RNA–Protein interactions for RNA: ENST00000512394.5

SNX2-211, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-211ENST00000512394 TMEM132EQ6IEE7 984 aa25.02■■□□□ 1.6
SNX2-211ENST00000512394 DDX17Q92841 729 aaKnown RBP25.02■■□□□ 1.6
SNX2-211ENST00000512394 ORAI2Q96SN7 254 aa25■■□□□ 1.59
SNX2-211ENST00000512394 NUTM2BA6NNL0 878 aaPredicted RBP24.99■■□□□ 1.59
SNX2-211ENST00000512394 NUTM2EB1AL46 878 aaPredicted RBP24.99■■□□□ 1.59
SNX2-211ENST00000512394 NUTM2AQ8IVF1 878 aaPredicted RBP24.99■■□□□ 1.59
SNX2-211ENST00000512394 PNPLA6Q8IY17 1366 aa24.99■■□□□ 1.59
SNX2-211ENST00000512394 C14orf93Q9H972 538 aaKnown RBP24.99■■□□□ 1.59
SNX2-211ENST00000512394 WAPLQ7Z5K2 1190 aa24.98■■□□□ 1.59
SNX2-211ENST00000512394 ZNF772Q68DY9 489 aaPredicted RBP24.97■■□□□ 1.59
SNX2-211ENST00000512394 FMN2Q9NZ56 1722 aa24.97■■□□□ 1.59
SNX2-211ENST00000512394 PLEKHH1Q9ULM0 1364 aa24.96■■□□□ 1.59
SNX2-211ENST00000512394 DHX57Q6P158 1386 aaKnown RBP24.95■■□□□ 1.59
SNX2-211ENST00000512394 SOS2Q07890 1332 aaPredicted RBP24.95■■□□□ 1.58
SNX2-211ENST00000512394 CFAP70Q5T0N1 1121 aa24.95■■□□□ 1.58
SNX2-211ENST00000512394 ESCO1Q5FWF5 840 aa24.93■■□□□ 1.58
SNX2-211ENST00000512394 SIRT1Q96EB6 747 aa24.93■■□□□ 1.58
SNX2-211ENST00000512394 KIF1AQ12756 1690 aa24.91■■□□□ 1.58
SNX2-211ENST00000512394 NPHP3Q7Z494 1330 aa24.91■■□□□ 1.58
SNX2-211ENST00000512394 COL22A1Q8NFW1 1626 aaPredicted RBP24.91■■□□□ 1.58
SNX2-211ENST00000512394 DLC1Q96QB1 1528 aa24.91■■□□□ 1.58
SNX2-211ENST00000512394 PXDNQ92626 1479 aa24.89■■□□□ 1.58
SNX2-211ENST00000512394 ADGRB1O14514 1584 aa24.89■■□□□ 1.58
SNX2-211ENST00000512394 AFF2P51816 1311 aa24.87■■□□□ 1.57
SNX2-211ENST00000512394 NUTM2FA1L443 756 aa24.87■■□□□ 1.57
SNX2-211ENST00000512394 DCAF11Q8TEB1 546 aa24.87■■□□□ 1.57
SNX2-211ENST00000512394 STAC3Q96MF2 364 aa24.86■■□□□ 1.57
SNX2-211ENST00000512394 C8orf37Q96NL8 207 aa24.86■■□□□ 1.57
SNX2-211ENST00000512394 PRAM1Q96QH2 718 aa24.85■■□□□ 1.57
SNX2-211ENST00000512394 TRIM26Q12899 539 aaPredicted RBP24.84■■□□□ 1.57
SNX2-211ENST00000512394 KDM2AQ9Y2K7 1162 aa24.84■■□□□ 1.57
SNX2-211ENST00000512394 RGPD8O14715 1765 aaPredicted RBP24.84■■□□□ 1.57
SNX2-211ENST00000512394 ADGRB2O60241 1585 aa24.84■■□□□ 1.57
SNX2-211ENST00000512394 FOXO3O43524 673 aa24.83■■□□□ 1.57
SNX2-211ENST00000512394 ADAMTS2O95450 1211 aa24.81■■□□□ 1.56
SNX2-211ENST00000512394 RXRBP28702 533 aa24.81■■□□□ 1.56
SNX2-211ENST00000512394 POGKQ9P215 609 aa24.81■■□□□ 1.56
SNX2-211ENST00000512394 XPCQ01831 940 aaPredicted RBP24.8■■□□□ 1.56
SNX2-211ENST00000512394 SAFB2Q14151 953 aaKnown RBP eCLIP24.8■■□□□ 1.56
SNX2-211ENST00000512394 CDK12Q9NYV4 1490 aaPredicted RBP24.8■■□□□ 1.56
SNX2-211ENST00000512394 MARF1Q9Y4F3 1742 aaKnown RBP24.79■■□□□ 1.56
SNX2-211ENST00000512394 NGLY1Q96IV0 654 aa24.78■■□□□ 1.56
SNX2-211ENST00000512394 TRAK1Q9UPV9 953 aa24.78■■□□□ 1.56
SNX2-211ENST00000512394 USP32Q8NFA0 1604 aa24.76■■□□□ 1.55
SNX2-211ENST00000512394 ANKARQ7Z5J8 1434 aa24.76■■□□□ 1.55
SNX2-211ENST00000512394 ARHGEF28Q8N1W1 1705 aaKnown RBP24.75■■□□□ 1.55
SNX2-211ENST00000512394 KIAA1210Q9ULL0 1709 aa24.75■■□□□ 1.55
SNX2-211ENST00000512394 PHF8Q9UPP1 1060 aa24.74■■□□□ 1.55
SNX2-211ENST00000512394 EIF3AQ14152 1382 aaKnown RBP24.73■■□□□ 1.55
SNX2-211ENST00000512394 QTRT2Q9H974 415 aaKnown RBP24.73■■□□□ 1.55
SNX2-211ENST00000512394 SPATA31A3Q5VYP0 1347 aa24.72■■□□□ 1.55
SNX2-211ENST00000512394 KRT28Q7Z3Y7 464 aa24.71■■□□□ 1.55
SNX2-211ENST00000512394 RBM6P78332 1123 aaKnown RBP24.7■■□□□ 1.54
SNX2-211ENST00000512394 USP21Q9UK80 565 aa24.7■■□□□ 1.54
SNX2-211ENST00000512394 TULP4Q9NRJ4 1543 aa24.7■■□□□ 1.54
SNX2-211ENST00000512394 TNS3Q68CZ2 1445 aa24.69■■□□□ 1.54
SNX2-211ENST00000512394 MINK1Q8N4C8 1332 aaPredicted RBP24.69■■□□□ 1.54
SNX2-211ENST00000512394 PSME1Q06323 249 aa24.69■■□□□ 1.54
SNX2-211ENST00000512394 FNBP4Q8N3X1 1017 aaPredicted RBP24.69■■□□□ 1.54
SNX2-211ENST00000512394 HIRIP3Q9BW71 556 aaPredicted RBP24.69■■□□□ 1.54
SNX2-211ENST00000512394 RGS12O14924 1447 aa24.69■■□□□ 1.54
SNX2-211ENST00000512394 SBNO1A3KN83 1393 aa24.67■■□□□ 1.54
SNX2-211ENST00000512394 TRPC5Q9UL62 973 aaPredicted RBP24.66■■□□□ 1.54
SNX2-211ENST00000512394 ITSN1Q15811 1721 aa24.66■■□□□ 1.54
SNX2-211ENST00000512394 ABCA3Q99758 1704 aa24.65■■□□□ 1.54
SNX2-211ENST00000512394 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.65■■□□□ 1.54
SNX2-211ENST00000512394 WASLO00401 505 aaPredicted RBP24.64■■□□□ 1.54
SNX2-211ENST00000512394 ATRNO75882 1429 aa24.63■■□□□ 1.53
SNX2-211ENST00000512394 PMFBP1Q8TBY8 1022 aa24.63■■□□□ 1.53
SNX2-211ENST00000512394 ARHGEF10O15013 1369 aa24.63■■□□□ 1.53
SNX2-211ENST00000512394 TRPM3Q9HCF6 1732 aaPredicted RBP24.63■■□□□ 1.53
SNX2-211ENST00000512394 BCL9LQ86UU0 1499 aa24.62■■□□□ 1.53
SNX2-211ENST00000512394 PRR36Q9H6K5 1346 aa24.61■■□□□ 1.53
SNX2-211ENST00000512394 HAP1P54257 671 aaPredicted RBP24.6■■□□□ 1.53
SNX2-211ENST00000512394 UPF1Q92900 1129 aaKnown RBP eCLIP24.6■■□□□ 1.53
SNX2-211ENST00000512394 GPRASP1Q5JY77 1395 aa24.59■■□□□ 1.53
SNX2-211ENST00000512394 ALS2Q96Q42 1657 aa24.59■■□□□ 1.53
SNX2-211ENST00000512394 ATP7BP35670 1465 aa24.58■■□□□ 1.53
SNX2-211ENST00000512394 LMOD2Q6P5Q4 547 aa24.58■■□□□ 1.53
SNX2-211ENST00000512394 SLIT2O94813 1529 aa24.57■■□□□ 1.52
SNX2-211ENST00000512394 PLCH1Q4KWH8 1693 aa24.56■■□□□ 1.52
SNX2-211ENST00000512394 TOPAZ1Q8N9V7 1692 aa24.55■■□□□ 1.52
SNX2-211ENST00000512394 NWD2Q9ULI1 1742 aa24.55■■□□□ 1.52
SNX2-211ENST00000512394 CABLES1Q8TDN4 633 aa24.54■■□□□ 1.52
SNX2-211ENST00000512394 NBPF1Q3BBV0 1214 aa24.53■■□□□ 1.52
SNX2-211ENST00000512394 NGDNQ8NEJ9 315 aaKnown RBP24.53■■□□□ 1.52
SNX2-211ENST00000512394 PLEKHG5O94827 1062 aa24.52■■□□□ 1.52
SNX2-211ENST00000512394 UNC5CLQ8IV45 518 aa24.52■■□□□ 1.52
SNX2-211ENST00000512394 QRICH2Q9H0J4 1663 aa24.51■■□□□ 1.51
SNX2-211ENST00000512394 NUDT16Q96DE0 195 aaKnown RBP24.51■■□□□ 1.51
SNX2-211ENST00000512394 GJD4Q96KN9 370 aaPredicted RBP24.51■■□□□ 1.51
SNX2-211ENST00000512394 ATAD2Q6PL18 1390 aa24.51■■□□□ 1.51
SNX2-211ENST00000512394 L3MBTL2Q969R5 705 aa24.5■■□□□ 1.51
SNX2-211ENST00000512394 CDK19Q9BWU1 502 aa24.5■■□□□ 1.51
SNX2-211ENST00000512394 TRPM1Q7Z4N2 1603 aa24.5■■□□□ 1.51
SNX2-211ENST00000512394 CRYBG1Q9Y4K1 1723 aa24.49■■□□□ 1.51
SNX2-211ENST00000512394 GLI3P10071 1580 aa24.49■■□□□ 1.51
SNX2-211ENST00000512394 RALGAPBQ86X10 1494 aa24.48■■□□□ 1.51
SNX2-211ENST00000512394 CENPJQ9HC77 1338 aaPredicted RBP24.47■■□□□ 1.51
SNX2-211ENST00000512394 SIN3AQ96ST3 1273 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms