RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 TULP1O00294 542 aaPredicted RBP16.39■□□□□ 0.21
SDHA-216ENST00000514027 SLC12A5Q9H2X9 1139 aa16.39■□□□□ 0.21
SDHA-216ENST00000514027 SLFN5Q08AF3 891 aa16.38■□□□□ 0.21
SDHA-216ENST00000514027 SKAP1Q86WV1 359 aa16.38■□□□□ 0.21
SDHA-216ENST00000514027 CYB5RLQ6IPT4 315 aa16.38■□□□□ 0.21
SDHA-216ENST00000514027 MORC1Q86VD1 984 aa16.38■□□□□ 0.21
SDHA-216ENST00000514027 HOMEZQ8IX15 550 aa16.37■□□□□ 0.21
SDHA-216ENST00000514027 RPGRIP1LQ68CZ1 1315 aa16.37■□□□□ 0.21
SDHA-216ENST00000514027 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.37■□□□□ 0.21
SDHA-216ENST00000514027 NEO1Q92859 1461 aa16.37■□□□□ 0.21
SDHA-216ENST00000514027 SPINK5Q9NQ38 1064 aaPredicted RBP16.37■□□□□ 0.21
SDHA-216ENST00000514027 DIP2CQ9Y2E4 1556 aa16.37■□□□□ 0.21
SDHA-216ENST00000514027 GLI2P10070 1586 aa16.36■□□□□ 0.21
SDHA-216ENST00000514027 PDE4AP27815 886 aa16.36■□□□□ 0.21
SDHA-216ENST00000514027 ZBTB47Q9UFB7 747 aaPredicted RBP16.36■□□□□ 0.21
SDHA-216ENST00000514027 SAFB2Q14151 953 aaKnown RBP eCLIP16.34■□□□□ 0.213e-7■□□□□ 9.3
SDHA-216ENST00000514027 NKTRP30414 1462 aaKnown RBP16.34■□□□□ 0.21
SDHA-216ENST00000514027 VGFO15240 615 aaPredicted RBP16.33■□□□□ 0.2
SDHA-216ENST00000514027 POLR3AO14802 1390 aaPredicted RBP16.33■□□□□ 0.2
SDHA-216ENST00000514027 NEXMIFQ5QGS0 1516 aa16.33■□□□□ 0.2
SDHA-216ENST00000514027 MS4A1P11836 297 aa16.33■□□□□ 0.2
SDHA-216ENST00000514027 NEUROD2Q15784 382 aa16.33■□□□□ 0.2
SDHA-216ENST00000514027 DMRT2Q9Y5R5 561 aa16.33■□□□□ 0.2
SDHA-216ENST00000514027 PIK3C2BO00750 1634 aa16.33■□□□□ 0.2
SDHA-216ENST00000514027 E9PSI1 815 aa16.32■□□□□ 0.2
SDHA-216ENST00000514027 USP35Q9P2H5 1018 aa16.32■□□□□ 0.2
SDHA-216ENST00000514027 ARHGEF28Q8N1W1 1705 aaKnown RBP16.32■□□□□ 0.2
SDHA-216ENST00000514027 PLEKHG5O94827 1062 aa16.31■□□□□ 0.2
SDHA-216ENST00000514027 BACH2Q9BYV9 841 aa16.31■□□□□ 0.2
SDHA-216ENST00000514027 RICTORQ6R327 1708 aa16.31■□□□□ 0.2
SDHA-216ENST00000514027 EVC2Q86UK5 1308 aa16.31■□□□□ 0.2
SDHA-216ENST00000514027 YEATS2Q9ULM3 1422 aa16.31■□□□□ 0.2
SDHA-216ENST00000514027 BCAR3O75815 825 aa16.31■□□□□ 0.2
SDHA-216ENST00000514027 TRMT2AQ8IZ69 625 aaKnown RBP16.31■□□□□ 0.2
SDHA-216ENST00000514027 RSPH6AQ9H0K4 717 aa16.31■□□□□ 0.2
SDHA-216ENST00000514027 BRPF3Q9ULD4 1205 aa16.31■□□□□ 0.2
SDHA-216ENST00000514027 CGNL1Q0VF96 1302 aa16.31■□□□□ 0.2
SDHA-216ENST00000514027 SHPRHQ149N8 1683 aa16.3■□□□□ 0.2
SDHA-216ENST00000514027 STK26Q9P289 416 aa16.3■□□□□ 0.2
SDHA-216ENST00000514027 IDI1Q13907 227 aa16.3■□□□□ 0.2
SDHA-216ENST00000514027 TAOK2Q9UL54 1235 aa16.3■□□□□ 0.2
SDHA-216ENST00000514027 RRP7AQ9Y3A4 280 aaKnown RBP16.3■□□□□ 0.2
SDHA-216ENST00000514027 TULP4Q9NRJ4 1543 aa16.29■□□□□ 0.2
SDHA-216ENST00000514027 CABP2Q9NPB3 220 aa16.29■□□□□ 0.2
SDHA-216ENST00000514027 PODXL2Q9NZ53 605 aa16.29■□□□□ 0.2
SDHA-216ENST00000514027 KDM2BQ8NHM5 1336 aa16.28■□□□□ 0.2
SDHA-216ENST00000514027 CENPQQ7L2Z9 268 aaPredicted RBP16.28■□□□□ 0.2
SDHA-216ENST00000514027 MTHFSP49914 203 aa16.27■□□□□ 0.2
SDHA-216ENST00000514027 WWC1Q8IX03 1113 aa16.27■□□□□ 0.2
SDHA-216ENST00000514027 MYO5BQ9ULV0 1848 aa16.27■□□□□ 0.2
SDHA-216ENST00000514027 GLIPR1L2Q4G1C9 344 aa16.27■□□□□ 0.19
SDHA-216ENST00000514027 USP32Q8NFA0 1604 aa16.27■□□□□ 0.19
SDHA-216ENST00000514027 CANXP27824 592 aaKnown RBP16.26■□□□□ 0.19
SDHA-216ENST00000514027 NGEFQ8N5V2 710 aa16.26■□□□□ 0.19
SDHA-216ENST00000514027 CFAP53Q96M91 514 aa16.26■□□□□ 0.19
SDHA-216ENST00000514027 ANKRD36BQ8N2N9 1353 aa16.25■□□□□ 0.19
SDHA-216ENST00000514027 ARHGAP31Q2M1Z3 1444 aa16.25■□□□□ 0.19
SDHA-216ENST00000514027 NEFMP07197 916 aa16.25■□□□□ 0.19
SDHA-216ENST00000514027 RUNDC1Q96C34 613 aa16.25■□□□□ 0.19
SDHA-216ENST00000514027 SRPK2P78362 688 aaKnown RBP16.25■□□□□ 0.19
SDHA-216ENST00000514027 TCP11L2Q8N4U5 519 aa16.24■□□□□ 0.19
SDHA-216ENST00000514027 PREX1Q8TCU6 1659 aa16.24■□□□□ 0.19
SDHA-216ENST00000514027 SLC52A1Q9NWF4 448 aa16.23■□□□□ 0.19
SDHA-216ENST00000514027 IQSEC2Q5JU85 1478 aa16.22■□□□□ 0.19
SDHA-216ENST00000514027 MINK1Q8N4C8 1332 aaPredicted RBP16.22■□□□□ 0.19
SDHA-216ENST00000514027 RGS3P49796 1198 aa16.22■□□□□ 0.19
SDHA-216ENST00000514027 DIP2BQ9P265 1576 aa16.21■□□□□ 0.19
SDHA-216ENST00000514027 KLHL34Q8N239 644 aa16.21■□□□□ 0.19
SDHA-216ENST00000514027 FRAT1Q92837 279 aaPredicted RBP16.21■□□□□ 0.19
SDHA-216ENST00000514027 ZMYND15Q9H091 742 aa16.21■□□□□ 0.19
SDHA-216ENST00000514027 TSPOAP1O95153 1857 aa16.21■□□□□ 0.18
SDHA-216ENST00000514027 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.18
SDHA-216ENST00000514027 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.18
SDHA-216ENST00000514027 TMEM131LA2VDJ0 1609 aa16.2■□□□□ 0.18
SDHA-216ENST00000514027 A0A1W2PP64 1363 aa16.2■□□□□ 0.18
SDHA-216ENST00000514027 NSD2O96028 1365 aa16.2■□□□□ 0.18
SDHA-216ENST00000514027 FBXO31Q5XUX0 539 aaPredicted RBP16.2■□□□□ 0.18
SDHA-216ENST00000514027 POGKQ9P215 609 aa16.2■□□□□ 0.18
SDHA-216ENST00000514027 PUS7Q96PZ0 661 aaKnown RBP16.19■□□□□ 0.18
SDHA-216ENST00000514027 STAG3Q9UJ98 1225 aa16.19■□□□□ 0.18
SDHA-216ENST00000514027 PANK1Q8TE04 598 aa16.19■□□□□ 0.18
SDHA-216ENST00000514027 PRAM1Q96QH2 718 aa16.19■□□□□ 0.18
SDHA-216ENST00000514027 GGNBP2Q9H3C7 697 aa16.19■□□□□ 0.18
SDHA-216ENST00000514027 COG6Q9Y2V7 657 aa16.18■□□□□ 0.18
SDHA-216ENST00000514027 ZFYVE9O95405 1425 aa16.18■□□□□ 0.18
SDHA-216ENST00000514027 LAS1LQ9Y4W2 734 aaKnown RBP16.17■□□□□ 0.18
SDHA-216ENST00000514027 PTPRMP28827 1452 aa16.17■□□□□ 0.18
SDHA-216ENST00000514027 FAM69CQ0P6D2 419 aa16.17■□□□□ 0.18
SDHA-216ENST00000514027 BCL2L13Q9BXK5 485 aa16.17■□□□□ 0.18
SDHA-216ENST00000514027 U2SURPO15042 1029 aaKnown RBP16.16■□□□□ 0.18
SDHA-216ENST00000514027 YTHDC2Q9H6S0 1430 aaKnown RBP16.16■□□□□ 0.18
SDHA-216ENST00000514027 PDE3AQ14432 1141 aa16.15■□□□□ 0.18
SDHA-216ENST00000514027 ABCC11Q96J66 1382 aa16.15■□□□□ 0.18
SDHA-216ENST00000514027 NINLQ9Y2I6 1382 aa16.15■□□□□ 0.18
SDHA-216ENST00000514027 KIF13AQ9H1H9 1805 aa16.15■□□□□ 0.18
SDHA-216ENST00000514027 FAM161AQ3B820 660 aa16.15■□□□□ 0.18
SDHA-216ENST00000514027 WDR63Q8IWG1 891 aa16.15■□□□□ 0.18
SDHA-216ENST00000514027 VSIG10Q8N0Z9 540 aa16.15■□□□□ 0.18
SDHA-216ENST00000514027 ATAD2Q6PL18 1390 aa16.14■□□□□ 0.17
SDHA-216ENST00000514027 RARSP54136 660 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms