RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 CFAP70Q5T0N1 1121 aa28.56■■■□□ 2.16
CCHCR1-230ENST00000513222 DHX57Q6P158 1386 aaKnown RBP28.55■■■□□ 2.16
CCHCR1-230ENST00000513222 WAPLQ7Z5K2 1190 aa28.55■■■□□ 2.16
CCHCR1-230ENST00000513222 LRP6O75581 1613 aa28.54■■■□□ 2.16
CCHCR1-230ENST00000513222 DLC1Q96QB1 1528 aa28.54■■■□□ 2.16
CCHCR1-230ENST00000513222 LRRC59Q96AG4 307 aaKnown RBP28.54■■■□□ 2.16
CCHCR1-230ENST00000513222 STK26Q9P289 416 aa28.54■■■□□ 2.16
CCHCR1-230ENST00000513222 PLEKHH1Q9ULM0 1364 aa28.52■■■□□ 2.16
CCHCR1-230ENST00000513222 SOS2Q07890 1332 aaPredicted RBP28.52■■■□□ 2.16
CCHCR1-230ENST00000513222 FMN2Q9NZ56 1722 aa28.52■■■□□ 2.16
CCHCR1-230ENST00000513222 ORAI2Q96SN7 254 aa28.51■■■□□ 2.15
CCHCR1-230ENST00000513222 DCAF11Q8TEB1 546 aa28.47■■■□□ 2.15
CCHCR1-230ENST00000513222 DDX17Q92841 729 aaKnown RBP28.46■■■□□ 2.15
CCHCR1-230ENST00000513222 PNPLA6Q8IY17 1366 aa28.46■■■□□ 2.15
CCHCR1-230ENST00000513222 POTEAQ6S8J7 498 aa28.45■■■□□ 2.14
CCHCR1-230ENST00000513222 KIAA1210Q9ULL0 1709 aa28.43■■■□□ 2.14
CCHCR1-230ENST00000513222 ADGRB2O60241 1585 aa28.42■■■□□ 2.14
CCHCR1-230ENST00000513222 COL22A1Q8NFW1 1626 aaPredicted RBP28.42■■■□□ 2.14
CCHCR1-230ENST00000513222 PXDNQ92626 1479 aa28.41■■■□□ 2.14
CCHCR1-230ENST00000513222 RGPD8O14715 1765 aaPredicted RBP28.41■■■□□ 2.14
CCHCR1-230ENST00000513222 KIF1AQ12756 1690 aa28.4■■■□□ 2.14
CCHCR1-230ENST00000513222 NPHP3Q7Z494 1330 aa28.4■■■□□ 2.14
CCHCR1-230ENST00000513222 ESCO1Q5FWF5 840 aa28.39■■■□□ 2.14
CCHCR1-230ENST00000513222 KDM2AQ9Y2K7 1162 aa28.39■■■□□ 2.14
CCHCR1-230ENST00000513222 PRAM1Q96QH2 718 aa28.38■■■□□ 2.13
CCHCR1-230ENST00000513222 ZNF772Q68DY9 489 aaPredicted RBP28.35■■■□□ 2.13
CCHCR1-230ENST00000513222 ARHGEF28Q8N1W1 1705 aaKnown RBP28.33■■■□□ 2.13
CCHCR1-230ENST00000513222 USP32Q8NFA0 1604 aa28.32■■■□□ 2.12
CCHCR1-230ENST00000513222 FOXO3O43524 673 aa28.32■■■□□ 2.12
CCHCR1-230ENST00000513222 ANKARQ7Z5J8 1434 aa28.32■■■□□ 2.12
CCHCR1-230ENST00000513222 MEX3CQ5U5Q3 659 aaKnown RBP28.31■■■□□ 2.12
CCHCR1-230ENST00000513222 POGKQ9P215 609 aa28.29■■■□□ 2.12
CCHCR1-230ENST00000513222 TRAK1Q9UPV9 953 aa28.29■■■□□ 2.12
CCHCR1-230ENST00000513222 NUTM2BA6NNL0 878 aaPredicted RBP28.28■■■□□ 2.12
CCHCR1-230ENST00000513222 NUTM2EB1AL46 878 aaPredicted RBP28.28■■■□□ 2.12
CCHCR1-230ENST00000513222 NUTM2AQ8IVF1 878 aaPredicted RBP28.28■■■□□ 2.12
CCHCR1-230ENST00000513222 MARF1Q9Y4F3 1742 aaKnown RBP28.26■■■□□ 2.12
CCHCR1-230ENST00000513222 NUTM2FA1L443 756 aa28.26■■■□□ 2.11
CCHCR1-230ENST00000513222 PHF8Q9UPP1 1060 aa28.24■■■□□ 2.11
CCHCR1-230ENST00000513222 SPATA31A3Q5VYP0 1347 aa28.23■■■□□ 2.11
CCHCR1-230ENST00000513222 SAFB2Q14151 953 aaKnown RBP eCLIP28.23■■■□□ 2.11
CCHCR1-230ENST00000513222 EIF3AQ14152 1382 aaKnown RBP28.23■■■□□ 2.11
CCHCR1-230ENST00000513222 TULP4Q9NRJ4 1543 aa28.23■■■□□ 2.11
CCHCR1-230ENST00000513222 AFF2P51816 1311 aa28.22■■■□□ 2.11
CCHCR1-230ENST00000513222 CDK12Q9NYV4 1490 aaPredicted RBP28.22■■■□□ 2.11
CCHCR1-230ENST00000513222 WASLO00401 505 aaPredicted RBP28.2■■■□□ 2.1
CCHCR1-230ENST00000513222 FNBP4Q8N3X1 1017 aaPredicted RBP28.2■■■□□ 2.1
CCHCR1-230ENST00000513222 KRT28Q7Z3Y7 464 aa28.19■■■□□ 2.1
CCHCR1-230ENST00000513222 SBNO1A3KN83 1393 aa28.19■■■□□ 2.1
CCHCR1-230ENST00000513222 XPCQ01831 940 aaPredicted RBP28.17■■■□□ 2.1
CCHCR1-230ENST00000513222 L3MBTL2Q969R5 705 aa28.17■■■□□ 2.1
CCHCR1-230ENST00000513222 C8orf37Q96NL8 207 aa28.17■■■□□ 2.1
CCHCR1-230ENST00000513222 MINK1Q8N4C8 1332 aaPredicted RBP28.17■■■□□ 2.1
CCHCR1-230ENST00000513222 PRR36Q9H6K5 1346 aa28.17■■■□□ 2.1
CCHCR1-230ENST00000513222 NBPF1Q3BBV0 1214 aa28.16■■■□□ 2.1
CCHCR1-230ENST00000513222 TRPM3Q9HCF6 1732 aaPredicted RBP28.15■■■□□ 2.1
CCHCR1-230ENST00000513222 RXRBP28702 533 aa28.15■■■□□ 2.1
CCHCR1-230ENST00000513222 PSME1Q06323 249 aa28.15■■■□□ 2.1
CCHCR1-230ENST00000513222 TNS3Q68CZ2 1445 aa28.15■■■□□ 2.1
CCHCR1-230ENST00000513222 ITSN1Q15811 1721 aa28.15■■■□□ 2.1
CCHCR1-230ENST00000513222 HIRIP3Q9BW71 556 aaPredicted RBP28.14■■■□□ 2.1
CCHCR1-230ENST00000513222 ADAMTS2O95450 1211 aa28.13■■■□□ 2.09
CCHCR1-230ENST00000513222 NGLY1Q96IV0 654 aa28.13■■■□□ 2.09
CCHCR1-230ENST00000513222 SIN3AQ96ST3 1273 aa28.13■■■□□ 2.09
CCHCR1-230ENST00000513222 TRPM1Q7Z4N2 1603 aa28.11■■■□□ 2.09
CCHCR1-230ENST00000513222 ALS2Q96Q42 1657 aa28.11■■■□□ 2.09
CCHCR1-230ENST00000513222 ATP7BP35670 1465 aa28.11■■■□□ 2.09
CCHCR1-230ENST00000513222 QTRT2Q9H974 415 aaKnown RBP28.11■■■□□ 2.09
CCHCR1-230ENST00000513222 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.09■■■□□ 2.09
CCHCR1-230ENST00000513222 RBM6P78332 1123 aaKnown RBP28.09■■■□□ 2.09
CCHCR1-230ENST00000513222 ABCA3Q99758 1704 aa28.09■■■□□ 2.09
CCHCR1-230ENST00000513222 TOPAZ1Q8N9V7 1692 aa28.08■■■□□ 2.09
CCHCR1-230ENST00000513222 TRIM26Q12899 539 aaPredicted RBP28.08■■■□□ 2.09
CCHCR1-230ENST00000513222 ARHGEF10O15013 1369 aa28.08■■■□□ 2.09
CCHCR1-230ENST00000513222 BCL9LQ86UU0 1499 aa28.08■■■□□ 2.09
CCHCR1-230ENST00000513222 PMFBP1Q8TBY8 1022 aa28.06■■■□□ 2.08
CCHCR1-230ENST00000513222 ATRNO75882 1429 aa28.06■■■□□ 2.08
CCHCR1-230ENST00000513222 USP21Q9UK80 565 aa28.05■■■□□ 2.08
CCHCR1-230ENST00000513222 SLIT2O94813 1529 aa28.04■■■□□ 2.08
CCHCR1-230ENST00000513222 NUDT16Q96DE0 195 aaKnown RBP28.04■■■□□ 2.08
CCHCR1-230ENST00000513222 CDK19Q9BWU1 502 aa28.03■■■□□ 2.08
CCHCR1-230ENST00000513222 TRPC5Q9UL62 973 aaPredicted RBP28.03■■■□□ 2.08
CCHCR1-230ENST00000513222 GPRASP1Q5JY77 1395 aa28.02■■■□□ 2.08
CCHCR1-230ENST00000513222 POLR3AO14802 1390 aaPredicted RBP28.01■■■□□ 2.07
CCHCR1-230ENST00000513222 QRICH2Q9H0J4 1663 aa28.01■■■□□ 2.07
CCHCR1-230ENST00000513222 NWD2Q9ULI1 1742 aa28.01■■■□□ 2.07
CCHCR1-230ENST00000513222 CRYBG1Q9Y4K1 1723 aa28.01■■■□□ 2.07
CCHCR1-230ENST00000513222 CENPJQ9HC77 1338 aaPredicted RBP28■■■□□ 2.07
CCHCR1-230ENST00000513222 CCDC61Q9Y6R9 512 aa28■■■□□ 2.07
CCHCR1-230ENST00000513222 PLEKHG3A1L390 1219 aa27.99■■■□□ 2.07
CCHCR1-230ENST00000513222 NEUROD1Q13562 356 aa27.99■■■□□ 2.07
CCHCR1-230ENST00000513222 RGS12O14924 1447 aa27.99■■■□□ 2.07
CCHCR1-230ENST00000513222 NGDNQ8NEJ9 315 aaKnown RBP27.95■■■□□ 2.06
CCHCR1-230ENST00000513222 PLCH1Q4KWH8 1693 aa27.94■■■□□ 2.06
CCHCR1-230ENST00000513222 UNC5CLQ8IV45 518 aa27.93■■■□□ 2.06
CCHCR1-230ENST00000513222 CABLES1Q8TDN4 633 aa27.93■■■□□ 2.06
CCHCR1-230ENST00000513222 NBPF8Q3BBV2 869 aa27.92■■■□□ 2.06
CCHCR1-230ENST00000513222 UPF1Q92900 1129 aaKnown RBP eCLIP27.92■■■□□ 2.06
CCHCR1-230ENST00000513222 ROCK2O75116 1388 aaKnown RBP27.9■■■□□ 2.06
CCHCR1-230ENST00000513222 GJD4Q96KN9 370 aaPredicted RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms