RNA–Protein interactions for RNA: ENST00000514292.5

PACRGL-230, Transcript of parkin coregulated like, humanhuman

TSL 4

Gene PACRGL, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-230ENST00000514292 SLAIN2Q9P270 581 aa25.45■■□□□ 1.66
PACRGL-230ENST00000514292 ROCK2O75116 1388 aaKnown RBP25.44■■□□□ 1.66
PACRGL-230ENST00000514292 PLEKHH1Q9ULM0 1364 aa25.44■■□□□ 1.66
PACRGL-230ENST00000514292 NALCNQ8IZF0 1738 aa25.42■■□□□ 1.66
PACRGL-230ENST00000514292 RALGAPBQ86X10 1494 aa25.41■■□□□ 1.66
PACRGL-230ENST00000514292 ILDR1Q86SU0 546 aaPredicted RBP25.41■■□□□ 1.66
PACRGL-230ENST00000514292 PIP4K2BP78356 416 aa25.38■■□□□ 1.65
PACRGL-230ENST00000514292 ARHGEF28Q8N1W1 1705 aaKnown RBP25.37■■□□□ 1.65
PACRGL-230ENST00000514292 CDC42BPGQ6DT37 1551 aa25.36■■□□□ 1.65
PACRGL-230ENST00000514292 CARD11Q9BXL7 1154 aa25.36■■□□□ 1.65
PACRGL-230ENST00000514292 MST1RQ04912 1400 aa25.35■■□□□ 1.65
PACRGL-230ENST00000514292 SAFB2Q14151 953 aaKnown RBP eCLIP25.34■■□□□ 1.65
PACRGL-230ENST00000514292 SCAF1Q9H7N4 1312 aaKnown RBP25.34■■□□□ 1.65
PACRGL-230ENST00000514292 CENPJQ9HC77 1338 aaPredicted RBP25.33■■□□□ 1.64
PACRGL-230ENST00000514292 EIF3AQ14152 1382 aaKnown RBP25.32■■□□□ 1.64
PACRGL-230ENST00000514292 ADGRB2O60241 1585 aa25.31■■□□□ 1.64
PACRGL-230ENST00000514292 C1orf167Q5SNV9 1468 aa25.29■■□□□ 1.64
PACRGL-230ENST00000514292 MINK1Q8N4C8 1332 aaPredicted RBP25.29■■□□□ 1.64
PACRGL-230ENST00000514292 WASLO00401 505 aaPredicted RBP25.28■■□□□ 1.64
PACRGL-230ENST00000514292 BRINP3Q76B58 766 aa25.27■■□□□ 1.64
PACRGL-230ENST00000514292 ROBO1Q9Y6N7 1651 aa25.26■■□□□ 1.63
PACRGL-230ENST00000514292 HIRIP3Q9BW71 556 aaPredicted RBP25.25■■□□□ 1.63
PACRGL-230ENST00000514292 FMN2Q9NZ56 1722 aa25.25■■□□□ 1.63
PACRGL-230ENST00000514292 ANKARQ7Z5J8 1434 aa25.23■■□□□ 1.63
PACRGL-230ENST00000514292 SBNO2Q9Y2G9 1366 aa25.23■■□□□ 1.63
PACRGL-230ENST00000514292 SLC24A1O60721 1099 aa25.23■■□□□ 1.63
PACRGL-230ENST00000514292 HSPA1LP34931 641 aa25.22■■□□□ 1.63
PACRGL-230ENST00000514292 ORAI2Q96SN7 254 aa25.21■■□□□ 1.63
PACRGL-230ENST00000514292 CDK19Q9BWU1 502 aa25.21■■□□□ 1.63
PACRGL-230ENST00000514292 ESCO1Q5FWF5 840 aa25.2■■□□□ 1.62
PACRGL-230ENST00000514292 QRICH2Q9H0J4 1663 aa25.2■■□□□ 1.62
PACRGL-230ENST00000514292 EVC2Q86UK5 1308 aa25.18■■□□□ 1.62
PACRGL-230ENST00000514292 TULP4Q9NRJ4 1543 aa25.18■■□□□ 1.62
PACRGL-230ENST00000514292 AHDC1Q5TGY3 1603 aaPredicted RBP25.17■■□□□ 1.62
PACRGL-230ENST00000514292 NUTM2FA1L443 756 aa25.17■■□□□ 1.62
PACRGL-230ENST00000514292 ST20-MTHFSA0A0A6YYL1 179 aa25.15■■□□□ 1.62
PACRGL-230ENST00000514292 NUDT16Q96DE0 195 aaKnown RBP25.15■■□□□ 1.62
PACRGL-230ENST00000514292 USP47Q96K76 1375 aa25.15■■□□□ 1.62
PACRGL-230ENST00000514292 PHF8Q9UPP1 1060 aa25.14■■□□□ 1.62
PACRGL-230ENST00000514292 CCDC61Q9Y6R9 512 aa25.14■■□□□ 1.62
PACRGL-230ENST00000514292 NPHP3Q7Z494 1330 aa25.13■■□□□ 1.61
PACRGL-230ENST00000514292 PRR36Q9H6K5 1346 aa25.13■■□□□ 1.61
PACRGL-230ENST00000514292 PUS7Q96PZ0 661 aaKnown RBP25.13■■□□□ 1.61
PACRGL-230ENST00000514292 NHSL1Q5SYE7 1610 aa25.12■■□□□ 1.61
PACRGL-230ENST00000514292 USP32Q8NFA0 1604 aa25.12■■□□□ 1.61
PACRGL-230ENST00000514292 TESK2Q96S53 571 aa25.12■■□□□ 1.61
PACRGL-230ENST00000514292 SRPK2P78362 688 aaKnown RBP25.11■■□□□ 1.61
PACRGL-230ENST00000514292 SOS2Q07890 1332 aaPredicted RBP25.11■■□□□ 1.61
PACRGL-230ENST00000514292 RGPD8O14715 1765 aaPredicted RBP25.1■■□□□ 1.61
PACRGL-230ENST00000514292 KIF1AQ12756 1690 aa25.1■■□□□ 1.61
PACRGL-230ENST00000514292 ATP7BP35670 1465 aa25.1■■□□□ 1.61
PACRGL-230ENST00000514292 PHLPP1O60346 1717 aa25.1■■□□□ 1.61
PACRGL-230ENST00000514292 FOXO3O43524 673 aa25.1■■□□□ 1.61
PACRGL-230ENST00000514292 LRRC59Q96AG4 307 aaKnown RBP25.09■■□□□ 1.61
PACRGL-230ENST00000514292 PLEKHG3A1L390 1219 aa25.08■■□□□ 1.61
PACRGL-230ENST00000514292 CABP2Q9NPB3 220 aa25.08■■□□□ 1.61
PACRGL-230ENST00000514292 EIF4G2P78344 907 aaKnown RBP eCLIP25.07■■□□□ 1.6
PACRGL-230ENST00000514292 COL16A1Q07092 1604 aaPredicted RBP25.07■■□□□ 1.6
PACRGL-230ENST00000514292 ITSN1Q15811 1721 aa25.06■■□□□ 1.6
PACRGL-230ENST00000514292 DDX17Q92841 729 aaKnown RBP25.05■■□□□ 1.6
PACRGL-230ENST00000514292 PSME1Q06323 249 aa25.04■■□□□ 1.6
PACRGL-230ENST00000514292 PMFBP1Q8TBY8 1022 aa25.04■■□□□ 1.6
PACRGL-230ENST00000514292 ATAD2Q6PL18 1390 aa25.04■■□□□ 1.6
PACRGL-230ENST00000514292 JCADQ9P266 1359 aa25.04■■□□□ 1.6
PACRGL-230ENST00000514292 POLR3AO14802 1390 aaPredicted RBP25.03■■□□□ 1.6
PACRGL-230ENST00000514292 PXDNQ92626 1479 aa25.02■■□□□ 1.6
PACRGL-230ENST00000514292 TMF1P82094 1093 aa25.02■■□□□ 1.6
PACRGL-230ENST00000514292 KRT28Q7Z3Y7 464 aa25.02■■□□□ 1.6
PACRGL-230ENST00000514292 NGDNQ8NEJ9 315 aaKnown RBP25.02■■□□□ 1.6
PACRGL-230ENST00000514292 TOPAZ1Q8N9V7 1692 aa25.01■■□□□ 1.59
PACRGL-230ENST00000514292 CDCA8Q53HL2 280 aa25■■□□□ 1.59
PACRGL-230ENST00000514292 PPIP5K1Q6PFW1 1433 aa25■■□□□ 1.59
PACRGL-230ENST00000514292 CABP1Q9NZU7 370 aa24.99■■□□□ 1.59
PACRGL-230ENST00000514292 SBNO1A3KN83 1393 aa24.98■■□□□ 1.59
PACRGL-230ENST00000514292 ACEP12821 1306 aa24.98■■□□□ 1.59
PACRGL-230ENST00000514292 HSPA5P11021 654 aaKnown RBP24.98■■□□□ 1.59
PACRGL-230ENST00000514292 ZNF692Q9BU19 519 aaPredicted RBP24.96■■□□□ 1.59
PACRGL-230ENST00000514292 BRD4O60885 1362 aaPredicted RBP24.95■■□□□ 1.59
PACRGL-230ENST00000514292 SPATA31A6Q5VVP1 1343 aa24.95■■□□□ 1.58
PACRGL-230ENST00000514292 SPATA31A3Q5VYP0 1347 aa24.95■■□□□ 1.58
PACRGL-230ENST00000514292 XPCQ01831 940 aaPredicted RBP24.95■■□□□ 1.58
PACRGL-230ENST00000514292 SHPRHQ149N8 1683 aa24.94■■□□□ 1.58
PACRGL-230ENST00000514292 NINLQ9Y2I6 1382 aa24.93■■□□□ 1.58
PACRGL-230ENST00000514292 ZEB1P37275 1124 aaPredicted RBP24.93■■□□□ 1.58
PACRGL-230ENST00000514292 PNPLA6Q8IY17 1366 aa24.93■■□□□ 1.58
PACRGL-230ENST00000514292 DISP3Q9P2K9 1392 aa24.93■■□□□ 1.58
PACRGL-230ENST00000514292 ARHGEF10O15013 1369 aa24.9■■□□□ 1.58
PACRGL-230ENST00000514292 CPSF1Q10570 1443 aaKnown RBP24.89■■□□□ 1.58
PACRGL-230ENST00000514292 TNS3Q68CZ2 1445 aa24.89■■□□□ 1.58
PACRGL-230ENST00000514292 TRPM3Q9HCF6 1732 aaPredicted RBP24.87■■□□□ 1.57
PACRGL-230ENST00000514292 SLC12A5Q9H2X9 1139 aa24.87■■□□□ 1.57
PACRGL-230ENST00000514292 COL22A1Q8NFW1 1626 aaPredicted RBP24.86■■□□□ 1.57
PACRGL-230ENST00000514292 TMC1Q8TDI8 760 aa24.86■■□□□ 1.57
PACRGL-230ENST00000514292 TERF2IPQ9NYB0 399 aa24.86■■□□□ 1.57
PACRGL-230ENST00000514292 USP6P35125 1406 aa24.86■■□□□ 1.57
PACRGL-230ENST00000514292 HDGFL2Q7Z4V5 671 aaPredicted RBP24.84■■□□□ 1.57
PACRGL-230ENST00000514292 SSH2Q76I76 1423 aa24.84■■□□□ 1.57
PACRGL-230ENST00000514292 PAK3O75914 559 aaPredicted RBP24.83■■□□□ 1.57
PACRGL-230ENST00000514292 ALS2Q96Q42 1657 aa24.82■■□□□ 1.56
PACRGL-230ENST00000514292 CD163L1Q9NR16 1453 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms