RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 COL22A1Q8NFW1 1626 aaPredicted RBP19.14■□□□□ 0.65
DDX41-215ENST00000512431 SF3B2Q13435 895 aaKnown RBP19.13■□□□□ 0.65
DDX41-215ENST00000512431 HFM1A2PYH4 1435 aa19.13■□□□□ 0.65
DDX41-215ENST00000512431 MYOM2P54296 1465 aa19.12■□□□□ 0.65
DDX41-215ENST00000512431 LRPPRCP42704 1394 aaKnown RBP19.12■□□□□ 0.65
DDX41-215ENST00000512431 FOXO3O43524 673 aa19.11■□□□□ 0.65
DDX41-215ENST00000512431 CLTCL1P53675 1640 aa19.11■□□□□ 0.65
DDX41-215ENST00000512431 EP400Q96L91 3159 aa19.1■□□□□ 0.65
DDX41-215ENST00000512431 BLMP54132 1417 aaPredicted RBP19.1■□□□□ 0.65
DDX41-215ENST00000512431 RPGRIP1LQ68CZ1 1315 aa19.09■□□□□ 0.65
DDX41-215ENST00000512431 XPCQ01831 940 aaPredicted RBP19.09■□□□□ 0.65
DDX41-215ENST00000512431 UNC5CLQ8IV45 518 aa19.09■□□□□ 0.65
DDX41-215ENST00000512431 KIF1BO60333 1816 aa19.08■□□□□ 0.64
DDX41-215ENST00000512431 PRAG1Q86YV5 1406 aa19.08■□□□□ 0.64
DDX41-215ENST00000512431 PXDNQ92626 1479 aa19.06■□□□□ 0.64
DDX41-215ENST00000512431 DEFB132Q7Z7B7 95 aa19.05■□□□□ 0.64
DDX41-215ENST00000512431 HAP1P54257 671 aaPredicted RBP19.04■□□□□ 0.64
DDX41-215ENST00000512431 MARF1Q9Y4F3 1742 aaKnown RBP19.04■□□□□ 0.64
DDX41-215ENST00000512431 RALGAPBQ86X10 1494 aa19.03■□□□□ 0.64
DDX41-215ENST00000512431 NUTM2FA1L443 756 aa19.03■□□□□ 0.64
DDX41-215ENST00000512431 CDC42BPGQ6DT37 1551 aa19.02■□□□□ 0.64
DDX41-215ENST00000512431 SEPT12Q8IYM1 358 aa19.02■□□□□ 0.64
DDX41-215ENST00000512431 CCDC9Q9Y3X0 531 aaKnown RBP19.01■□□□□ 0.63
DDX41-215ENST00000512431 TNKS1BP1Q9C0C2 1729 aaKnown RBP19■□□□□ 0.63
DDX41-215ENST00000512431 STK26Q9P289 416 aa19■□□□□ 0.63
DDX41-215ENST00000512431 SLIT2O94813 1529 aa19■□□□□ 0.63
DDX41-215ENST00000512431 NAIPQ13075 1403 aa19■□□□□ 0.63
DDX41-215ENST00000512431 SPATA31A3Q5VYP0 1347 aa19■□□□□ 0.63
DDX41-215ENST00000512431 GLI3P10071 1580 aa18.98■□□□□ 0.63
DDX41-215ENST00000512431 VPS72Q15906 364 aa18.98■□□□□ 0.63
DDX41-215ENST00000512431 KRT28Q7Z3Y7 464 aa18.98■□□□□ 0.63
DDX41-215ENST00000512431 KRT27Q7Z3Y8 459 aa18.98■□□□□ 0.63
DDX41-215ENST00000512431 BAG6P46379 1132 aa18.97■□□□□ 0.63
DDX41-215ENST00000512431 PSME1Q06323 249 aa18.97■□□□□ 0.63
DDX41-215ENST00000512431 WAPLQ7Z5K2 1190 aa18.97■□□□□ 0.63
DDX41-215ENST00000512431 CCDC144AA2RUR9 1427 aa18.97■□□□□ 0.63
DDX41-215ENST00000512431 A0A0G2JS52 829 aa18.95■□□□□ 0.62
DDX41-215ENST00000512431 MYT1Q01538 1121 aa18.95■□□□□ 0.62
DDX41-215ENST00000512431 SLC4A1APQ9BWU0 796 aaKnown RBP18.95■□□□□ 0.62
DDX41-215ENST00000512431 ONECUT3O60422 494 aaPredicted RBP18.94■□□□□ 0.62
DDX41-215ENST00000512431 PPARGC1BQ86YN6 1023 aaKnown RBP18.94■□□□□ 0.62
DDX41-215ENST00000512431 LRP5O75197 1615 aa18.93■□□□□ 0.62
DDX41-215ENST00000512431 PSDA5PKW4 1024 aaPredicted RBP18.93■□□□□ 0.62
DDX41-215ENST00000512431 PLEKHG5O94827 1062 aa18.93■□□□□ 0.62
DDX41-215ENST00000512431 PPLO60437 1756 aa18.92■□□□□ 0.62
DDX41-215ENST00000512431 LMOD2Q6P5Q4 547 aa18.92■□□□□ 0.62
DDX41-215ENST00000512431 USP32Q8NFA0 1604 aa18.92■□□□□ 0.62
DDX41-215ENST00000512431 BRWD3Q6RI45 1802 aa18.91■□□□□ 0.62
DDX41-215ENST00000512431 CABLES1Q8TDN4 633 aa18.91■□□□□ 0.62
DDX41-215ENST00000512431 ADGRF5Q8IZF2 1346 aa18.91■□□□□ 0.62
DDX41-215ENST00000512431 ABCC11Q96J66 1382 aa18.91■□□□□ 0.62
DDX41-215ENST00000512431 TECPR2O15040 1411 aa18.91■□□□□ 0.62
DDX41-215ENST00000512431 KIF1AQ12756 1690 aa18.9■□□□□ 0.62
DDX41-215ENST00000512431 HRCP23327 699 aa18.9■□□□□ 0.62
DDX41-215ENST00000512431 PHF8Q9UPP1 1060 aa18.9■□□□□ 0.62
DDX41-215ENST00000512431 RGL3Q3MIN7 710 aa18.89■□□□□ 0.61
DDX41-215ENST00000512431 TMEM132EQ6IEE7 984 aa18.89■□□□□ 0.61
DDX41-215ENST00000512431 TNS3Q68CZ2 1445 aa18.89■□□□□ 0.61
DDX41-215ENST00000512431 RRBP1Q9P2E9 1410 aaKnown RBP18.89■□□□□ 0.61
DDX41-215ENST00000512431 ARHGEF10O15013 1369 aa18.87■□□□□ 0.61
DDX41-215ENST00000512431 ANKRD30BQ9BXX2 1392 aa18.87■□□□□ 0.61
DDX41-215ENST00000512431 PLEKHH1Q9ULM0 1364 aa18.87■□□□□ 0.61
DDX41-215ENST00000512431 FMN2Q9NZ56 1722 aa18.86■□□□□ 0.61
DDX41-215ENST00000512431 SBNO1A3KN83 1393 aa18.85■□□□□ 0.61
DDX41-215ENST00000512431 FAM83GA6ND36 823 aa18.85■□□□□ 0.61
DDX41-215ENST00000512431 FAM98CQ17RN3 349 aaKnown RBP18.85■□□□□ 0.61
DDX41-215ENST00000512431 SIRT1Q96EB6 747 aa18.85■□□□□ 0.61
DDX41-215ENST00000512431 NWD2Q9ULI1 1742 aa18.85■□□□□ 0.61
DDX41-215ENST00000512431 EN1Q05925 392 aaPredicted RBP18.84■□□□□ 0.61
DDX41-215ENST00000512431 YTHDC2Q9H6S0 1430 aaKnown RBP18.83■□□□□ 0.6
DDX41-215ENST00000512431 PLCH1Q4KWH8 1693 aa18.82■□□□□ 0.6
DDX41-215ENST00000512431 R3HDM1Q15032 1099 aaKnown RBP18.82■□□□□ 0.6
DDX41-215ENST00000512431 BTG4Q9NY30 223 aa18.82■□□□□ 0.6
DDX41-215ENST00000512431 KNDC1Q76NI1 1749 aa18.81■□□□□ 0.6
DDX41-215ENST00000512431 NRXN1Q9ULB1 1477 aa18.79■□□□□ 0.6
DDX41-215ENST00000512431 DHX57Q6P158 1386 aaKnown RBP18.79■□□□□ 0.6
DDX41-215ENST00000512431 PIK3C2GO75747 1445 aa18.78■□□□□ 0.6
DDX41-215ENST00000512431 PMFBP1Q8TBY8 1022 aa18.78■□□□□ 0.6
DDX41-215ENST00000512431 SAFB2Q14151 953 aaKnown RBP eCLIP18.77■□□□□ 0.6
DDX41-215ENST00000512431 FAM182BQ5T319 152 aa18.77■□□□□ 0.6
DDX41-215ENST00000512431 SPATA31E1Q6ZUB1 1445 aa18.76■□□□□ 0.59
DDX41-215ENST00000512431 PRAM1Q96QH2 718 aa18.75■□□□□ 0.59
DDX41-215ENST00000512431 C14orf93Q9H972 538 aaKnown RBP18.75■□□□□ 0.59
DDX41-215ENST00000512431 POGKQ9P215 609 aa18.75■□□□□ 0.59
DDX41-215ENST00000512431 GPRASP1Q5JY77 1395 aa18.75■□□□□ 0.59
DDX41-215ENST00000512431 RGPD1P0DJD0 1748 aa18.74■□□□□ 0.59
DDX41-215ENST00000512431 IFT172Q9UG01 1749 aa18.74■□□□□ 0.59
DDX41-215ENST00000512431 RGPD8O14715 1765 aaPredicted RBP18.74■□□□□ 0.59
DDX41-215ENST00000512431 EZH2Q15910 746 aaKnown RBP18.74■□□□□ 0.59
DDX41-215ENST00000512431 SPATA31A5Q5VU36 1347 aa18.74■□□□□ 0.59
DDX41-215ENST00000512431 SPATA31A7Q8IWB4 1347 aa18.74■□□□□ 0.59
DDX41-215ENST00000512431 ABCA3Q99758 1704 aa18.73■□□□□ 0.59
DDX41-215ENST00000512431 DISP2A7MBM2 1401 aa18.72■□□□□ 0.59
DDX41-215ENST00000512431 ANKARQ7Z5J8 1434 aa18.72■□□□□ 0.59
DDX41-215ENST00000512431 YY1P25490 414 aa18.71■□□□□ 0.59
DDX41-215ENST00000512431 CFAP70Q5T0N1 1121 aa18.71■□□□□ 0.59
DDX41-215ENST00000512431 FAM196AQ6ZSG2 479 aa18.71■□□□□ 0.59
DDX41-215ENST00000512431 MPHOSPH9Q99550 1183 aa18.71■□□□□ 0.59
DDX41-215ENST00000512431 COL14A1Q05707 1796 aaKnown RBP18.7■□□□□ 0.58
DDX41-215ENST00000512431 TRIM37O94972 964 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms