RNA–Protein interactions for RNA: ENST00000512985.1

CDK7-209, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-209ENST00000512985 WAPLQ7Z5K2 1190 aa18.18■□□□□ 0.5
CDK7-209ENST00000512985 NALCNQ8IZF0 1738 aa18.18■□□□□ 0.5
CDK7-209ENST00000512985 TRPM1Q7Z4N2 1603 aa18.17■□□□□ 0.5
CDK7-209ENST00000512985 EIF3AQ14152 1382 aaKnown RBP18.17■□□□□ 0.5
CDK7-209ENST00000512985 NBPF1Q3BBV0 1214 aa18.15■□□□□ 0.5
CDK7-209ENST00000512985 CDC42BPGQ6DT37 1551 aa18.15■□□□□ 0.5
CDK7-209ENST00000512985 SAFB2Q14151 953 aaKnown RBP eCLIP18.13■□□□□ 0.49
CDK7-209ENST00000512985 PLEKHH1Q9ULM0 1364 aa18.13■□□□□ 0.49
CDK7-209ENST00000512985 RALGAPBQ86X10 1494 aa18.13■□□□□ 0.49
CDK7-209ENST00000512985 NBPF8Q3BBV2 869 aa18.12■□□□□ 0.49
CDK7-209ENST00000512985 CARD11Q9BXL7 1154 aa18.12■□□□□ 0.49
CDK7-209ENST00000512985 ARHGEF28Q8N1W1 1705 aaKnown RBP18.12■□□□□ 0.49
CDK7-209ENST00000512985 GPRASP1Q5JY77 1395 aa18.11■□□□□ 0.49
CDK7-209ENST00000512985 MST1RQ04912 1400 aa18.11■□□□□ 0.49
CDK7-209ENST00000512985 ROBO1Q9Y6N7 1651 aa18.11■□□□□ 0.49
CDK7-209ENST00000512985 CENPJQ9HC77 1338 aaPredicted RBP18.1■□□□□ 0.49
CDK7-209ENST00000512985 ADGRB2O60241 1585 aa18.08■□□□□ 0.49
CDK7-209ENST00000512985 C1orf167Q5SNV9 1468 aa18.08■□□□□ 0.49
CDK7-209ENST00000512985 MINK1Q8N4C8 1332 aaPredicted RBP18.08■□□□□ 0.49
CDK7-209ENST00000512985 SLC24A1O60721 1099 aa18.07■□□□□ 0.48
CDK7-209ENST00000512985 HSPA1LP34931 641 aa18.06■□□□□ 0.48
CDK7-209ENST00000512985 BRINP3Q76B58 766 aa18.06■□□□□ 0.48
CDK7-209ENST00000512985 WASLO00401 505 aaPredicted RBP18.05■□□□□ 0.48
CDK7-209ENST00000512985 ESCO1Q5FWF5 840 aa18.05■□□□□ 0.48
CDK7-209ENST00000512985 HIRIP3Q9BW71 556 aaPredicted RBP18.05■□□□□ 0.48
CDK7-209ENST00000512985 ANKARQ7Z5J8 1434 aa18.05■□□□□ 0.48
CDK7-209ENST00000512985 FMN2Q9NZ56 1722 aa18.04■□□□□ 0.48
CDK7-209ENST00000512985 AHDC1Q5TGY3 1603 aaPredicted RBP18.01■□□□□ 0.47
CDK7-209ENST00000512985 NPHP3Q7Z494 1330 aa18.01■□□□□ 0.47
CDK7-209ENST00000512985 EVC2Q86UK5 1308 aa18.01■□□□□ 0.47
CDK7-209ENST00000512985 PHLPP1O60346 1717 aa18.01■□□□□ 0.47
CDK7-209ENST00000512985 NUTM2FA1L443 756 aa18.01■□□□□ 0.47
CDK7-209ENST00000512985 QRICH2Q9H0J4 1663 aa18.01■□□□□ 0.47
CDK7-209ENST00000512985 TULP4Q9NRJ4 1543 aa18.01■□□□□ 0.47
CDK7-209ENST00000512985 KIF1AQ12756 1690 aa18■□□□□ 0.47
CDK7-209ENST00000512985 ORAI2Q96SN7 254 aa17.99■□□□□ 0.47
CDK7-209ENST00000512985 CDK19Q9BWU1 502 aa17.99■□□□□ 0.47
CDK7-209ENST00000512985 SBNO2Q9Y2G9 1366 aa17.99■□□□□ 0.47
CDK7-209ENST00000512985 SRPK2P78362 688 aaKnown RBP17.98■□□□□ 0.47
CDK7-209ENST00000512985 PHF8Q9UPP1 1060 aa17.98■□□□□ 0.47
CDK7-209ENST00000512985 NHSL1Q5SYE7 1610 aa17.98■□□□□ 0.47
CDK7-209ENST00000512985 LRRC59Q96AG4 307 aaKnown RBP17.97■□□□□ 0.47
CDK7-209ENST00000512985 ITSN1Q15811 1721 aa17.95■□□□□ 0.46
CDK7-209ENST00000512985 USP47Q96K76 1375 aa17.95■□□□□ 0.46
CDK7-209ENST00000512985 JCADQ9P266 1359 aa17.95■□□□□ 0.46
CDK7-209ENST00000512985 PSME1Q06323 249 aa17.95■□□□□ 0.46
CDK7-209ENST00000512985 NUDT16Q96DE0 195 aaKnown RBP17.95■□□□□ 0.46
CDK7-209ENST00000512985 CCDC61Q9Y6R9 512 aa17.95■□□□□ 0.46
CDK7-209ENST00000512985 FOXO3O43524 673 aa17.94■□□□□ 0.46
CDK7-209ENST00000512985 COL16A1Q07092 1604 aaPredicted RBP17.94■□□□□ 0.46
CDK7-209ENST00000512985 NGDNQ8NEJ9 315 aaKnown RBP17.93■□□□□ 0.46
CDK7-209ENST00000512985 ST20-MTHFSA0A0A6YYL1 179 aa17.92■□□□□ 0.46
CDK7-209ENST00000512985 ATP7BP35670 1465 aa17.92■□□□□ 0.46
CDK7-209ENST00000512985 SOS2Q07890 1332 aaPredicted RBP17.92■□□□□ 0.46
CDK7-209ENST00000512985 ATAD2Q6PL18 1390 aa17.91■□□□□ 0.46
CDK7-209ENST00000512985 USP32Q8NFA0 1604 aa17.91■□□□□ 0.46
CDK7-209ENST00000512985 RGPD8O14715 1765 aaPredicted RBP17.9■□□□□ 0.46
CDK7-209ENST00000512985 CDCA8Q53HL2 280 aa17.9■□□□□ 0.46
CDK7-209ENST00000512985 PMFBP1Q8TBY8 1022 aa17.9■□□□□ 0.46
CDK7-209ENST00000512985 PUS7Q96PZ0 661 aaKnown RBP17.9■□□□□ 0.46
CDK7-209ENST00000512985 CABP2Q9NPB3 220 aa17.9■□□□□ 0.46
CDK7-209ENST00000512985 SPATA31A6Q5VVP1 1343 aa17.9■□□□□ 0.46
CDK7-209ENST00000512985 PRR36Q9H6K5 1346 aa17.9■□□□□ 0.46
CDK7-209ENST00000512985 EIF4G2P78344 907 aaKnown RBP eCLIP17.89■□□□□ 0.45
CDK7-209ENST00000512985 TMF1P82094 1093 aa17.89■□□□□ 0.45
CDK7-209ENST00000512985 KRT28Q7Z3Y7 464 aa17.89■□□□□ 0.45
CDK7-209ENST00000512985 PLEKHG3A1L390 1219 aa17.88■□□□□ 0.45
CDK7-209ENST00000512985 DDX17Q92841 729 aaKnown RBP17.88■□□□□ 0.45
CDK7-209ENST00000512985 PPIP5K1Q6PFW1 1433 aa17.88■□□□□ 0.45
CDK7-209ENST00000512985 SHPRHQ149N8 1683 aa17.87■□□□□ 0.45
CDK7-209ENST00000512985 PXDNQ92626 1479 aa17.87■□□□□ 0.45
CDK7-209ENST00000512985 SBNO1A3KN83 1393 aa17.86■□□□□ 0.45
CDK7-209ENST00000512985 TOPAZ1Q8N9V7 1692 aa17.86■□□□□ 0.45
CDK7-209ENST00000512985 ARHGEF10O15013 1369 aa17.85■□□□□ 0.45
CDK7-209ENST00000512985 POLR3AO14802 1390 aaPredicted RBP17.84■□□□□ 0.45
CDK7-209ENST00000512985 BRD4O60885 1362 aaPredicted RBP17.84■□□□□ 0.45
CDK7-209ENST00000512985 ACEP12821 1306 aa17.84■□□□□ 0.45
CDK7-209ENST00000512985 XPCQ01831 940 aaPredicted RBP17.84■□□□□ 0.45
CDK7-209ENST00000512985 TESK2Q96S53 571 aa17.84■□□□□ 0.45
CDK7-209ENST00000512985 NINLQ9Y2I6 1382 aa17.83■□□□□ 0.45
CDK7-209ENST00000512985 ZNF692Q9BU19 519 aaPredicted RBP17.83■□□□□ 0.44
CDK7-209ENST00000512985 CABP1Q9NZU7 370 aa17.83■□□□□ 0.44
CDK7-209ENST00000512985 TNS3Q68CZ2 1445 aa17.82■□□□□ 0.44
CDK7-209ENST00000512985 PNPLA6Q8IY17 1366 aa17.82■□□□□ 0.44
CDK7-209ENST00000512985 SPATA31A3Q5VYP0 1347 aa17.82■□□□□ 0.44
CDK7-209ENST00000512985 LMOD2Q6P5Q4 547 aa17.82■□□□□ 0.44
CDK7-209ENST00000512985 PAK3O75914 559 aaPredicted RBP17.81■□□□□ 0.44
CDK7-209ENST00000512985 MEX3CQ5U5Q3 659 aaKnown RBP17.81■□□□□ 0.44
CDK7-209ENST00000512985 HDGFL2Q7Z4V5 671 aaPredicted RBP17.8■□□□□ 0.44
CDK7-209ENST00000512985 TMC1Q8TDI8 760 aa17.8■□□□□ 0.44
CDK7-209ENST00000512985 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
CDK7-209ENST00000512985 MED1Q15648 1581 aaPredicted RBP17.79■□□□□ 0.44
CDK7-209ENST00000512985 HAP1P54257 671 aaPredicted RBP17.79■□□□□ 0.44
CDK7-209ENST00000512985 TERF2IPQ9NYB0 399 aa17.79■□□□□ 0.44
CDK7-209ENST00000512985 NUTM2BA6NNL0 878 aaPredicted RBP17.78■□□□□ 0.44
CDK7-209ENST00000512985 NUTM2EB1AL46 878 aaPredicted RBP17.78■□□□□ 0.44
CDK7-209ENST00000512985 HSPA5P11021 654 aaKnown RBP17.78■□□□□ 0.44
CDK7-209ENST00000512985 ZEB1P37275 1124 aaPredicted RBP17.78■□□□□ 0.44
CDK7-209ENST00000512985 NUTM2AQ8IVF1 878 aaPredicted RBP17.78■□□□□ 0.44
CDK7-209ENST00000512985 COL22A1Q8NFW1 1626 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms