RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TONSLQ96HA7 1378 aa10.13□□□□□ -0.79
CLIP1-205ENST00000514271 USP32Q8NFA0 1604 aa10.13□□□□□ -0.79
CLIP1-205ENST00000514271 ANP32CO43423 234 aa10.13□□□□□ -0.79
CLIP1-205ENST00000514271 PAK3O75914 559 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-205ENST00000514271 SETD1AO15047 1707 aaKnown RBP10.11□□□□□ -0.79
CLIP1-205ENST00000514271 CHD2O14647 1828 aaKnown RBP10.11□□□□□ -0.79
CLIP1-205ENST00000514271 TBX22Q9Y458 520 aa10.1□□□□□ -0.79
CLIP1-205ENST00000514271 NRXN3Q9Y4C0 1643 aa10.1□□□□□ -0.79
CLIP1-205ENST00000514271 XRN1Q8IZH2 1706 aaKnown RBP10.09□□□□□ -0.79
CLIP1-205ENST00000514271 DLC1Q96QB1 1528 aa10.08□□□□□ -0.8
CLIP1-205ENST00000514271 PDIA4P13667 645 aaKnown RBP10.08□□□□□ -0.8
CLIP1-205ENST00000514271 TXNDC2Q86VQ3 553 aa10.08□□□□□ -0.8
CLIP1-205ENST00000514271 PIK3C2GO75747 1445 aa10.08□□□□□ -0.8
CLIP1-205ENST00000514271 PNISRQ8TF01 805 aaKnown RBP10.07□□□□□ -0.8
CLIP1-205ENST00000514271 ALKQ9UM73 1620 aa10.07□□□□□ -0.8
CLIP1-205ENST00000514271 HAP1P54257 671 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-205ENST00000514271 UBE2Q2Q8WVN8 375 aa10.06□□□□□ -0.8
CLIP1-205ENST00000514271 SIRT1Q96EB6 747 aa10.06□□□□□ -0.8
CLIP1-205ENST00000514271 PTCH1Q13635 1447 aa10.06□□□□□ -0.8
CLIP1-205ENST00000514271 TECPR2O15040 1411 aa10.06□□□□□ -0.8
CLIP1-205ENST00000514271 BRD4O60885 1362 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-205ENST00000514271 TMEM132AQ24JP5 1023 aa10.06□□□□□ -0.8
CLIP1-205ENST00000514271 LTBP4Q8N2S1 1624 aa10.06□□□□□ -0.8
CLIP1-205ENST00000514271 KDM2BQ8NHM5 1336 aa10.06□□□□□ -0.8
CLIP1-205ENST00000514271 DEKP35659 375 aaKnown RBP10.05□□□□□ -0.8
CLIP1-205ENST00000514271 ADAMTS13Q76LX8 1427 aa10.05□□□□□ -0.8
CLIP1-205ENST00000514271 ZNF326Q5BKZ1 582 aaKnown RBP10.05□□□□□ -0.8
CLIP1-205ENST00000514271 L3MBTL2Q969R5 705 aa10.05□□□□□ -0.8
CLIP1-205ENST00000514271 DCCP43146 1447 aa10.04□□□□□ -0.8
CLIP1-205ENST00000514271 ROCK2O75116 1388 aaKnown RBP10.04□□□□□ -0.8
CLIP1-205ENST00000514271 NUDCQ9Y266 331 aa10.03□□□□□ -0.8
CLIP1-205ENST00000514271 CHGAP10645 457 aaKnown RBP10.03□□□□□ -0.8
CLIP1-205ENST00000514271 ZNF521Q96K83 1311 aa10.03□□□□□ -0.8
CLIP1-205ENST00000514271 FAM135BQ49AJ0 1406 aa10.03□□□□□ -0.8
CLIP1-205ENST00000514271 KCNA6P17658 529 aa10.03□□□□□ -0.8
CLIP1-205ENST00000514271 IPO9Q96P70 1041 aaKnown RBP10.03□□□□□ -0.8
CLIP1-205ENST00000514271 HIRIP3Q9BW71 556 aaPredicted RBP10.02□□□□□ -0.8
CLIP1-205ENST00000514271 FBXO3Q9UK99 471 aa10.02□□□□□ -0.8
CLIP1-205ENST00000514271 NOP58Q9Y2X3 529 aaKnown RBP10.02□□□□□ -0.8
CLIP1-205ENST00000514271 NCKAP5LQ9HCH0 1330 aa10.02□□□□□ -0.8
CLIP1-205ENST00000514271 LTKP29376 864 aa10.01□□□□□ -0.81
CLIP1-205ENST00000514271 PER1O15534 1290 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-205ENST00000514271 HSPA2P54652 639 aa10.01□□□□□ -0.81
CLIP1-205ENST00000514271 ADGRB2O60241 1585 aa10.01□□□□□ -0.81
CLIP1-205ENST00000514271 EIF3AQ14152 1382 aaKnown RBP10.01□□□□□ -0.81
CLIP1-205ENST00000514271 ABCC11Q96J66 1382 aa10□□□□□ -0.81
CLIP1-205ENST00000514271 TUBGCP6Q96RT7 1819 aa10□□□□□ -0.81
CLIP1-205ENST00000514271 C14orf93Q9H972 538 aaKnown RBP10□□□□□ -0.81
CLIP1-205ENST00000514271 ADGRB1O14514 1584 aa9.99□□□□□ -0.81
CLIP1-205ENST00000514271 EIF4G2P78344 907 aaKnown RBP eCLIP9.99□□□□□ -0.81
CLIP1-205ENST00000514271 MAPK8IP2Q13387 824 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-205ENST00000514271 ANKRD26Q9UPS8 1709 aa9.99□□□□□ -0.81
CLIP1-205ENST00000514271 STRCP1A6NGW2 1772 aa9.99□□□□□ -0.81
CLIP1-205ENST00000514271 USP47Q96K76 1375 aa9.99□□□□□ -0.81
CLIP1-205ENST00000514271 CDC42BPGQ6DT37 1551 aa9.98□□□□□ -0.81
CLIP1-205ENST00000514271 HNRNPUQ00839 825 aaKnown RBP eCLIP9.98□□□□□ -0.81
CLIP1-205ENST00000514271 USP35Q9P2H5 1018 aa9.98□□□□□ -0.81
CLIP1-205ENST00000514271 LRRC7Q96NW7 1537 aa9.98□□□□□ -0.81
CLIP1-205ENST00000514271 MS4A1P11836 297 aa9.97□□□□□ -0.81
CLIP1-205ENST00000514271 BACH2Q9BYV9 841 aa9.97□□□□□ -0.81
CLIP1-205ENST00000514271 ASXL1Q8IXJ9 1541 aa9.97□□□□□ -0.81
CLIP1-205ENST00000514271 ARHGEF28Q8N1W1 1705 aaKnown RBP9.97□□□□□ -0.81
CLIP1-205ENST00000514271 XIRP1Q702N8 1843 aaKnown RBP9.97□□□□□ -0.81
CLIP1-205ENST00000514271 YTHDC2Q9H6S0 1430 aaKnown RBP9.96□□□□□ -0.81
CLIP1-205ENST00000514271 TRMT2AQ8IZ69 625 aaKnown RBP9.96□□□□□ -0.81
CLIP1-205ENST00000514271 ADGRL3Q9HAR2 1447 aa9.95□□□□□ -0.82
CLIP1-205ENST00000514271 CHMP4AQ9BY43 222 aa9.95□□□□□ -0.82
CLIP1-205ENST00000514271 ITSN1Q15811 1721 aa9.94□□□□□ -0.82
CLIP1-205ENST00000514271 KIF1AQ12756 1690 aa9.94□□□□□ -0.82
CLIP1-205ENST00000514271 SBNO2Q9Y2G9 1366 aa9.94□□□□□ -0.82
CLIP1-205ENST00000514271 NEFLP07196 543 aa9.94□□□□□ -0.82
CLIP1-205ENST00000514271 B4GALNT3Q6L9W6 998 aa9.94□□□□□ -0.82
CLIP1-205ENST00000514271 DCAF11Q8TEB1 546 aa9.94□□□□□ -0.82
CLIP1-205ENST00000514271 ADGRF5Q8IZF2 1346 aa9.94□□□□□ -0.82
CLIP1-205ENST00000514271 MSH6P52701 1360 aa9.93□□□□□ -0.82
CLIP1-205ENST00000514271 FMN2Q9NZ56 1722 aa9.93□□□□□ -0.82
CLIP1-205ENST00000514271 CERKQ8TCT0 537 aa9.92□□□□□ -0.82
CLIP1-205ENST00000514271 USP19O94966 1318 aa9.92□□□□□ -0.82
CLIP1-205ENST00000514271 NPC1L1Q9UHC9 1359 aa9.92□□□□□ -0.82
CLIP1-205ENST00000514271 ANKARQ7Z5J8 1434 aa9.92□□□□□ -0.82
CLIP1-205ENST00000514271 PTPRUQ92729 1446 aa9.92□□□□□ -0.82
CLIP1-205ENST00000514271 RGL3Q3MIN7 710 aa9.92□□□□□ -0.82
CLIP1-205ENST00000514271 NALCNQ8IZF0 1738 aa9.92□□□□□ -0.82
CLIP1-205ENST00000514271 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.91□□□□□ -0.82
CLIP1-205ENST00000514271 PUS7Q96PZ0 661 aaKnown RBP9.91□□□□□ -0.82
CLIP1-205ENST00000514271 METP08581 1390 aa9.91□□□□□ -0.82
CLIP1-205ENST00000514271 PDE4CQ08493 712 aa9.9□□□□□ -0.82
CLIP1-205ENST00000514271 AMOTL2Q9Y2J4 779 aa9.9□□□□□ -0.82
CLIP1-205ENST00000514271 QRICH2Q9H0J4 1663 aa9.9□□□□□ -0.82
CLIP1-205ENST00000514271 RRP1P56182 461 aaKnown RBP9.9□□□□□ -0.82
CLIP1-205ENST00000514271 CADPS2Q86UW7 1296 aa9.89□□□□□ -0.83
CLIP1-205ENST00000514271 PROSER2Q86WR7 435 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-205ENST00000514271 ZNF335Q9H4Z2 1342 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-205ENST00000514271 TOM1O60784 492 aa9.89□□□□□ -0.83
CLIP1-205ENST00000514271 IRX6P78412 446 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-205ENST00000514271 TESK2Q96S53 571 aa9.89□□□□□ -0.83
CLIP1-205ENST00000514271 C19orf44Q9H6X5 657 aa9.88□□□□□ -0.83
CLIP1-205ENST00000514271 TMEM94Q12767 1356 aa9.88□□□□□ -0.83
CLIP1-205ENST00000514271 MYBBP1AQ9BQG0 1328 aaKnown RBP9.88□□□□□ -0.83
CLIP1-205ENST00000514271 SLC26A8Q96RN1 970 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms