RNA–Protein interactions for RNA: ENST00000512694.5

DDR1-268, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-268ENST00000512694 USP21Q9UK80 565 aa23.95■■□□□ 1.42
DDR1-268ENST00000512694 IFT172Q9UG01 1749 aa23.95■■□□□ 1.42
DDR1-268ENST00000512694 RPGRIP1LQ68CZ1 1315 aa23.94■■□□□ 1.42
DDR1-268ENST00000512694 XPCQ01831 940 aaPredicted RBP23.93■■□□□ 1.42
DDR1-268ENST00000512694 ESCO1Q5FWF5 840 aa23.92■■□□□ 1.42
DDR1-268ENST00000512694 NUTM2FA1L443 756 aa23.91■■□□□ 1.42
DDR1-268ENST00000512694 STK26Q9P289 416 aa23.91■■□□□ 1.42
DDR1-268ENST00000512694 EP400Q96L91 3159 aa23.9■■□□□ 1.42
DDR1-268ENST00000512694 PXDNQ92626 1479 aa23.9■■□□□ 1.42
DDR1-268ENST00000512694 ADGRF5Q8IZF2 1346 aa23.89■■□□□ 1.42
DDR1-268ENST00000512694 TRPC5Q9UL62 973 aaPredicted RBP23.89■■□□□ 1.41
DDR1-268ENST00000512694 KNDC1Q76NI1 1749 aa23.89■■□□□ 1.41
DDR1-268ENST00000512694 ATAD2Q6PL18 1390 aa23.89■■□□□ 1.41
DDR1-268ENST00000512694 MYOM2P54296 1465 aa23.88■■□□□ 1.41
DDR1-268ENST00000512694 RGL3Q3MIN7 710 aa23.88■■□□□ 1.41
DDR1-268ENST00000512694 RGPD8O14715 1765 aaPredicted RBP23.88■■□□□ 1.41
DDR1-268ENST00000512694 NPHP3Q7Z494 1330 aa23.87■■□□□ 1.41
DDR1-268ENST00000512694 ATRNO75882 1429 aa23.87■■□□□ 1.41
DDR1-268ENST00000512694 FMN2Q9NZ56 1722 aa23.87■■□□□ 1.41
DDR1-268ENST00000512694 CCDC144AA2RUR9 1427 aa23.86■■□□□ 1.41
DDR1-268ENST00000512694 FOXO3O43524 673 aa23.85■■□□□ 1.41
DDR1-268ENST00000512694 WAPLQ7Z5K2 1190 aa23.85■■□□□ 1.41
DDR1-268ENST00000512694 SRCAPQ6ZRS2 3230 aa23.84■■□□□ 1.41
DDR1-268ENST00000512694 FNBP4Q8N3X1 1017 aaPredicted RBP23.84■■□□□ 1.41
DDR1-268ENST00000512694 PLEKHH1Q9ULM0 1364 aa23.83■■□□□ 1.41
DDR1-268ENST00000512694 TMEM132EQ6IEE7 984 aa23.82■■□□□ 1.4
DDR1-268ENST00000512694 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.81■■□□□ 1.4
DDR1-268ENST00000512694 KIF1AQ12756 1690 aa23.81■■□□□ 1.4
DDR1-268ENST00000512694 SPATA31E1Q6ZUB1 1445 aa23.81■■□□□ 1.4
DDR1-268ENST00000512694 ACIN1Q9UKV3 1341 aaKnown RBP23.81■■□□□ 1.4
DDR1-268ENST00000512694 BCL9LQ86UU0 1499 aa23.81■■□□□ 1.4
DDR1-268ENST00000512694 LRPPRCP42704 1394 aaKnown RBP23.8■■□□□ 1.4
DDR1-268ENST00000512694 TECPR2O15040 1411 aa23.8■■□□□ 1.4
DDR1-268ENST00000512694 BRWD3Q6RI45 1802 aa23.79■■□□□ 1.4
DDR1-268ENST00000512694 ANKRD30BQ9BXX2 1392 aa23.78■■□□□ 1.4
DDR1-268ENST00000512694 USP32Q8NFA0 1604 aa23.77■■□□□ 1.4
DDR1-268ENST00000512694 PIK3C2GO75747 1445 aa23.76■■□□□ 1.39
DDR1-268ENST00000512694 PLEKHG5O94827 1062 aa23.76■■□□□ 1.39
DDR1-268ENST00000512694 YTHDC2Q9H6S0 1430 aaKnown RBP23.75■■□□□ 1.39
DDR1-268ENST00000512694 GLI3P10071 1580 aa23.74■■□□□ 1.39
DDR1-268ENST00000512694 MPHOSPH9Q99550 1183 aa23.74■■□□□ 1.39
DDR1-268ENST00000512694 ABCC11Q96J66 1382 aa23.74■■□□□ 1.39
DDR1-268ENST00000512694 PLCH1Q4KWH8 1693 aa23.73■■□□□ 1.39
DDR1-268ENST00000512694 ABCA3Q99758 1704 aa23.73■■□□□ 1.39
DDR1-268ENST00000512694 GJD4Q96KN9 370 aaPredicted RBP23.72■■□□□ 1.39
DDR1-268ENST00000512694 RALGAPBQ86X10 1494 aa23.7■■□□□ 1.38
DDR1-268ENST00000512694 SPATA31A3Q5VYP0 1347 aa23.7■■□□□ 1.38
DDR1-268ENST00000512694 SAFB2Q14151 953 aaKnown RBP eCLIP23.69■■□□□ 1.38
DDR1-268ENST00000512694 KRT28Q7Z3Y7 464 aa23.69■■□□□ 1.38
DDR1-268ENST00000512694 SLIT2O94813 1529 aa23.69■■□□□ 1.38
DDR1-268ENST00000512694 HAP1P54257 671 aaPredicted RBP23.68■■□□□ 1.38
DDR1-268ENST00000512694 ZRANB1Q9UGI0 708 aa23.68■■□□□ 1.38
DDR1-268ENST00000512694 UNC5CLQ8IV45 518 aa23.67■■□□□ 1.38
DDR1-268ENST00000512694 TNS3Q68CZ2 1445 aa23.67■■□□□ 1.38
DDR1-268ENST00000512694 CABLES1Q8TDN4 633 aa23.66■■□□□ 1.38
DDR1-268ENST00000512694 NWD2Q9ULI1 1742 aa23.65■■□□□ 1.38
DDR1-268ENST00000512694 LMOD2Q6P5Q4 547 aa23.65■■□□□ 1.38
DDR1-268ENST00000512694 PHF8Q9UPP1 1060 aa23.64■■□□□ 1.37
DDR1-268ENST00000512694 CFAP70Q5T0N1 1121 aa23.63■■□□□ 1.37
DDR1-268ENST00000512694 CCDC125Q86Z20 511 aa23.61■■□□□ 1.37
DDR1-268ENST00000512694 PRAM1Q96QH2 718 aa23.61■■□□□ 1.37
DDR1-268ENST00000512694 CCDC9Q9Y3X0 531 aaKnown RBP23.61■■□□□ 1.37
DDR1-268ENST00000512694 DHX57Q6P158 1386 aaKnown RBP23.61■■□□□ 1.37
DDR1-268ENST00000512694 NRXN1Q9ULB1 1477 aa23.61■■□□□ 1.37
DDR1-268ENST00000512694 C14orf93Q9H972 538 aaKnown RBP23.6■■□□□ 1.37
DDR1-268ENST00000512694 BLMP54132 1417 aaPredicted RBP23.59■■□□□ 1.37
DDR1-268ENST00000512694 PSME1Q06323 249 aa23.58■■□□□ 1.37
DDR1-268ENST00000512694 TRPM3Q9HCF6 1732 aaPredicted RBP23.58■■□□□ 1.37
DDR1-268ENST00000512694 SEPT12Q8IYM1 358 aa23.57■■□□□ 1.36
DDR1-268ENST00000512694 PMFBP1Q8TBY8 1022 aa23.57■■□□□ 1.36
DDR1-268ENST00000512694 NRAPQ86VF7 1730 aa23.56■■□□□ 1.36
DDR1-268ENST00000512694 DEFB132Q7Z7B7 95 aa23.56■■□□□ 1.36
DDR1-268ENST00000512694 SIRT1Q96EB6 747 aa23.56■■□□□ 1.36
DDR1-268ENST00000512694 POGKQ9P215 609 aa23.56■■□□□ 1.36
DDR1-268ENST00000512694 ADGRB2O60241 1585 aa23.56■■□□□ 1.36
DDR1-268ENST00000512694 DLC1Q96QB1 1528 aa23.54■■□□□ 1.36
DDR1-268ENST00000512694 SBNO1A3KN83 1393 aa23.54■■□□□ 1.36
DDR1-268ENST00000512694 ARHGEF10O15013 1369 aa23.54■■□□□ 1.36
DDR1-268ENST00000512694 RAB3GAP2Q9H2M9 1393 aa23.54■■□□□ 1.36
DDR1-268ENST00000512694 A0A0G2JS52 829 aa23.54■■□□□ 1.36
DDR1-268ENST00000512694 MYT1Q01538 1121 aa23.54■■□□□ 1.36
DDR1-268ENST00000512694 VPS72Q15906 364 aa23.54■■□□□ 1.36
DDR1-268ENST00000512694 HIRIP3Q9BW71 556 aaPredicted RBP23.53■■□□□ 1.36
DDR1-268ENST00000512694 ALS2Q96Q42 1657 aa23.53■■□□□ 1.36
DDR1-268ENST00000512694 ADGRB1O14514 1584 aa23.52■■□□□ 1.36
DDR1-268ENST00000512694 ANKARQ7Z5J8 1434 aa23.51■■□□□ 1.35
DDR1-268ENST00000512694 SF3B2Q13435 895 aaKnown RBP23.51■■□□□ 1.35
DDR1-268ENST00000512694 TRAK1Q9UPV9 953 aa23.5■■□□□ 1.35
DDR1-268ENST00000512694 MINK1Q8N4C8 1332 aaPredicted RBP23.5■■□□□ 1.35
DDR1-268ENST00000512694 FAM83GA6ND36 823 aa23.49■■□□□ 1.35
DDR1-268ENST00000512694 CRYBG1Q9Y4K1 1723 aa23.49■■□□□ 1.35
DDR1-268ENST00000512694 COL14A1Q05707 1796 aaKnown RBP23.49■■□□□ 1.35
DDR1-268ENST00000512694 KRT27Q7Z3Y8 459 aa23.48■■□□□ 1.35
DDR1-268ENST00000512694 TULP4Q9NRJ4 1543 aa23.46■■□□□ 1.35
DDR1-268ENST00000512694 KDM2AQ9Y2K7 1162 aa23.46■■□□□ 1.35
DDR1-268ENST00000512694 ITSN1Q15811 1721 aa23.45■■□□□ 1.34
DDR1-268ENST00000512694 FAM98CQ17RN3 349 aaKnown RBP23.45■■□□□ 1.34
DDR1-268ENST00000512694 ARHGEF28Q8N1W1 1705 aaKnown RBP23.45■■□□□ 1.34
DDR1-268ENST00000512694 GPRASP1Q5JY77 1395 aa23.44■■□□□ 1.34
DDR1-268ENST00000512694 PRR36Q9H6K5 1346 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms