03
SMAD1-214ENST00000514831 ADGRB2O60241 1585 aa33.97■■■■□ 3.03
SMAD1-214ENST00000514831 SBNO1A3KN83 1393 aa33.96■■■■□ 3.03
SMAD1-214ENST00000514831 BLMP54132 1417 aaPredicted RBP33.95■■■■□ 3.02
SMAD1-214ENST00000514831 PSME1Q06323 249 aa33.94■■■■□ 3.02
SMAD1-214ENST00000514831 CFAP70Q5T0N1 1121 aa33.94■■■■□ 3.02
SMAD1-214ENST00000514831 SRCAPQ6ZRS2 3230 aa33.93■■■■□ 3.02
SMAD1-214ENST00000514831 ANKARQ7Z5J8 1434 aa33.93■■■■□ 3.02
SMAD1-214ENST00000514831 ARHGEF10O15013 1369 aa33.92■■■■□ 3.02
SMAD1-214ENST00000514831 HAP1P54257 671 aaPredicted RBP33.9■■■■□ 3.02
SMAD1-214ENST00000514831 PRAM1Q96QH2 718 aa33.9■■■■□ 3.02
SMAD1-214ENST00000514831 ADGRB1O14514 1584 aa33.89■■■■□ 3.02
SMAD1-214ENST00000514831 TRPM3Q9HCF6 1732 aaPredicted RBP33.88■■■■□ 3.01
SMAD1-214ENST00000514831 VPS72Q15906 364 aa33.88■■■■□ 3.01
SMAD1-214ENST00000514831 CABLES1Q8TDN4 633 aa33.87■■■■□ 3.01
SMAD1-214ENST00000514831 SAFB2Q14151 953 aaKnown RBP eCLIP33.86■■■■□ 3.01
SMAD1-214ENST00000514831 NRAPQ86VF7 1730 aa33.85■■■■□ 3.01
SMAD1-214ENST00000514831 ALS2Q96Q42 1657 aa33.84■■■■□ 3.01
SMAD1-214ENST00000514831 SEPT12Q8IYM1 358 aa33.82■■■■□ 3
SMAD1-214ENST00000514831 POGKQ9P215 609 aa33.81■■■■□ 3
SMAD1-214ENST00000514831 LMOD2Q6P5Q4 547 aa33.8■■■■□ 3
SMAD1-214ENST00000514831 ONECUT3O60422 494 aaPredicted RBP33.79■■■■□ 3
SMAD1-214ENST00000514831 TULP4Q9NRJ4 1543 aa33.78■■■■□ 3
SMAD1-214ENST00000514831 EIF3AQ14152 1382 aaKnown RBP33.77■■■■□ 3
SMAD1-214ENST00000514831 PLEKHG5O94827 1062 aa33.77■■■■□ 3
SMAD1-214ENST00000514831 PMFBP1Q8TBY8 1022 aa33.77■■■■□ 3
SMAD1-214ENST00000514831 COL14A1Q05707 1796 aaKnown RBP33.77■■■■□ 3
SMAD1-214ENST00000514831 RAB3GAP2Q9H2M9 1393 aa33.76■■■■□ 3
SMAD1-214ENST00000514831 CCDC9Q9Y3X0 531 aaKnown RBP33.76■■■□□ 2.99
SMAD1-214ENST00000514831 CRYBG1Q9Y4K1 1723 aa33.76■■■□□ 2.99
SMAD1-214ENST00000514831 FAM83GA6ND36 823 aa33.73■■■□□ 2.99
SMAD1-214ENST00000514831 SF3B2Q13435 895 aaKnown RBP33.73■■■□□ 2.99
SMAD1-214ENST00000514831 DEFB132Q7Z7B7 95 aa33.73■■■□□ 2.99
SMAD1-214ENST00000514831 KRT27Q7Z3Y8 459 aa33.72■■■□□ 2.99
SMAD1-214ENST00000514831 GPRASP1Q5JY77 1395 aa33.71■■■□□ 2.99
SMAD1-214ENST00000514831 TRAK1Q9UPV9 953 aa33.7■■■□□ 2.99
SMAD1-214ENST00000514831 PRR36Q9H6K5 1346 aa33.7■■■□□ 2.99
SMAD1-214ENST00000514831 HIRIP3Q9BW71 556 aaPredicted RBP33.69■■■□□ 2.98
SMAD1-214ENST00000514831 ITSN1Q15811 1721 aa33.68■■■□□ 2.98
SMAD1-214ENST00000514831 MINK1Q8N4C8 1332 aaPredicted RBP33.68■■■□□ 2.98
SMAD1-214ENST00000514831 LRP5O75197 1615 aa33.68■■■□□ 2.98
SMAD1-214ENST00000514831 ARHGEF28Q8N1W1 1705 aaKnown RBP33.67■■■□□ 2.98
SMAD1-214ENST00000514831 BTG4Q9NY30 223 aa33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms