RNA–Protein interactions for RNA: ENST00000514094.5

APBB2-228, Transcript of amyloid beta precursor protein binding family B member 2, human

TSL 4

Gene APBB2, Length 856 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB2-228	ENST00000514094	BCAN	Q96GW7	911 aa		13.63	□□□□□ -0.23
APBB2-228	ENST00000514094	MKRN3	Q13064	507 aa	Known RBP	13.62	□□□□□ -0.23
APBB2-228	ENST00000514094	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.62	□□□□□ -0.23
APBB2-228	ENST00000514094	UGGT1	Q9NYU2	1555 aa		13.62	□□□□□ -0.23
APBB2-228	ENST00000514094	NCKAP5L	Q9HCH0	1330 aa		13.62	□□□□□ -0.23
APBB2-228	ENST00000514094	ERVK-7	P63135	1459 aa		13.61	□□□□□ -0.23
APBB2-228	ENST00000514094	LMTK2	Q8IWU2	1503 aa		13.61	□□□□□ -0.23
APBB2-228	ENST00000514094	ATMIN	O43313	823 aa	Predicted RBP	13.61	□□□□□ -0.23
APBB2-228	ENST00000514094	RPRD2	Q5VT52	1461 aa	Known RBP	13.61	□□□□□ -0.23
APBB2-228	ENST00000514094	DEPDC5	O75140	1603 aa		13.61	□□□□□ -0.23
APBB2-228	ENST00000514094	CLCN6	P51797	869 aa		13.6	□□□□□ -0.23
APBB2-228	ENST00000514094	RRBP1	Q9P2E9	1410 aa	Known RBP	13.6	□□□□□ -0.23
APBB2-228	ENST00000514094	MROH1	Q8NDA8	1641 aa		13.58	□□□□□ -0.24
APBB2-228	ENST00000514094	ASTL	Q6HA08	431 aa	Predicted RBP	13.58	□□□□□ -0.24
APBB2-228	ENST00000514094	MED1	Q15648	1581 aa	Predicted RBP	13.58	□□□□□ -0.24
APBB2-228	ENST00000514094	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.57	□□□□□ -0.24	3e-6	■■■■■ 27
APBB2-228	ENST00000514094	NUP155	O75694	1391 aa		13.57	□□□□□ -0.24
APBB2-228	ENST00000514094	CEP152	O94986	1710 aa		13.56	□□□□□ -0.24
APBB2-228	ENST00000514094	DPY19L2	Q6NUT2	758 aa		13.56	□□□□□ -0.24
APBB2-228	ENST00000514094	TXNDC2	Q86VQ3	553 aa		13.56	□□□□□ -0.24
APBB2-228	ENST00000514094	CFAP65	Q6ZU64	1925 aa	Known RBP	13.56	□□□□□ -0.24
APBB2-228	ENST00000514094	VWDE	Q8N2E2	1590 aa		13.55	□□□□□ -0.24
APBB2-228	ENST00000514094	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.55	□□□□□ -0.24
APBB2-228	ENST00000514094	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
APBB2-228	ENST00000514094	IDI1	Q13907	227 aa		13.53	□□□□□ -0.24
APBB2-228	ENST00000514094	PELP1	Q8IZL8	1130 aa	Known RBP	13.53	□□□□□ -0.24
APBB2-228	ENST00000514094	PDCD7	Q8N8D1	485 aa	Known RBP	13.53	□□□□□ -0.24
APBB2-228	ENST00000514094	NPHP4	O75161	1426 aa	Predicted RBP	13.53	□□□□□ -0.24
APBB2-228	ENST00000514094	MED14	O60244	1454 aa		13.53	□□□□□ -0.24
APBB2-228	ENST00000514094	EFCAB6	Q5THR3	1501 aa		13.53	□□□□□ -0.24
APBB2-228	ENST00000514094	UBAP1L	F5GYI3	381 aa		13.52	□□□□□ -0.25
APBB2-228	ENST00000514094	NOS1	P29475	1434 aa		13.52	□□□□□ -0.25
APBB2-228	ENST00000514094	POLR1A	O95602	1720 aa	Predicted RBP	13.51	□□□□□ -0.25
APBB2-228	ENST00000514094	TET3	O43151	1660 aa		13.51	□□□□□ -0.25
APBB2-228	ENST00000514094	KDM5A	P29375	1690 aa	Known RBP	13.5	□□□□□ -0.25
APBB2-228	ENST00000514094	UNC13B	O14795	1591 aa		13.5	□□□□□ -0.25
APBB2-228	ENST00000514094	TMEM2	Q9UHN6	1383 aa		13.5	□□□□□ -0.25
APBB2-228	ENST00000514094	IRX5	P78411	483 aa	Predicted RBP	13.5	□□□□□ -0.25
APBB2-228	ENST00000514094	TRIM52	Q96A61	297 aa		13.5	□□□□□ -0.25
APBB2-228	ENST00000514094	CPS1	P31327	1500 aa		13.49	□□□□□ -0.25
APBB2-228	ENST00000514094	SCAF11	Q99590	1463 aa	Known RBP	13.49	□□□□□ -0.25
APBB2-228	ENST00000514094	TOM1	O60784	492 aa		13.49	□□□□□ -0.25
APBB2-228	ENST00000514094	PPP1R15A	O75807	674 aa	Predicted RBP	13.49	□□□□□ -0.25
APBB2-228	ENST00000514094	GCC2	Q8IWJ2	1684 aa		13.49	□□□□□ -0.25
APBB2-228	ENST00000514094	SLIT1	O75093	1534 aa		13.49	□□□□□ -0.25
APBB2-228	ENST00000514094	ARHGAP23	Q9P227	1491 aa		13.47	□□□□□ -0.25
APBB2-228	ENST00000514094	UBR1	Q8IWV7	1749 aa		13.47	□□□□□ -0.25
APBB2-228	ENST00000514094	HFM1	A2PYH4	1435 aa		13.47	□□□□□ -0.25
APBB2-228	ENST00000514094	IQGAP3	Q86VI3	1631 aa		13.46	□□□□□ -0.25
APBB2-228	ENST00000514094	NAIP	Q13075	1403 aa		13.46	□□□□□ -0.26
APBB2-228	ENST00000514094	KCNV2	Q8TDN2	545 aa		13.45	□□□□□ -0.26
APBB2-228	ENST00000514094	IQGAP1	P46940	1657 aa		13.44	□□□□□ -0.26
APBB2-228	ENST00000514094	POTEI	P0CG38	1075 aa		13.44	□□□□□ -0.26
APBB2-228	ENST00000514094	LTK	P29376	864 aa		13.44	□□□□□ -0.26
APBB2-228	ENST00000514094	PIK3C2B	O00750	1634 aa		13.43	□□□□□ -0.26
APBB2-228	ENST00000514094	HSPA1L	P34931	641 aa		13.43	□□□□□ -0.26
APBB2-228	ENST00000514094	NEURL4	Q96JN8	1562 aa		13.43	□□□□□ -0.26
APBB2-228	ENST00000514094	CRISPLD2	Q9H0B8	497 aa		13.43	□□□□□ -0.26
APBB2-228	ENST00000514094	WDR70	Q9NW82	654 aa		13.43	□□□□□ -0.26
APBB2-228	ENST00000514094	ADGRB3	O60242	1522 aa		13.43	□□□□□ -0.26
APBB2-228	ENST00000514094	IER5L	Q5T953	404 aa		13.42	□□□□□ -0.26
APBB2-228	ENST00000514094	KCNA6	P17658	529 aa		13.41	□□□□□ -0.26
APBB2-228	ENST00000514094	ZNF326	Q5BKZ1	582 aa	Known RBP	13.41	□□□□□ -0.26
APBB2-228	ENST00000514094	DCBLD2	Q96PD2	775 aa		13.41	□□□□□ -0.26
APBB2-228	ENST00000514094	OCEL1	Q9H607	264 aa		13.41	□□□□□ -0.26
APBB2-228	ENST00000514094	COLQ	Q9Y215	455 aa	Predicted RBP	13.41	□□□□□ -0.26
APBB2-228	ENST00000514094	ALK	Q9UM73	1620 aa		13.41	□□□□□ -0.26
APBB2-228	ENST00000514094	SYNM	O15061	1565 aa		13.41	□□□□□ -0.26
APBB2-228	ENST00000514094	PRKCSH	P14314	528 aa	Predicted RBP	13.4	□□□□□ -0.26
APBB2-228	ENST00000514094	LARP6	Q9BRS8	491 aa	Known RBP	13.4	□□□□□ -0.26
APBB2-228	ENST00000514094	TBX22	Q9Y458	520 aa		13.4	□□□□□ -0.26
APBB2-228	ENST00000514094	MICALL2	Q8IY33	904 aa		13.39	□□□□□ -0.27
APBB2-228	ENST00000514094	PLEKHG1	Q9ULL1	1385 aa		13.39	□□□□□ -0.27
APBB2-228	ENST00000514094	RIMS2	Q9UQ26	1411 aa		13.39	□□□□□ -0.27
APBB2-228	ENST00000514094		E9PCH4	1651 aa		13.38	□□□□□ -0.27
APBB2-228	ENST00000514094	POTEF	A5A3E0	1075 aa		13.38	□□□□□ -0.27
APBB2-228	ENST00000514094	PIP4K2B	P78356	416 aa		13.38	□□□□□ -0.27
APBB2-228	ENST00000514094	NBR1	Q14596	966 aa		13.38	□□□□□ -0.27
APBB2-228	ENST00000514094	MFSD10	Q14728	455 aa		13.38	□□□□□ -0.27
APBB2-228	ENST00000514094	SP7	Q8TDD2	431 aa	Predicted RBP	13.38	□□□□□ -0.27
APBB2-228	ENST00000514094	RPGRIP1L	Q68CZ1	1315 aa		13.38	□□□□□ -0.27
APBB2-228	ENST00000514094	PIK3R4	Q99570	1358 aa		13.36	□□□□□ -0.27
APBB2-228	ENST00000514094	PROSER2	Q86WR7	435 aa	Predicted RBP	13.36	□□□□□ -0.27
APBB2-228	ENST00000514094	SLC26A8	Q96RN1	970 aa		13.36	□□□□□ -0.27
APBB2-228	ENST00000514094	HRC	P23327	699 aa		13.35	□□□□□ -0.27
APBB2-228	ENST00000514094	PDE4A	P27815	886 aa		13.35	□□□□□ -0.27
APBB2-228	ENST00000514094	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.35	□□□□□ -0.27
APBB2-228	ENST00000514094	SETD5	Q9C0A6	1442 aa		13.35	□□□□□ -0.27
APBB2-228	ENST00000514094	TMEM131L	A2VDJ0	1609 aa		13.35	□□□□□ -0.27
APBB2-228	ENST00000514094	ZFYVE9	O95405	1425 aa		13.34	□□□□□ -0.27
APBB2-228	ENST00000514094	MPHOSPH9	Q99550	1183 aa		13.34	□□□□□ -0.27
APBB2-228	ENST00000514094	SPHKAP	Q2M3C7	1700 aa		13.33	□□□□□ -0.27
APBB2-228	ENST00000514094	PLCG2	P16885	1265 aa		13.33	□□□□□ -0.28
APBB2-228	ENST00000514094	E2F4	Q16254	413 aa		13.32	□□□□□ -0.28
APBB2-228	ENST00000514094	BOLA1	Q9Y3E2	137 aa		13.32	□□□□□ -0.28
APBB2-228	ENST00000514094	TRPM2	O94759	1503 aa		13.32	□□□□□ -0.28
APBB2-228	ENST00000514094	CCDC144A	A2RUR9	1427 aa		13.31	□□□□□ -0.28
APBB2-228	ENST00000514094	NCOA3	Q9Y6Q9	1424 aa		13.31	□□□□□ -0.28
APBB2-228	ENST00000514094	NKTR	P30414	1462 aa	Known RBP	13.31	□□□□□ -0.28
APBB2-228	ENST00000514094	LRRC7	Q96NW7	1537 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms