RNA–Protein interactions for RNA: ENST00000514488.1

MATR3-224, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-224ENST00000514488 DHX29Q7Z478 1369 aaKnown RBP13.93□□□□□ -0.18
MATR3-224ENST00000514488 XIRP1Q702N8 1843 aaKnown RBP13.92□□□□□ -0.18
MATR3-224ENST00000514488 SYNMO15061 1565 aa13.92□□□□□ -0.18
MATR3-224ENST00000514488 FAM135AQ9P2D6 1515 aa13.91□□□□□ -0.18
MATR3-224ENST00000514488 THEMISQ8N1K5 641 aaPredicted RBP13.91□□□□□ -0.18
MATR3-224ENST00000514488 NLRP1Q9C000 1473 aa13.91□□□□□ -0.18
MATR3-224ENST00000514488 WASHC2CQ9Y4E1 1318 aa13.9□□□□□ -0.18
MATR3-224ENST00000514488 MIA2Q96PC5 1412 aa13.9□□□□□ -0.18
MATR3-224ENST00000514488 HOXB3P14651 431 aaPredicted RBP13.9□□□□□ -0.18
MATR3-224ENST00000514488 MTUS2Q5JR59 1369 aa13.9□□□□□ -0.18
MATR3-224ENST00000514488 ZC3H13Q5T200 1668 aaKnown RBP13.9□□□□□ -0.18
MATR3-224ENST00000514488 RTEL1-TNFRSF6BF6WH68 1400 aa13.9□□□□□ -0.19
MATR3-224ENST00000514488 DOK7Q18PE1 504 aa13.88□□□□□ -0.19
MATR3-224ENST00000514488 SETD1AO15047 1707 aaKnown RBP13.87□□□□□ -0.19
MATR3-224ENST00000514488 KIF3CO14782 793 aa13.87□□□□□ -0.19
MATR3-224ENST00000514488 GTPBP6O43824 516 aaPredicted RBP13.86□□□□□ -0.19
MATR3-224ENST00000514488 CCDC141Q6ZP82 1450 aa13.86□□□□□ -0.19
MATR3-224ENST00000514488 EHBP1L1Q8N3D4 1523 aa13.85□□□□□ -0.19
MATR3-224ENST00000514488 UBR1Q8IWV7 1749 aa13.85□□□□□ -0.19
MATR3-224ENST00000514488 CAMSAP2Q08AD1 1489 aa13.85□□□□□ -0.19
MATR3-224ENST00000514488 C2orf72A6NCS6 295 aa13.84□□□□□ -0.19
MATR3-224ENST00000514488 CEP152O94986 1710 aa13.84□□□□□ -0.19
MATR3-224ENST00000514488 POTEAQ6S8J7 498 aa13.83□□□□□ -0.2
MATR3-224ENST00000514488 TMC2Q8TDI7 906 aa13.83□□□□□ -0.2
MATR3-224ENST00000514488 ABCC3O15438 1527 aa13.83□□□□□ -0.2
MATR3-224ENST00000514488 RIMBP2O15034 1052 aa13.82□□□□□ -0.2
MATR3-224ENST00000514488 ZNF710Q8N1W2 664 aa13.82□□□□□ -0.2
MATR3-224ENST00000514488 ERVK-7P63135 1459 aa13.81□□□□□ -0.2
MATR3-224ENST00000514488 CEP162Q5TB80 1403 aa13.81□□□□□ -0.2
MATR3-224ENST00000514488 SCAF11Q99590 1463 aaKnown RBP13.8□□□□□ -0.2
MATR3-224ENST00000514488 BBXQ8WY36 941 aaPredicted RBP13.8□□□□□ -0.2
MATR3-224ENST00000514488 ZSWIM6Q9HCJ5 1215 aa13.79□□□□□ -0.2
MATR3-224ENST00000514488 PCDH10Q9P2E7 1040 aa13.79□□□□□ -0.2
MATR3-224ENST00000514488 NCOA2Q15596 1464 aa13.79□□□□□ -0.2
MATR3-224ENST00000514488 ROBO1Q9Y6N7 1651 aa13.79□□□□□ -0.2
MATR3-224ENST00000514488 LTKP29376 864 aa13.78□□□□□ -0.2
MATR3-224ENST00000514488 ARHGEF5Q12774 1597 aa13.78□□□□□ -0.2
MATR3-224ENST00000514488 MROH1Q8NDA8 1641 aa13.78□□□□□ -0.2
MATR3-224ENST00000514488 HOXB1P14653 301 aaPredicted RBP13.77□□□□□ -0.21
MATR3-224ENST00000514488 MARVELD3Q96A59 401 aa13.77□□□□□ -0.21
MATR3-224ENST00000514488 EMP3P54852 163 aa13.75□□□□□ -0.21
MATR3-224ENST00000514488 TXNDC2Q86VQ3 553 aa13.75□□□□□ -0.21
MATR3-224ENST00000514488 EIF2AK4Q9P2K8 1649 aaKnown RBP13.75□□□□□ -0.21
MATR3-224ENST00000514488 SLIT1O75093 1534 aa13.74□□□□□ -0.21
MATR3-224ENST00000514488 ARHGAP23Q9P227 1491 aa13.74□□□□□ -0.21
MATR3-224ENST00000514488 FAM135BQ49AJ0 1406 aa13.74□□□□□ -0.21
MATR3-224ENST00000514488 RBM33Q96EV2 1170 aaKnown RBP13.74□□□□□ -0.21
MATR3-224ENST00000514488 PIK3C2BO00750 1634 aa13.74□□□□□ -0.21
MATR3-224ENST00000514488 TSPY4P0CV99 314 aa13.73□□□□□ -0.21
MATR3-224ENST00000514488 TSPY10P0CW01 314 aa13.73□□□□□ -0.21
MATR3-224ENST00000514488 RSPH4AQ5TD94 716 aa13.73□□□□□ -0.21
MATR3-224ENST00000514488 GPHNQ9NQX3 736 aaPredicted RBP13.73□□□□□ -0.21
MATR3-224ENST00000514488 TMEM94Q12767 1356 aa13.72□□□□□ -0.21
MATR3-224ENST00000514488 MAST1Q9Y2H9 1570 aa13.72□□□□□ -0.21
MATR3-224ENST00000514488 MAP3K1Q13233 1512 aa13.72□□□□□ -0.21
MATR3-224ENST00000514488 PHLPP1O60346 1717 aa13.72□□□□□ -0.21
MATR3-224ENST00000514488 FOXK1P85037 733 aa13.7□□□□□ -0.22
MATR3-224ENST00000514488 GPR153Q6NV75 609 aa13.7□□□□□ -0.22
MATR3-224ENST00000514488 SRCAPQ6ZRS2 3230 aa13.69□□□□□ -0.22
MATR3-224ENST00000514488 SLC34A2O95436 690 aa13.69□□□□□ -0.22
MATR3-224ENST00000514488 EID1Q9Y6B2 187 aa13.69□□□□□ -0.22
MATR3-224ENST00000514488 CRISPLD2Q9H0B8 497 aa13.68□□□□□ -0.22
MATR3-224ENST00000514488 CDAN1Q8IWY9 1227 aa13.67□□□□□ -0.22
MATR3-224ENST00000514488 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.67□□□□□ -0.22
MATR3-224ENST00000514488 TMEM2Q9UHN6 1383 aa13.67□□□□□ -0.22
MATR3-224ENST00000514488 PROSER2Q86WR7 435 aaPredicted RBP13.66□□□□□ -0.22
MATR3-224ENST00000514488 SLC26A8Q96RN1 970 aa13.66□□□□□ -0.22
MATR3-224ENST00000514488 LRRC9Q6ZRR7 1453 aa13.66□□□□□ -0.22
MATR3-224ENST00000514488 PRDM15P57071 1507 aaPredicted RBP13.65□□□□□ -0.22
MATR3-224ENST00000514488 TET3O43151 1660 aa13.65□□□□□ -0.22
MATR3-224ENST00000514488 EFCAB6Q5THR3 1501 aa13.64□□□□□ -0.23
MATR3-224ENST00000514488 DUOX2Q9NRD8 1548 aa13.64□□□□□ -0.23
MATR3-224ENST00000514488 FAM205CA6NFA0 338 aa13.64□□□□□ -0.23
MATR3-224ENST00000514488 KCNA6P17658 529 aa13.64□□□□□ -0.23
MATR3-224ENST00000514488 DSG2Q14126 1118 aa13.64□□□□□ -0.23
MATR3-224ENST00000514488 PLPP6Q8IY26 295 aa13.64□□□□□ -0.23
MATR3-224ENST00000514488 HS3ST6Q96QI5 342 aa13.64□□□□□ -0.23
MATR3-224ENST00000514488 COL16A1Q07092 1604 aaPredicted RBP13.64□□□□□ -0.23
MATR3-224ENST00000514488 KDM5AP29375 1690 aaKnown RBP13.63□□□□□ -0.23
MATR3-224ENST00000514488 NWD1Q149M9 1564 aa13.63□□□□□ -0.23
MATR3-224ENST00000514488 PDE4AP27815 886 aa13.63□□□□□ -0.23
MATR3-224ENST00000514488 ARSIQ5FYB1 569 aa13.63□□□□□ -0.23
MATR3-224ENST00000514488 TRIM52Q96A61 297 aa13.63□□□□□ -0.23
MATR3-224ENST00000514488 LRP6O75581 1613 aa13.63□□□□□ -0.23
MATR3-224ENST00000514488 ARHGAP31Q2M1Z3 1444 aa13.63□□□□□ -0.23
MATR3-224ENST00000514488 JCADQ9P266 1359 aa13.62□□□□□ -0.23
MATR3-224ENST00000514488 SPRYD3Q8NCJ5 442 aa13.62□□□□□ -0.23
MATR3-224ENST00000514488 UPF1Q92900 1129 aaKnown RBP eCLIP13.62□□□□□ -0.23
MATR3-224ENST00000514488 MYO5BQ9ULV0 1848 aa13.62□□□□□ -0.23
MATR3-224ENST00000514488 MSH6P52701 1360 aa13.61□□□□□ -0.23
MATR3-224ENST00000514488 CROCC2H7BZ55 1655 aa13.61□□□□□ -0.23
MATR3-224ENST00000514488 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
MATR3-224ENST00000514488 CHD2O14647 1828 aaKnown RBP13.6□□□□□ -0.23
MATR3-224ENST00000514488 IDI1Q13907 227 aa13.6□□□□□ -0.23
MATR3-224ENST00000514488 SLAIN2Q9P270 581 aa13.6□□□□□ -0.23
MATR3-224ENST00000514488 ERBB3P21860 1342 aa13.6□□□□□ -0.23
MATR3-224ENST00000514488 KIF15Q9NS87 1388 aa13.59□□□□□ -0.23
MATR3-224ENST00000514488 POTEB3A0JP26 581 aa13.59□□□□□ -0.23
MATR3-224ENST00000514488 POTEBQ6S5H4 581 aa13.59□□□□□ -0.23
MATR3-224ENST00000514488 PCDHGA4Q9Y5G9 962 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms