RNA–Protein interactions for RNA: ENST00000513151.5

SKP2-206, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3

Gene SKP2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-206ENST00000513151 CCER1Q8TC90 406 aaPredicted RBP12.84□□□□□ -0.35
SKP2-206ENST00000513151 NALCNQ8IZF0 1738 aa12.84□□□□□ -0.35
SKP2-206ENST00000513151 KIAA1210Q9ULL0 1709 aa12.83□□□□□ -0.36
SKP2-206ENST00000513151 MST1RQ04912 1400 aa12.83□□□□□ -0.36
SKP2-206ENST00000513151 SAFB2Q14151 953 aaKnown RBP eCLIP12.83□□□□□ -0.36
SKP2-206ENST00000513151 NBPF8Q3BBV2 869 aa12.83□□□□□ -0.36
SKP2-206ENST00000513151 BRINP3Q76B58 766 aa12.82□□□□□ -0.36
SKP2-206ENST00000513151 ROBO1Q9Y6N7 1651 aa12.81□□□□□ -0.36
SKP2-206ENST00000513151 TIMELESSQ9UNS1 1208 aa12.81□□□□□ -0.36
SKP2-206ENST00000513151 C1orf167Q5SNV9 1468 aa12.8□□□□□ -0.36
SKP2-206ENST00000513151 CDC42BPGQ6DT37 1551 aa12.8□□□□□ -0.36
SKP2-206ENST00000513151 ORAI2Q96SN7 254 aa12.79□□□□□ -0.36
SKP2-206ENST00000513151 ROCK2O75116 1388 aaKnown RBP12.79□□□□□ -0.36
SKP2-206ENST00000513151 NUTM2FA1L443 756 aa12.78□□□□□ -0.36
SKP2-206ENST00000513151 HIRIP3Q9BW71 556 aaPredicted RBP12.78□□□□□ -0.36
SKP2-206ENST00000513151 MINK1Q8N4C8 1332 aaPredicted RBP12.78□□□□□ -0.36
SKP2-206ENST00000513151 TRPM1Q7Z4N2 1603 aa12.77□□□□□ -0.36
SKP2-206ENST00000513151 ESCO1Q5FWF5 840 aa12.77□□□□□ -0.37
SKP2-206ENST00000513151 WASLO00401 505 aaPredicted RBP12.76□□□□□ -0.37
SKP2-206ENST00000513151 GPRASP1Q5JY77 1395 aa12.76□□□□□ -0.37
SKP2-206ENST00000513151 ARHGEF28Q8N1W1 1705 aaKnown RBP12.75□□□□□ -0.37
SKP2-206ENST00000513151 CARD11Q9BXL7 1154 aa12.75□□□□□ -0.37
SKP2-206ENST00000513151 CENPJQ9HC77 1338 aaPredicted RBP12.75□□□□□ -0.37
SKP2-206ENST00000513151 AHDC1Q5TGY3 1603 aaPredicted RBP12.74□□□□□ -0.37
SKP2-206ENST00000513151 DDX17Q92841 729 aaKnown RBP12.74□□□□□ -0.37
SKP2-206ENST00000513151 FMN2Q9NZ56 1722 aa12.74□□□□□ -0.37
SKP2-206ENST00000513151 ADGRB2O60241 1585 aa12.73□□□□□ -0.37
SKP2-206ENST00000513151 RALGAPBQ86X10 1494 aa12.73□□□□□ -0.37
SKP2-206ENST00000513151 PHLPP1O60346 1717 aa12.73□□□□□ -0.37
SKP2-206ENST00000513151 EIF3AQ14152 1382 aaKnown RBP12.72□□□□□ -0.37
SKP2-206ENST00000513151 FOXO3O43524 673 aa12.72□□□□□ -0.37
SKP2-206ENST00000513151 LRRC59Q96AG4 307 aaKnown RBP12.72□□□□□ -0.37
SKP2-206ENST00000513151 CDK19Q9BWU1 502 aa12.72□□□□□ -0.37
SKP2-206ENST00000513151 PHF8Q9UPP1 1060 aa12.72□□□□□ -0.37
SKP2-206ENST00000513151 ANKARQ7Z5J8 1434 aa12.71□□□□□ -0.37
SKP2-206ENST00000513151 JCADQ9P266 1359 aa12.71□□□□□ -0.37
SKP2-206ENST00000513151 SOS2Q07890 1332 aaPredicted RBP12.71□□□□□ -0.37
SKP2-206ENST00000513151 NPHP3Q7Z494 1330 aa12.71□□□□□ -0.37
SKP2-206ENST00000513151 COL16A1Q07092 1604 aaPredicted RBP12.71□□□□□ -0.37
SKP2-206ENST00000513151 NHSL1Q5SYE7 1610 aa12.7□□□□□ -0.38
SKP2-206ENST00000513151 PRR36Q9H6K5 1346 aa12.7□□□□□ -0.38
SKP2-206ENST00000513151 NUDT16Q96DE0 195 aaKnown RBP12.7□□□□□ -0.38
SKP2-206ENST00000513151 TULP4Q9NRJ4 1543 aa12.69□□□□□ -0.38
SKP2-206ENST00000513151 SRPK2P78362 688 aaKnown RBP12.68□□□□□ -0.38
SKP2-206ENST00000513151 KRT28Q7Z3Y7 464 aa12.68□□□□□ -0.38
SKP2-206ENST00000513151 PMFBP1Q8TBY8 1022 aa12.68□□□□□ -0.38
SKP2-206ENST00000513151 USP32Q8NFA0 1604 aa12.68□□□□□ -0.38
SKP2-206ENST00000513151 EVC2Q86UK5 1308 aa12.67□□□□□ -0.38
SKP2-206ENST00000513151 XPCQ01831 940 aaPredicted RBP12.67□□□□□ -0.38
SKP2-206ENST00000513151 PSME1Q06323 249 aa12.67□□□□□ -0.38
SKP2-206ENST00000513151 CCDC61Q9Y6R9 512 aa12.67□□□□□ -0.38
SKP2-206ENST00000513151 SPATA31A6Q5VVP1 1343 aa12.66□□□□□ -0.38
SKP2-206ENST00000513151 CABP2Q9NPB3 220 aa12.66□□□□□ -0.38
SKP2-206ENST00000513151 KIF1AQ12756 1690 aa12.66□□□□□ -0.38
SKP2-206ENST00000513151 QRICH2Q9H0J4 1663 aa12.66□□□□□ -0.38
SKP2-206ENST00000513151 ATP7BP35670 1465 aa12.65□□□□□ -0.38
SKP2-206ENST00000513151 PXDNQ92626 1479 aa12.65□□□□□ -0.38
SKP2-206ENST00000513151 NGDNQ8NEJ9 315 aaKnown RBP12.65□□□□□ -0.38
SKP2-206ENST00000513151 RGPD8O14715 1765 aaPredicted RBP12.65□□□□□ -0.38
SKP2-206ENST00000513151 SBNO2Q9Y2G9 1366 aa12.65□□□□□ -0.38
SKP2-206ENST00000513151 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
SKP2-206ENST00000513151 PLEKHG3A1L390 1219 aa12.64□□□□□ -0.39
SKP2-206ENST00000513151 SLC24A1O60721 1099 aa12.64□□□□□ -0.39
SKP2-206ENST00000513151 PNPLA6Q8IY17 1366 aa12.64□□□□□ -0.39
SKP2-206ENST00000513151 DISP3Q9P2K9 1392 aa12.64□□□□□ -0.39
SKP2-206ENST00000513151 SPATA31A3Q5VYP0 1347 aa12.63□□□□□ -0.39
SKP2-206ENST00000513151 MED1Q15648 1581 aaPredicted RBP12.63□□□□□ -0.39
SKP2-206ENST00000513151 SHPRHQ149N8 1683 aa12.63□□□□□ -0.39
SKP2-206ENST00000513151 USP47Q96K76 1375 aa12.62□□□□□ -0.39
SKP2-206ENST00000513151 NUTM2BA6NNL0 878 aaPredicted RBP12.62□□□□□ -0.39
SKP2-206ENST00000513151 NUTM2EB1AL46 878 aaPredicted RBP12.62□□□□□ -0.39
SKP2-206ENST00000513151 NUTM2AQ8IVF1 878 aaPredicted RBP12.62□□□□□ -0.39
SKP2-206ENST00000513151 TESK2Q96S53 571 aa12.62□□□□□ -0.39
SKP2-206ENST00000513151 ACEP12821 1306 aa12.62□□□□□ -0.39
SKP2-206ENST00000513151 SBNO1A3KN83 1393 aa12.61□□□□□ -0.39
SKP2-206ENST00000513151 PHF23Q9BUL5 403 aaPredicted RBP12.61□□□□□ -0.39
SKP2-206ENST00000513151 CABP1Q9NZU7 370 aa12.61□□□□□ -0.39
SKP2-206ENST00000513151 PPIP5K1Q6PFW1 1433 aa12.61□□□□□ -0.39
SKP2-206ENST00000513151 ITSN1Q15811 1721 aa12.6□□□□□ -0.39
SKP2-206ENST00000513151 POLR3AO14802 1390 aaPredicted RBP12.6□□□□□ -0.39
SKP2-206ENST00000513151 PUS7Q96PZ0 661 aaKnown RBP12.6□□□□□ -0.39
SKP2-206ENST00000513151 MEX3CQ5U5Q3 659 aaKnown RBP12.59□□□□□ -0.39
SKP2-206ENST00000513151 LMOD2Q6P5Q4 547 aa12.59□□□□□ -0.39
SKP2-206ENST00000513151 TNS3Q68CZ2 1445 aa12.59□□□□□ -0.39
SKP2-206ENST00000513151 LRP6O75581 1613 aa12.59□□□□□ -0.39
SKP2-206ENST00000513151 ATAD2Q6PL18 1390 aa12.58□□□□□ -0.4
SKP2-206ENST00000513151 TOPAZ1Q8N9V7 1692 aa12.58□□□□□ -0.4
SKP2-206ENST00000513151 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
SKP2-206ENST00000513151 ARHGEF10O15013 1369 aa12.57□□□□□ -0.4
SKP2-206ENST00000513151 COL22A1Q8NFW1 1626 aaPredicted RBP12.56□□□□□ -0.4
SKP2-206ENST00000513151 ADAMTS2O95450 1211 aa12.56□□□□□ -0.4
SKP2-206ENST00000513151 EIF4G2P78344 907 aaKnown RBP eCLIP12.56□□□□□ -0.4
SKP2-206ENST00000513151 TMF1P82094 1093 aa12.56□□□□□ -0.4
SKP2-206ENST00000513151 ZNF692Q9BU19 519 aaPredicted RBP12.56□□□□□ -0.4
SKP2-206ENST00000513151 RGS17Q9UGC6 210 aaPredicted RBP12.56□□□□□ -0.4
SKP2-206ENST00000513151 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
SKP2-206ENST00000513151 TMC1Q8TDI8 760 aa12.55□□□□□ -0.4
SKP2-206ENST00000513151 TRPM3Q9HCF6 1732 aaPredicted RBP12.54□□□□□ -0.4
SKP2-206ENST00000513151 CDCA8Q53HL2 280 aa12.54□□□□□ -0.4
SKP2-206ENST00000513151 CABLES1Q8TDN4 633 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms