RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 HRCP23327 699 aa16.72■□□□□ 0.27
NFKB1-211ENST00000513803 SEPT12Q8IYM1 358 aa16.72■□□□□ 0.27
NFKB1-211ENST00000513803 LRP5O75197 1615 aa16.71■□□□□ 0.27
NFKB1-211ENST00000513803 PSDA5PKW4 1024 aaPredicted RBP16.71■□□□□ 0.27
NFKB1-211ENST00000513803 FOXO3O43524 673 aa16.71■□□□□ 0.27
NFKB1-211ENST00000513803 RALGAPBQ86X10 1494 aa16.71■□□□□ 0.27
NFKB1-211ENST00000513803 LRPPRCP42704 1394 aaKnown RBP16.7■□□□□ 0.26
NFKB1-211ENST00000513803 ROBO2Q9HCK4 1378 aa16.7■□□□□ 0.26
NFKB1-211ENST00000513803 IQGAP3Q86VI3 1631 aa16.7■□□□□ 0.26
NFKB1-211ENST00000513803 VGFO15240 615 aaPredicted RBP16.69■□□□□ 0.26
NFKB1-211ENST00000513803 BAG6P46379 1132 aa16.69■□□□□ 0.26
NFKB1-211ENST00000513803 XPCQ01831 940 aaPredicted RBP16.69■□□□□ 0.26
NFKB1-211ENST00000513803 ONECUT3O60422 494 aaPredicted RBP16.68■□□□□ 0.26
NFKB1-211ENST00000513803 KRT27Q7Z3Y8 459 aa16.68■□□□□ 0.26
NFKB1-211ENST00000513803 ROCK1Q13464 1354 aa16.67■□□□□ 0.26
NFKB1-211ENST00000513803 HFM1A2PYH4 1435 aa16.67■□□□□ 0.26
NFKB1-211ENST00000513803 VPS72Q15906 364 aa16.66■□□□□ 0.26
NFKB1-211ENST00000513803 SLIT2O94813 1529 aa16.65■□□□□ 0.26
NFKB1-211ENST00000513803 CCDC9Q9Y3X0 531 aaKnown RBP16.65■□□□□ 0.26
NFKB1-211ENST00000513803 PXDNQ92626 1479 aa16.65■□□□□ 0.26
NFKB1-211ENST00000513803 HAP1P54257 671 aaPredicted RBP16.64■□□□□ 0.25
NFKB1-211ENST00000513803 GLI3P10071 1580 aa16.64■□□□□ 0.25
NFKB1-211ENST00000513803 MARF1Q9Y4F3 1742 aaKnown RBP16.63■□□□□ 0.25
NFKB1-211ENST00000513803 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.62■□□□□ 0.25
NFKB1-211ENST00000513803 SPATA31A3Q5VYP0 1347 aa16.62■□□□□ 0.25
NFKB1-211ENST00000513803 SPHKAPQ2M3C7 1700 aa16.62■□□□□ 0.25
NFKB1-211ENST00000513803 PRAG1Q86YV5 1406 aa16.62■□□□□ 0.25
NFKB1-211ENST00000513803 NEXMIFQ5QGS0 1516 aa16.61■□□□□ 0.25
NFKB1-211ENST00000513803 A0A0G2JS52 829 aa16.6■□□□□ 0.25
NFKB1-211ENST00000513803 YY1P25490 414 aa16.6■□□□□ 0.25
NFKB1-211ENST00000513803 MYT1Q01538 1121 aa16.6■□□□□ 0.25
NFKB1-211ENST00000513803 R3HDM1Q15032 1099 aaKnown RBP16.6■□□□□ 0.25
NFKB1-211ENST00000513803 BRWD3Q6RI45 1802 aa16.59■□□□□ 0.25
NFKB1-211ENST00000513803 NUTM2FA1L443 756 aa16.59■□□□□ 0.25
NFKB1-211ENST00000513803 EN1Q05925 392 aaPredicted RBP16.59■□□□□ 0.25
NFKB1-211ENST00000513803 KRT28Q7Z3Y7 464 aa16.59■□□□□ 0.25
NFKB1-211ENST00000513803 RPGRIP1LQ68CZ1 1315 aa16.59■□□□□ 0.25
NFKB1-211ENST00000513803 PSME1Q06323 249 aa16.57■□□□□ 0.24
NFKB1-211ENST00000513803 ITGAEP38570 1179 aa16.55■□□□□ 0.24
NFKB1-211ENST00000513803 CDC42BPGQ6DT37 1551 aa16.55■□□□□ 0.24
NFKB1-211ENST00000513803 CCDC144AA2RUR9 1427 aa16.54■□□□□ 0.24
NFKB1-211ENST00000513803 CABLES1Q8TDN4 633 aa16.54■□□□□ 0.24
NFKB1-211ENST00000513803 NAIPQ13075 1403 aa16.53■□□□□ 0.24
NFKB1-211ENST00000513803 DCAF8L1A6NGE4 600 aa16.53■□□□□ 0.24
NFKB1-211ENST00000513803 FAM98CQ17RN3 349 aaKnown RBP16.53■□□□□ 0.24
NFKB1-211ENST00000513803 WAPLQ7Z5K2 1190 aa16.53■□□□□ 0.24
NFKB1-211ENST00000513803 STK26Q9P289 416 aa16.53■□□□□ 0.24
NFKB1-211ENST00000513803 FAM83GA6ND36 823 aa16.52■□□□□ 0.24
NFKB1-211ENST00000513803 PLEKHG5O94827 1062 aa16.52■□□□□ 0.24
NFKB1-211ENST00000513803 USP32Q8NFA0 1604 aa16.52■□□□□ 0.23
NFKB1-211ENST00000513803 LMOD2Q6P5Q4 547 aa16.51■□□□□ 0.23
NFKB1-211ENST00000513803 CLTCL1P53675 1640 aa16.51■□□□□ 0.23
NFKB1-211ENST00000513803 KIF1BO60333 1816 aa16.5■□□□□ 0.23
NFKB1-211ENST00000513803 PHF8Q9UPP1 1060 aa16.49■□□□□ 0.23
NFKB1-211ENST00000513803 TNS3Q68CZ2 1445 aa16.48■□□□□ 0.23
NFKB1-211ENST00000513803 EZH2Q15910 746 aaKnown RBP16.48■□□□□ 0.23
NFKB1-211ENST00000513803 FAM182BQ5T319 152 aa16.47■□□□□ 0.23
NFKB1-211ENST00000513803 BTG4Q9NY30 223 aa16.47■□□□□ 0.23
NFKB1-211ENST00000513803 ARHGEF10O15013 1369 aa16.47■□□□□ 0.23
NFKB1-211ENST00000513803 NWD2Q9ULI1 1742 aa16.47■□□□□ 0.23
NFKB1-211ENST00000513803 DISP2A7MBM2 1401 aa16.46■□□□□ 0.23
NFKB1-211ENST00000513803 CAMKK2Q96RR4 588 aa16.46■□□□□ 0.23
NFKB1-211ENST00000513803 SBNO1A3KN83 1393 aa16.46■□□□□ 0.23
NFKB1-211ENST00000513803 ABCC11Q96J66 1382 aa16.46■□□□□ 0.23
NFKB1-211ENST00000513803 TECPR2O15040 1411 aa16.45■□□□□ 0.22
NFKB1-211ENST00000513803 FAM196AQ6ZSG2 479 aa16.44■□□□□ 0.22
NFKB1-211ENST00000513803 KIF1AQ12756 1690 aa16.43■□□□□ 0.22
NFKB1-211ENST00000513803 NBPF8Q3BBV2 869 aa16.43■□□□□ 0.22
NFKB1-211ENST00000513803 NBPF14Q5TI25 921 aa16.43■□□□□ 0.22
NFKB1-211ENST00000513803 PPP1R1BQ9UD71 204 aaPredicted RBP16.43■□□□□ 0.22
NFKB1-211ENST00000513803 PLCH1Q4KWH8 1693 aa16.43■□□□□ 0.22
NFKB1-211ENST00000513803 SPATA31A5Q5VU36 1347 aa16.43■□□□□ 0.22
NFKB1-211ENST00000513803 SPATA31A7Q8IWB4 1347 aa16.43■□□□□ 0.22
NFKB1-211ENST00000513803 RGPD1P0DJD0 1748 aa16.42■□□□□ 0.22
NFKB1-211ENST00000513803 PARD3Q8TEW0 1356 aa16.42■□□□□ 0.22
NFKB1-211ENST00000513803 PLEKHH1Q9ULM0 1364 aa16.42■□□□□ 0.22
NFKB1-211ENST00000513803 TRIM37O94972 964 aa16.42■□□□□ 0.22
NFKB1-211ENST00000513803 APBA3O96018 575 aa16.42■□□□□ 0.22
NFKB1-211ENST00000513803 TMEM132EQ6IEE7 984 aa16.42■□□□□ 0.22
NFKB1-211ENST00000513803 SIRT1Q96EB6 747 aa16.42■□□□□ 0.22
NFKB1-211ENST00000513803 ADGRF5Q8IZF2 1346 aa16.42■□□□□ 0.22
NFKB1-211ENST00000513803 SPON1Q9HCB6 807 aa16.4■□□□□ 0.22
NFKB1-211ENST00000513803 SLC4A1APQ9BWU0 796 aaKnown RBP16.38■□□□□ 0.21
NFKB1-211ENST00000513803 FMN2Q9NZ56 1722 aa16.38■□□□□ 0.21
NFKB1-211ENST00000513803 KCNQ2O43526 872 aa16.37■□□□□ 0.21
NFKB1-211ENST00000513803 RGL3Q3MIN7 710 aa16.37■□□□□ 0.21
NFKB1-211ENST00000513803 PMFBP1Q8TBY8 1022 aa16.37■□□□□ 0.21
NFKB1-211ENST00000513803 NRXN1Q9ULB1 1477 aa16.36■□□□□ 0.21
NFKB1-211ENST00000513803 PPLO60437 1756 aa16.36■□□□□ 0.21
NFKB1-211ENST00000513803 ANKRD30BQ9BXX2 1392 aa16.36■□□□□ 0.21
NFKB1-211ENST00000513803 RRBP1Q9P2E9 1410 aaKnown RBP16.36■□□□□ 0.21
NFKB1-211ENST00000513803 NINLQ9Y2I6 1382 aa16.35■□□□□ 0.21
NFKB1-211ENST00000513803 YTHDC2Q9H6S0 1430 aaKnown RBP16.35■□□□□ 0.21
NFKB1-211ENST00000513803 ADGRB2O60241 1585 aa16.34■□□□□ 0.21
NFKB1-211ENST00000513803 PRDM11Q9NQV5 511 aa16.34■□□□□ 0.21
NFKB1-211ENST00000513803 PDE3BQ13370 1112 aa16.33■□□□□ 0.2
NFKB1-211ENST00000513803 SPATA31A1Q5TZJ5 1347 aa16.33■□□□□ 0.2
NFKB1-211ENST00000513803 GPRASP1Q5JY77 1395 aa16.33■□□□□ 0.2
NFKB1-211ENST00000513803 COL14A1Q05707 1796 aaKnown RBP16.31■□□□□ 0.2
NFKB1-211ENST00000513803 NRAPQ86VF7 1730 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms