RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 NPHP3Q7Z494 1330 aa15.53■□□□□ 0.08
DDR1-276ENST00000514534 ROBO2Q9HCK4 1378 aa15.52■□□□□ 0.08
DDR1-276ENST00000514534 MYOM2P54296 1465 aa15.52■□□□□ 0.07
DDR1-276ENST00000514534 ADRA2BP18089 450 aa15.51■□□□□ 0.07
DDR1-276ENST00000514534 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.5■□□□□ 0.07
DDR1-276ENST00000514534 BCL9LQ86UU0 1499 aa15.5■□□□□ 0.07
DDR1-276ENST00000514534 LRPPRCP42704 1394 aaKnown RBP15.49■□□□□ 0.07
DDR1-276ENST00000514534 CDC42BPGQ6DT37 1551 aa15.49■□□□□ 0.07
DDR1-276ENST00000514534 RPGRIP1LQ68CZ1 1315 aa15.49■□□□□ 0.07
DDR1-276ENST00000514534 GJD4Q96KN9 370 aaPredicted RBP15.49■□□□□ 0.07
DDR1-276ENST00000514534 ESCO1Q5FWF5 840 aa15.48■□□□□ 0.07
DDR1-276ENST00000514534 PPLO60437 1756 aa15.48■□□□□ 0.07
DDR1-276ENST00000514534 PXDNQ92626 1479 aa15.47■□□□□ 0.07
DDR1-276ENST00000514534 BLMP54132 1417 aaPredicted RBP15.46■□□□□ 0.07
DDR1-276ENST00000514534 FOXO3O43524 673 aa15.44■□□□□ 0.06
DDR1-276ENST00000514534 SF3B2Q13435 895 aaKnown RBP15.43■□□□□ 0.06
DDR1-276ENST00000514534 UNC5CLQ8IV45 518 aa15.43■□□□□ 0.06
DDR1-276ENST00000514534 GLI3P10071 1580 aa15.42■□□□□ 0.06
DDR1-276ENST00000514534 XPCQ01831 940 aaPredicted RBP15.42■□□□□ 0.06
DDR1-276ENST00000514534 BRWD3Q6RI45 1802 aa15.42■□□□□ 0.06
DDR1-276ENST00000514534 SLIT2O94813 1529 aa15.42■□□□□ 0.06
DDR1-276ENST00000514534 NAIPQ13075 1403 aa15.42■□□□□ 0.06
DDR1-276ENST00000514534 KIF1AQ12756 1690 aa15.41■□□□□ 0.06
DDR1-276ENST00000514534 RALGAPBQ86X10 1494 aa15.41■□□□□ 0.06
DDR1-276ENST00000514534 SRCAPQ6ZRS2 3230 aa15.41■□□□□ 0.06
DDR1-276ENST00000514534 PIAS4Q8N2W9 510 aaPredicted RBP15.41■□□□□ 0.06
DDR1-276ENST00000514534 EP400Q96L91 3159 aa15.4■□□□□ 0.06
DDR1-276ENST00000514534 USP32Q8NFA0 1604 aa15.4■□□□□ 0.06
DDR1-276ENST00000514534 CCDC144AA2RUR9 1427 aa15.39■□□□□ 0.05
DDR1-276ENST00000514534 TECPR2O15040 1411 aa15.39■□□□□ 0.05
DDR1-276ENST00000514534 KNDC1Q76NI1 1749 aa15.39■□□□□ 0.05
DDR1-276ENST00000514534 SPATA31A3Q5VYP0 1347 aa15.39■□□□□ 0.05
DDR1-276ENST00000514534 LRP5O75197 1615 aa15.39■□□□□ 0.05
DDR1-276ENST00000514534 FMN2Q9NZ56 1722 aa15.38■□□□□ 0.05
DDR1-276ENST00000514534 NWD2Q9ULI1 1742 aa15.37■□□□□ 0.05
DDR1-276ENST00000514534 NUTM2FA1L443 756 aa15.37■□□□□ 0.05
DDR1-276ENST00000514534 HAP1P54257 671 aaPredicted RBP15.37■□□□□ 0.05
DDR1-276ENST00000514534 RRBP1Q9P2E9 1410 aaKnown RBP15.36■□□□□ 0.05
DDR1-276ENST00000514534 DEFB132Q7Z7B7 95 aa15.36■□□□□ 0.05
DDR1-276ENST00000514534 SEPT12Q8IYM1 358 aa15.36■□□□□ 0.05
DDR1-276ENST00000514534 SLC4A1APQ9BWU0 796 aaKnown RBP15.36■□□□□ 0.05
DDR1-276ENST00000514534 STK26Q9P289 416 aa15.35■□□□□ 0.05
DDR1-276ENST00000514534 ABCC11Q96J66 1382 aa15.35■□□□□ 0.05
DDR1-276ENST00000514534 PLCH1Q4KWH8 1693 aa15.35■□□□□ 0.05
DDR1-276ENST00000514534 PSME1Q06323 249 aa15.34■□□□□ 0.05
DDR1-276ENST00000514534 VPS72Q15906 364 aa15.34■□□□□ 0.05
DDR1-276ENST00000514534 KRT28Q7Z3Y7 464 aa15.34■□□□□ 0.05
DDR1-276ENST00000514534 WAPLQ7Z5K2 1190 aa15.34■□□□□ 0.05
DDR1-276ENST00000514534 ANKRD30BQ9BXX2 1392 aa15.34■□□□□ 0.05
DDR1-276ENST00000514534 IFT172Q9UG01 1749 aa15.34■□□□□ 0.05
DDR1-276ENST00000514534 TNS3Q68CZ2 1445 aa15.34■□□□□ 0.05
DDR1-276ENST00000514534 KRT27Q7Z3Y8 459 aa15.33■□□□□ 0.04
DDR1-276ENST00000514534 CCDC9Q9Y3X0 531 aaKnown RBP15.33■□□□□ 0.04
DDR1-276ENST00000514534 ADGRF5Q8IZF2 1346 aa15.33■□□□□ 0.04
DDR1-276ENST00000514534 RGPD8O14715 1765 aaPredicted RBP15.32■□□□□ 0.04
DDR1-276ENST00000514534 ONECUT3O60422 494 aaPredicted RBP15.32■□□□□ 0.04
DDR1-276ENST00000514534 BAG6P46379 1132 aa15.32■□□□□ 0.04
DDR1-276ENST00000514534 PPARGC1BQ86YN6 1023 aaKnown RBP15.32■□□□□ 0.04
DDR1-276ENST00000514534 PLEKHH1Q9ULM0 1364 aa15.31■□□□□ 0.04
DDR1-276ENST00000514534 ABCA3Q99758 1704 aa15.31■□□□□ 0.04
DDR1-276ENST00000514534 PHF8Q9UPP1 1060 aa15.3■□□□□ 0.04
DDR1-276ENST00000514534 YTHDC2Q9H6S0 1430 aaKnown RBP15.29■□□□□ 0.04
DDR1-276ENST00000514534 SBNO1A3KN83 1393 aa15.29■□□□□ 0.04
DDR1-276ENST00000514534 ARHGEF10O15013 1369 aa15.29■□□□□ 0.04
DDR1-276ENST00000514534 MSH5O43196 834 aa15.29■□□□□ 0.04
DDR1-276ENST00000514534 RGL3Q3MIN7 710 aa15.29■□□□□ 0.04
DDR1-276ENST00000514534 SIRT1Q96EB6 747 aa15.29■□□□□ 0.04
DDR1-276ENST00000514534 PIK3C2GO75747 1445 aa15.28■□□□□ 0.04
DDR1-276ENST00000514534 A0A0G2JS52 829 aa15.28■□□□□ 0.04
DDR1-276ENST00000514534 MYT1Q01538 1121 aa15.28■□□□□ 0.04
DDR1-276ENST00000514534 TMEM132EQ6IEE7 984 aa15.28■□□□□ 0.04
DDR1-276ENST00000514534 NRXN1Q9ULB1 1477 aa15.27■□□□□ 0.04
DDR1-276ENST00000514534 SPATA31E1Q6ZUB1 1445 aa15.27■□□□□ 0.04
DDR1-276ENST00000514534 RGPD1P0DJD0 1748 aa15.27■□□□□ 0.04
DDR1-276ENST00000514534 LMOD2Q6P5Q4 547 aa15.27■□□□□ 0.04
DDR1-276ENST00000514534 CABLES1Q8TDN4 633 aa15.27■□□□□ 0.04
DDR1-276ENST00000514534 NRAPQ86VF7 1730 aa15.26■□□□□ 0.03
DDR1-276ENST00000514534 PSDA5PKW4 1024 aaPredicted RBP15.25■□□□□ 0.03
DDR1-276ENST00000514534 HRCP23327 699 aa15.25■□□□□ 0.03
DDR1-276ENST00000514534 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
DDR1-276ENST00000514534 DHX57Q6P158 1386 aaKnown RBP15.24■□□□□ 0.03
DDR1-276ENST00000514534 COL14A1Q05707 1796 aaKnown RBP15.23■□□□□ 0.03
DDR1-276ENST00000514534 FAM83GA6ND36 823 aa15.22■□□□□ 0.03
DDR1-276ENST00000514534 FAM98CQ17RN3 349 aaKnown RBP15.22■□□□□ 0.03
DDR1-276ENST00000514534 ANKARQ7Z5J8 1434 aa15.21■□□□□ 0.03
DDR1-276ENST00000514534 C14orf93Q9H972 538 aaKnown RBP15.21■□□□□ 0.03
DDR1-276ENST00000514534 BTG4Q9NY30 223 aa15.21■□□□□ 0.03
DDR1-276ENST00000514534 EN1Q05925 392 aaPredicted RBP15.2■□□□□ 0.02
DDR1-276ENST00000514534 TRPM3Q9HCF6 1732 aaPredicted RBP15.2■□□□□ 0.02
DDR1-276ENST00000514534 DISP2A7MBM2 1401 aa15.19■□□□□ 0.02
DDR1-276ENST00000514534 PMFBP1Q8TBY8 1022 aa15.19■□□□□ 0.02
DDR1-276ENST00000514534 ADGRB2O60241 1585 aa15.19■□□□□ 0.02
DDR1-276ENST00000514534 ALS2Q96Q42 1657 aa15.19■□□□□ 0.02
DDR1-276ENST00000514534 DLC1Q96QB1 1528 aa15.18■□□□□ 0.02
DDR1-276ENST00000514534 TNS1Q9HBL0 1735 aaKnown RBP15.18■□□□□ 0.02
DDR1-276ENST00000514534 PRAM1Q96QH2 718 aa15.18■□□□□ 0.02
DDR1-276ENST00000514534 MPHOSPH9Q99550 1183 aa15.18■□□□□ 0.02
DDR1-276ENST00000514534 POGKQ9P215 609 aa15.18■□□□□ 0.02
DDR1-276ENST00000514534 GPRASP1Q5JY77 1395 aa15.18■□□□□ 0.02
DDR1-276ENST00000514534 EIF3AQ14152 1382 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms