RNA–Protein interactions for RNA: ENST00000513121.1

MATR3-221, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-221ENST00000513121 SPATA31A6Q5VVP1 1343 aa28.05■■■□□ 2.08
MATR3-221ENST00000513121 DCAF11Q8TEB1 546 aa28.04■■■□□ 2.08
MATR3-221ENST00000513121 DHX57Q6P158 1386 aaKnown RBP28.02■■■□□ 2.08
MATR3-221ENST00000513121 SIRT1Q96EB6 747 aa28.02■■■□□ 2.08
MATR3-221ENST00000513121 NUTM2FA1L443 756 aa28.01■■■□□ 2.07
MATR3-221ENST00000513121 LRRC59Q96AG4 307 aaKnown RBP28.01■■■□□ 2.07
MATR3-221ENST00000513121 NUTM2BA6NNL0 878 aaPredicted RBP28■■■□□ 2.07
MATR3-221ENST00000513121 NUTM2EB1AL46 878 aaPredicted RBP28■■■□□ 2.07
MATR3-221ENST00000513121 NUTM2AQ8IVF1 878 aaPredicted RBP28■■■□□ 2.07
MATR3-221ENST00000513121 ESCO1Q5FWF5 840 aa27.98■■■□□ 2.07
MATR3-221ENST00000513121 NHSL1Q5SYE7 1610 aa27.98■■■□□ 2.07
MATR3-221ENST00000513121 SOS2Q07890 1332 aaPredicted RBP27.97■■■□□ 2.07
MATR3-221ENST00000513121 PRAM1Q96QH2 718 aa27.96■■■□□ 2.07
MATR3-221ENST00000513121 CDC42BPGQ6DT37 1551 aa27.95■■■□□ 2.07
MATR3-221ENST00000513121 SAFB2Q14151 953 aaKnown RBP eCLIP27.95■■■□□ 2.06
MATR3-221ENST00000513121 MEX3CQ5U5Q3 659 aaKnown RBP27.95■■■□□ 2.06
MATR3-221ENST00000513121 PNPLA6Q8IY17 1366 aa27.95■■■□□ 2.06
MATR3-221ENST00000513121 SHPRHQ149N8 1683 aa27.94■■■□□ 2.06
MATR3-221ENST00000513121 KNDC1Q76NI1 1749 aa27.92■■■□□ 2.06
MATR3-221ENST00000513121 ADGRB1O14514 1584 aa27.92■■■□□ 2.06
MATR3-221ENST00000513121 FOXO3O43524 673 aa27.91■■■□□ 2.06
MATR3-221ENST00000513121 TRAK1Q9UPV9 953 aa27.91■■■□□ 2.06
MATR3-221ENST00000513121 XPCQ01831 940 aaPredicted RBP27.9■■■□□ 2.06
MATR3-221ENST00000513121 STAC3Q96MF2 364 aa27.89■■■□□ 2.06
MATR3-221ENST00000513121 LAMC1P11047 1609 aa27.88■■■□□ 2.05
MATR3-221ENST00000513121 POGKQ9P215 609 aa27.87■■■□□ 2.05
MATR3-221ENST00000513121 NPHP3Q7Z494 1330 aa27.85■■■□□ 2.05
MATR3-221ENST00000513121 DLC1Q96QB1 1528 aa27.84■■■□□ 2.05
MATR3-221ENST00000513121 ZNF772Q68DY9 489 aaPredicted RBP27.83■■■□□ 2.05
MATR3-221ENST00000513121 HIRIP3Q9BW71 556 aaPredicted RBP27.82■■■□□ 2.04
MATR3-221ENST00000513121 PXDNQ92626 1479 aa27.82■■■□□ 2.04
MATR3-221ENST00000513121 ADAMTS2O95450 1211 aa27.81■■■□□ 2.04
MATR3-221ENST00000513121 AFF2P51816 1311 aa27.81■■■□□ 2.04
MATR3-221ENST00000513121 C8orf37Q96NL8 207 aa27.8■■■□□ 2.04
MATR3-221ENST00000513121 MINK1Q8N4C8 1332 aaPredicted RBP27.79■■■□□ 2.04
MATR3-221ENST00000513121 SIN3AQ96ST3 1273 aa27.79■■■□□ 2.04
MATR3-221ENST00000513121 FMN2Q9NZ56 1722 aa27.78■■■□□ 2.04
MATR3-221ENST00000513121 PHF8Q9UPP1 1060 aa27.78■■■□□ 2.04
MATR3-221ENST00000513121 NBPF1Q3BBV0 1214 aa27.76■■■□□ 2.03
MATR3-221ENST00000513121 KRT28Q7Z3Y7 464 aa27.75■■■□□ 2.03
MATR3-221ENST00000513121 L3MBTL2Q969R5 705 aa27.73■■■□□ 2.03
MATR3-221ENST00000513121 PRR36Q9H6K5 1346 aa27.72■■■□□ 2.03
MATR3-221ENST00000513121 PMFBP1Q8TBY8 1022 aa27.72■■■□□ 2.03
MATR3-221ENST00000513121 NGLY1Q96IV0 654 aa27.72■■■□□ 2.03
MATR3-221ENST00000513121 SPATA31A3Q5VYP0 1347 aa27.71■■■□□ 2.03
MATR3-221ENST00000513121 WASLO00401 505 aaPredicted RBP27.71■■■□□ 2.03
MATR3-221ENST00000513121 RXRBP28702 533 aa27.7■■■□□ 2.02
MATR3-221ENST00000513121 NEUROD1Q13562 356 aa27.69■■■□□ 2.02
MATR3-221ENST00000513121 QTRT2Q9H974 415 aaKnown RBP27.68■■■□□ 2.02
MATR3-221ENST00000513121 ADGRB2O60241 1585 aa27.68■■■□□ 2.02
MATR3-221ENST00000513121 ANKARQ7Z5J8 1434 aa27.67■■■□□ 2.02
MATR3-221ENST00000513121 USP32Q8NFA0 1604 aa27.66■■■□□ 2.02
MATR3-221ENST00000513121 COL22A1Q8NFW1 1626 aaPredicted RBP27.66■■■□□ 2.02
MATR3-221ENST00000513121 FNBP4Q8N3X1 1017 aaPredicted RBP27.65■■■□□ 2.02
MATR3-221ENST00000513121 RGPD8O14715 1765 aaPredicted RBP27.64■■■□□ 2.02
MATR3-221ENST00000513121 PSME1Q06323 249 aa27.64■■■□□ 2.02
MATR3-221ENST00000513121 KIF1AQ12756 1690 aa27.63■■■□□ 2.01
MATR3-221ENST00000513121 USP21Q9UK80 565 aa27.63■■■□□ 2.01
MATR3-221ENST00000513121 CABLES1Q8TDN4 633 aa27.62■■■□□ 2.01
MATR3-221ENST00000513121 PLEKHG5O94827 1062 aa27.6■■■□□ 2.01
MATR3-221ENST00000513121 CDK19Q9BWU1 502 aa27.6■■■□□ 2.01
MATR3-221ENST00000513121 SBNO1A3KN83 1393 aa27.6■■■□□ 2.01
MATR3-221ENST00000513121 TNS3Q68CZ2 1445 aa27.59■■■□□ 2.01
MATR3-221ENST00000513121 TULP4Q9NRJ4 1543 aa27.59■■■□□ 2.01
MATR3-221ENST00000513121 RBM6P78332 1123 aaKnown RBP27.59■■■□□ 2.01
MATR3-221ENST00000513121 NUDT16Q96DE0 195 aaKnown RBP27.59■■■□□ 2.01
MATR3-221ENST00000513121 ARHGEF28Q8N1W1 1705 aaKnown RBP27.58■■■□□ 2.01
MATR3-221ENST00000513121 LMOD2Q6P5Q4 547 aa27.58■■■□□ 2.01
MATR3-221ENST00000513121 TRIM26Q12899 539 aaPredicted RBP27.57■■■□□ 2
MATR3-221ENST00000513121 EIF3AQ14152 1382 aaKnown RBP27.57■■■□□ 2
MATR3-221ENST00000513121 KIAA1210Q9ULL0 1709 aa27.55■■■□□ 2
MATR3-221ENST00000513121 BCL9LQ86UU0 1499 aa27.55■■■□□ 2
MATR3-221ENST00000513121 NGDNQ8NEJ9 315 aaKnown RBP27.54■■■□□ 2
MATR3-221ENST00000513121 TRPC5Q9UL62 973 aaPredicted RBP27.54■■■□□ 2
MATR3-221ENST00000513121 ATP7BP35670 1465 aa27.53■■■□□ 2
MATR3-221ENST00000513121 CDK12Q9NYV4 1490 aaPredicted RBP27.53■■■□□ 2
MATR3-221ENST00000513121 RGS12O14924 1447 aa27.52■■■□□ 2
MATR3-221ENST00000513121 ATRNO75882 1429 aa27.52■■■□□ 2
MATR3-221ENST00000513121 NBPF8Q3BBV2 869 aa27.52■■■□□ 2
MATR3-221ENST00000513121 GPRASP1Q5JY77 1395 aa27.5■■□□□ 1.99
MATR3-221ENST00000513121 CENPJQ9HC77 1338 aaPredicted RBP27.5■■□□□ 1.99
MATR3-221ENST00000513121 ARHGEF10O15013 1369 aa27.49■■□□□ 1.99
MATR3-221ENST00000513121 UPF1Q92900 1129 aaKnown RBP eCLIP27.49■■□□□ 1.99
MATR3-221ENST00000513121 HAP1P54257 671 aaPredicted RBP27.47■■□□□ 1.99
MATR3-221ENST00000513121 CCDC61Q9Y6R9 512 aa27.47■■□□□ 1.99
MATR3-221ENST00000513121 UNC5CLQ8IV45 518 aa27.46■■□□□ 1.99
MATR3-221ENST00000513121 CABP2Q9NPB3 220 aa27.46■■□□□ 1.99
MATR3-221ENST00000513121 SLIT2O94813 1529 aa27.46■■□□□ 1.99
MATR3-221ENST00000513121 PAK3O75914 559 aaPredicted RBP27.45■■□□□ 1.98
MATR3-221ENST00000513121 PLEKHG3A1L390 1219 aa27.44■■□□□ 1.98
MATR3-221ENST00000513121 FAM83GA6ND36 823 aa27.44■■□□□ 1.98
MATR3-221ENST00000513121 TRPM3Q9HCF6 1732 aaPredicted RBP27.44■■□□□ 1.98
MATR3-221ENST00000513121 ACEP12821 1306 aa27.43■■□□□ 1.98
MATR3-221ENST00000513121 GJD4Q96KN9 370 aaPredicted RBP27.43■■□□□ 1.98
MATR3-221ENST00000513121 SRPK2P78362 688 aaKnown RBP27.42■■□□□ 1.98
MATR3-221ENST00000513121 ROCK2O75116 1388 aaKnown RBP27.42■■□□□ 1.98
MATR3-221ENST00000513121 POLR3AO14802 1390 aaPredicted RBP27.41■■□□□ 1.98
MATR3-221ENST00000513121 MARF1Q9Y4F3 1742 aaKnown RBP27.38■■□□□ 1.97
MATR3-221ENST00000513121 TRPM1Q7Z4N2 1603 aa27.38■■□□□ 1.97
MATR3-221ENST00000513121 NUTM2GQ5VZR2 741 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms