RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 LAMC1P11047 1609 aa13.98□□□□□ -0.17
CAST-239ENST00000513666 NALCNQ8IZF0 1738 aa13.97□□□□□ -0.17
CAST-239ENST00000513666 ADAMTS2O95450 1211 aa13.97□□□□□ -0.17
CAST-239ENST00000513666 METP08581 1390 aa13.96□□□□□ -0.17
CAST-239ENST00000513666 FAM50AQ14320 339 aaKnown RBP13.96□□□□□ -0.17
CAST-239ENST00000513666 USP21Q9UK80 565 aa13.95□□□□□ -0.18
CAST-239ENST00000513666 TRPC5Q9UL62 973 aaPredicted RBP13.95□□□□□ -0.18
CAST-239ENST00000513666 C1orf167Q5SNV9 1468 aa13.95□□□□□ -0.18
CAST-239ENST00000513666 ATRNO75882 1429 aa13.94□□□□□ -0.18
CAST-239ENST00000513666 PTCH1Q13635 1447 aa13.94□□□□□ -0.18
CAST-239ENST00000513666 FNBP4Q8N3X1 1017 aaPredicted RBP13.94□□□□□ -0.18
CAST-239ENST00000513666 SOS2Q07890 1332 aaPredicted RBP13.93□□□□□ -0.18
CAST-239ENST00000513666 CCDC125Q86Z20 511 aa13.92□□□□□ -0.18
CAST-239ENST00000513666 COL22A1Q8NFW1 1626 aaPredicted RBP13.91□□□□□ -0.18
CAST-239ENST00000513666 EP400Q96L91 3159 aa13.91□□□□□ -0.18
CAST-239ENST00000513666 ZBTB22O15209 634 aa13.9□□□□□ -0.18
CAST-239ENST00000513666 NUP155O75694 1391 aa13.9□□□□□ -0.18
CAST-239ENST00000513666 ROCK1Q13464 1354 aa13.9□□□□□ -0.18
CAST-239ENST00000513666 SPHKAPQ2M3C7 1700 aa13.9□□□□□ -0.18
CAST-239ENST00000513666 ABCB7O75027 752 aa13.9□□□□□ -0.19
CAST-239ENST00000513666 ZNF326Q5BKZ1 582 aaKnown RBP13.9□□□□□ -0.19
CAST-239ENST00000513666 ORAI2Q96SN7 254 aa13.89□□□□□ -0.19
CAST-239ENST00000513666 MYOM2P54296 1465 aa13.88□□□□□ -0.19
CAST-239ENST00000513666 BCL9LQ86UU0 1499 aa13.88□□□□□ -0.19
CAST-239ENST00000513666 NEXMIFQ5QGS0 1516 aa13.88□□□□□ -0.19
CAST-239ENST00000513666 MARF1Q9Y4F3 1742 aaKnown RBP13.87□□□□□ -0.19
CAST-239ENST00000513666 PRAG1Q86YV5 1406 aa13.85□□□□□ -0.19
CAST-239ENST00000513666 ROBO2Q9HCK4 1378 aa13.85□□□□□ -0.19
CAST-239ENST00000513666 GJD4Q96KN9 370 aaPredicted RBP13.84□□□□□ -0.19
CAST-239ENST00000513666 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.84□□□□□ -0.19
CAST-239ENST00000513666 CLTCL1P53675 1640 aa13.83□□□□□ -0.19
CAST-239ENST00000513666 BLMP54132 1417 aaPredicted RBP13.83□□□□□ -0.2
CAST-239ENST00000513666 PXDNQ92626 1479 aa13.82□□□□□ -0.2
CAST-239ENST00000513666 LRP5O75197 1615 aa13.82□□□□□ -0.2
CAST-239ENST00000513666 NPHP3Q7Z494 1330 aa13.81□□□□□ -0.2
CAST-239ENST00000513666 KIF1BO60333 1816 aa13.81□□□□□ -0.2
CAST-239ENST00000513666 HFM1A2PYH4 1435 aa13.8□□□□□ -0.2
CAST-239ENST00000513666 GLI3P10071 1580 aa13.8□□□□□ -0.2
CAST-239ENST00000513666 RALGAPBQ86X10 1494 aa13.8□□□□□ -0.2
CAST-239ENST00000513666 CDC42BPGQ6DT37 1551 aa13.79□□□□□ -0.2
CAST-239ENST00000513666 BRWD3Q6RI45 1802 aa13.78□□□□□ -0.2
CAST-239ENST00000513666 SLIT2O94813 1529 aa13.78□□□□□ -0.2
CAST-239ENST00000513666 ESCO1Q5FWF5 840 aa13.78□□□□□ -0.2
CAST-239ENST00000513666 DEFB132Q7Z7B7 95 aa13.78□□□□□ -0.2
CAST-239ENST00000513666 UNC5CLQ8IV45 518 aa13.78□□□□□ -0.2
CAST-239ENST00000513666 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
CAST-239ENST00000513666 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
CAST-239ENST00000513666 FOXO3O43524 673 aa13.75□□□□□ -0.21
CAST-239ENST00000513666 XPCQ01831 940 aaPredicted RBP13.75□□□□□ -0.21
CAST-239ENST00000513666 SF3B2Q13435 895 aaKnown RBP13.75□□□□□ -0.21
CAST-239ENST00000513666 LRPPRCP42704 1394 aaKnown RBP13.75□□□□□ -0.21
CAST-239ENST00000513666 ITGAEP38570 1179 aa13.74□□□□□ -0.21
CAST-239ENST00000513666 USP32Q8NFA0 1604 aa13.74□□□□□ -0.21
CAST-239ENST00000513666 SEPT12Q8IYM1 358 aa13.73□□□□□ -0.21
CAST-239ENST00000513666 NAIPQ13075 1403 aa13.73□□□□□ -0.21
CAST-239ENST00000513666 RPGRIP1LQ68CZ1 1315 aa13.73□□□□□ -0.21
CAST-239ENST00000513666 PPLO60437 1756 aa13.72□□□□□ -0.21
CAST-239ENST00000513666 POLA2Q14181 598 aa13.72□□□□□ -0.21
CAST-239ENST00000513666 SPATA31A3Q5VYP0 1347 aa13.72□□□□□ -0.21
CAST-239ENST00000513666 VPS72Q15906 364 aa13.7□□□□□ -0.22
CAST-239ENST00000513666 KIF1AQ12756 1690 aa13.7□□□□□ -0.22
CAST-239ENST00000513666 ONECUT3O60422 494 aaPredicted RBP13.69□□□□□ -0.22
CAST-239ENST00000513666 NWD2Q9ULI1 1742 aa13.69□□□□□ -0.22
CAST-239ENST00000513666 CCDC144AA2RUR9 1427 aa13.69□□□□□ -0.22
CAST-239ENST00000513666 TECPR2O15040 1411 aa13.69□□□□□ -0.22
CAST-239ENST00000513666 PLCH1Q4KWH8 1693 aa13.69□□□□□ -0.22
CAST-239ENST00000513666 PSDA5PKW4 1024 aaPredicted RBP13.69□□□□□ -0.22
CAST-239ENST00000513666 HRCP23327 699 aa13.69□□□□□ -0.22
CAST-239ENST00000513666 KRT27Q7Z3Y8 459 aa13.69□□□□□ -0.22
CAST-239ENST00000513666 FMN2Q9NZ56 1722 aa13.68□□□□□ -0.22
CAST-239ENST00000513666 NUTM2FA1L443 756 aa13.68□□□□□ -0.22
CAST-239ENST00000513666 ATXN8OSP0DMR3 200 aa13.68□□□□□ -0.22
CAST-239ENST00000513666 BAG6P46379 1132 aa13.67□□□□□ -0.22
CAST-239ENST00000513666 KRT28Q7Z3Y7 464 aa13.66□□□□□ -0.22
CAST-239ENST00000513666 WAPLQ7Z5K2 1190 aa13.66□□□□□ -0.22
CAST-239ENST00000513666 TNS3Q68CZ2 1445 aa13.66□□□□□ -0.22
CAST-239ENST00000513666 HAP1P54257 671 aaPredicted RBP13.65□□□□□ -0.22
CAST-239ENST00000513666 KNDC1Q76NI1 1749 aa13.65□□□□□ -0.22
CAST-239ENST00000513666 ABCA3Q99758 1704 aa13.65□□□□□ -0.22
CAST-239ENST00000513666 CCDC9Q9Y3X0 531 aaKnown RBP13.64□□□□□ -0.23
CAST-239ENST00000513666 ABCC11Q96J66 1382 aa13.64□□□□□ -0.23
CAST-239ENST00000513666 PLEKHH1Q9ULM0 1364 aa13.64□□□□□ -0.23
CAST-239ENST00000513666 STK26Q9P289 416 aa13.64□□□□□ -0.23
CAST-239ENST00000513666 ADGRF5Q8IZF2 1346 aa13.63□□□□□ -0.23
CAST-239ENST00000513666 CABLES1Q8TDN4 633 aa13.63□□□□□ -0.23
CAST-239ENST00000513666 RGPD1P0DJD0 1748 aa13.63□□□□□ -0.23
CAST-239ENST00000513666 RRBP1Q9P2E9 1410 aaKnown RBP13.62□□□□□ -0.23
CAST-239ENST00000513666 PSME1Q06323 249 aa13.62□□□□□ -0.23
CAST-239ENST00000513666 RGPD8O14715 1765 aaPredicted RBP13.61□□□□□ -0.23
CAST-239ENST00000513666 NRAPQ86VF7 1730 aa13.61□□□□□ -0.23
CAST-239ENST00000513666 IFT172Q9UG01 1749 aa13.61□□□□□ -0.23
CAST-239ENST00000513666 SBNO1A3KN83 1393 aa13.61□□□□□ -0.23
CAST-239ENST00000513666 ARHGEF10O15013 1369 aa13.61□□□□□ -0.23
CAST-239ENST00000513666 A0A0G2JS52 829 aa13.6□□□□□ -0.23
CAST-239ENST00000513666 FAM83GA6ND36 823 aa13.6□□□□□ -0.23
CAST-239ENST00000513666 MYT1Q01538 1121 aa13.6□□□□□ -0.23
CAST-239ENST00000513666 PHF8Q9UPP1 1060 aa13.6□□□□□ -0.23
CAST-239ENST00000513666 EN1Q05925 392 aaPredicted RBP13.59□□□□□ -0.23
CAST-239ENST00000513666 R3HDM1Q15032 1099 aaKnown RBP13.59□□□□□ -0.23
CAST-239ENST00000513666 DISP2A7MBM2 1401 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms