RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 FAM135BQ49AJ0 1406 aa24.86■■□□□ 1.57
DDR1-270ENST00000513043 DLC1Q96QB1 1528 aa24.86■■□□□ 1.57
DDR1-270ENST00000513043 SIRT1Q96EB6 747 aa24.85■■□□□ 1.57
DDR1-270ENST00000513043 CADPS2Q86UW7 1296 aa24.84■■□□□ 1.57
DDR1-270ENST00000513043 TIMELESSQ9UNS1 1208 aa24.83■■□□□ 1.57
DDR1-270ENST00000513043 SLAIN2Q9P270 581 aa24.82■■□□□ 1.56
DDR1-270ENST00000513043 ARHGEF28Q8N1W1 1705 aaKnown RBP24.81■■□□□ 1.56
DDR1-270ENST00000513043 DCCP43146 1447 aa24.81■■□□□ 1.56
DDR1-270ENST00000513043 RALGAPBQ86X10 1494 aa24.8■■□□□ 1.56
DDR1-270ENST00000513043 MINK1Q8N4C8 1332 aaPredicted RBP24.79■■□□□ 1.56
DDR1-270ENST00000513043 DISP3Q9P2K9 1392 aa24.79■■□□□ 1.56
DDR1-270ENST00000513043 HIRIP3Q9BW71 556 aaPredicted RBP24.78■■□□□ 1.56
DDR1-270ENST00000513043 CARD11Q9BXL7 1154 aa24.78■■□□□ 1.56
DDR1-270ENST00000513043 NUTM2FA1L443 756 aa24.76■■□□□ 1.55
DDR1-270ENST00000513043 HSPA1LP34931 641 aa24.76■■□□□ 1.55
DDR1-270ENST00000513043 GPRASP1Q5JY77 1395 aa24.76■■□□□ 1.55
DDR1-270ENST00000513043 MST1RQ04912 1400 aa24.76■■□□□ 1.55
DDR1-270ENST00000513043 CDC42BPGQ6DT37 1551 aa24.75■■□□□ 1.55
DDR1-270ENST00000513043 ROBO1Q9Y6N7 1651 aa24.73■■□□□ 1.55
DDR1-270ENST00000513043 CENPJQ9HC77 1338 aaPredicted RBP24.72■■□□□ 1.55
DDR1-270ENST00000513043 C1orf167Q5SNV9 1468 aa24.7■■□□□ 1.55
DDR1-270ENST00000513043 BRINP3Q76B58 766 aa24.69■■□□□ 1.54
DDR1-270ENST00000513043 EIF3AQ14152 1382 aaKnown RBP24.67■■□□□ 1.54
DDR1-270ENST00000513043 ADGRB2O60241 1585 aa24.67■■□□□ 1.54
DDR1-270ENST00000513043 FMN2Q9NZ56 1722 aa24.67■■□□□ 1.54
DDR1-270ENST00000513043 ORAI2Q96SN7 254 aa24.67■■□□□ 1.54
DDR1-270ENST00000513043 QRICH2Q9H0J4 1663 aa24.66■■□□□ 1.54
DDR1-270ENST00000513043 ILDR2Q71H61 639 aa24.66■■□□□ 1.54
DDR1-270ENST00000513043 WASLO00401 505 aaPredicted RBP24.65■■□□□ 1.54
DDR1-270ENST00000513043 ESCO1Q5FWF5 840 aa24.64■■□□□ 1.54
DDR1-270ENST00000513043 DDX17Q92841 729 aaKnown RBP24.63■■□□□ 1.53
DDR1-270ENST00000513043 CDK19Q9BWU1 502 aa24.62■■□□□ 1.53
DDR1-270ENST00000513043 PRR36Q9H6K5 1346 aa24.59■■□□□ 1.53
DDR1-270ENST00000513043 USP47Q96K76 1375 aa24.58■■□□□ 1.53
DDR1-270ENST00000513043 TULP4Q9NRJ4 1543 aa24.58■■□□□ 1.53
DDR1-270ENST00000513043 USP32Q8NFA0 1604 aa24.57■■□□□ 1.52
DDR1-270ENST00000513043 RGPD8O14715 1765 aaPredicted RBP24.57■■□□□ 1.52
DDR1-270ENST00000513043 ST20-MTHFSA0A0A6YYL1 179 aa24.57■■□□□ 1.52
DDR1-270ENST00000513043 SRPK2P78362 688 aaKnown RBP24.57■■□□□ 1.52
DDR1-270ENST00000513043 PHLPP1O60346 1717 aa24.57■■□□□ 1.52
DDR1-270ENST00000513043 ANKARQ7Z5J8 1434 aa24.56■■□□□ 1.52
DDR1-270ENST00000513043 CABP2Q9NPB3 220 aa24.56■■□□□ 1.52
DDR1-270ENST00000513043 NUDT16Q96DE0 195 aaKnown RBP24.55■■□□□ 1.52
DDR1-270ENST00000513043 MED1Q15648 1581 aaPredicted RBP24.54■■□□□ 1.52
DDR1-270ENST00000513043 AHDC1Q5TGY3 1603 aaPredicted RBP24.54■■□□□ 1.52
DDR1-270ENST00000513043 FOXO3O43524 673 aa24.54■■□□□ 1.52
DDR1-270ENST00000513043 PMFBP1Q8TBY8 1022 aa24.54■■□□□ 1.52
DDR1-270ENST00000513043 PHF8Q9UPP1 1060 aa24.54■■□□□ 1.52
DDR1-270ENST00000513043 EVC2Q86UK5 1308 aa24.54■■□□□ 1.52
DDR1-270ENST00000513043 ATP7BP35670 1465 aa24.53■■□□□ 1.52
DDR1-270ENST00000513043 XPCQ01831 940 aaPredicted RBP24.53■■□□□ 1.52
DDR1-270ENST00000513043 NHSL1Q5SYE7 1610 aa24.53■■□□□ 1.52
DDR1-270ENST00000513043 COL16A1Q07092 1604 aaPredicted RBP24.5■■□□□ 1.51
DDR1-270ENST00000513043 SBNO2Q9Y2G9 1366 aa24.5■■□□□ 1.51
DDR1-270ENST00000513043 TESK2Q96S53 571 aa24.49■■□□□ 1.51
DDR1-270ENST00000513043 NPHP3Q7Z494 1330 aa24.49■■□□□ 1.51
DDR1-270ENST00000513043 KIF1AQ12756 1690 aa24.49■■□□□ 1.51
DDR1-270ENST00000513043 CCDC61Q9Y6R9 512 aa24.47■■□□□ 1.51
DDR1-270ENST00000513043 SOS2Q07890 1332 aaPredicted RBP24.45■■□□□ 1.5
DDR1-270ENST00000513043 ITSN1Q15811 1721 aa24.45■■□□□ 1.5
DDR1-270ENST00000513043 NGDNQ8NEJ9 315 aaKnown RBP24.45■■□□□ 1.5
DDR1-270ENST00000513043 EIF4G2P78344 907 aaKnown RBP eCLIP24.44■■□□□ 1.5
DDR1-270ENST00000513043 KRT28Q7Z3Y7 464 aa24.44■■□□□ 1.5
DDR1-270ENST00000513043 PXDNQ92626 1479 aa24.44■■□□□ 1.5
DDR1-270ENST00000513043 PPIP5K1Q6PFW1 1433 aa24.44■■□□□ 1.5
DDR1-270ENST00000513043 TOPAZ1Q8N9V7 1692 aa24.43■■□□□ 1.5
DDR1-270ENST00000513043 HSPA5P11021 654 aaKnown RBP24.43■■□□□ 1.5
DDR1-270ENST00000513043 PSME1Q06323 249 aa24.43■■□□□ 1.5
DDR1-270ENST00000513043 LRRC59Q96AG4 307 aaKnown RBP24.42■■□□□ 1.5
DDR1-270ENST00000513043 JCADQ9P266 1359 aa24.42■■□□□ 1.5
DDR1-270ENST00000513043 SOCS7O14512 581 aa24.41■■□□□ 1.5
DDR1-270ENST00000513043 CABP1Q9NZU7 370 aa24.41■■□□□ 1.5
DDR1-270ENST00000513043 ACEP12821 1306 aa24.39■■□□□ 1.5
DDR1-270ENST00000513043 PLEKHG3A1L390 1219 aa24.39■■□□□ 1.49
DDR1-270ENST00000513043 TMF1P82094 1093 aa24.39■■□□□ 1.49
DDR1-270ENST00000513043 ATAD2Q6PL18 1390 aa24.39■■□□□ 1.49
DDR1-270ENST00000513043 SLC24A1O60721 1099 aa24.36■■□□□ 1.49
DDR1-270ENST00000513043 TMC1Q8TDI8 760 aa24.36■■□□□ 1.49
DDR1-270ENST00000513043 PNPLA6Q8IY17 1366 aa24.36■■□□□ 1.49
DDR1-270ENST00000513043 POLR3AO14802 1390 aaPredicted RBP24.35■■□□□ 1.49
DDR1-270ENST00000513043 LMOD2Q6P5Q4 547 aa24.35■■□□□ 1.49
DDR1-270ENST00000513043 PAK3O75914 559 aaPredicted RBP24.34■■□□□ 1.49
DDR1-270ENST00000513043 PLEKHG5O94827 1062 aa24.34■■□□□ 1.49
DDR1-270ENST00000513043 PHF23Q9BUL5 403 aaPredicted RBP24.34■■□□□ 1.49
DDR1-270ENST00000513043 SPATA31A3Q5VYP0 1347 aa24.34■■□□□ 1.49
DDR1-270ENST00000513043 NUTM2BA6NNL0 878 aaPredicted RBP24.33■■□□□ 1.49
DDR1-270ENST00000513043 NUTM2EB1AL46 878 aaPredicted RBP24.33■■□□□ 1.49
DDR1-270ENST00000513043 NUTM2AQ8IVF1 878 aaPredicted RBP24.33■■□□□ 1.49
DDR1-270ENST00000513043 SHPRHQ149N8 1683 aa24.33■■□□□ 1.49
DDR1-270ENST00000513043 SLC12A5Q9H2X9 1139 aa24.32■■□□□ 1.48
DDR1-270ENST00000513043 TNS3Q68CZ2 1445 aa24.32■■□□□ 1.48
DDR1-270ENST00000513043 SBNO1A3KN83 1393 aa24.31■■□□□ 1.48
DDR1-270ENST00000513043 POLR3GLQ9BT43 218 aa24.31■■□□□ 1.48
DDR1-270ENST00000513043 PUS7Q96PZ0 661 aaKnown RBP24.3■■□□□ 1.48
DDR1-270ENST00000513043 TRPM3Q9HCF6 1732 aaPredicted RBP24.3■■□□□ 1.48
DDR1-270ENST00000513043 SPATA31A6Q5VVP1 1343 aa24.29■■□□□ 1.48
DDR1-270ENST00000513043 CDCA8Q53HL2 280 aa24.28■■□□□ 1.48
DDR1-270ENST00000513043 LRP6O75581 1613 aa24.26■■□□□ 1.47
DDR1-270ENST00000513043 USP6P35125 1406 aa24.26■■□□□ 1.47
DDR1-270ENST00000513043 NUTM2GQ5VZR2 741 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms