RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 SMAPO00193 183 aa9.01□□□□□ -0.97
CHD1-208ENST00000512392 NEFLP07196 543 aa9.01□□□□□ -0.97
CHD1-208ENST00000512392 AMHR2Q16671 573 aa9.01□□□□□ -0.97
CHD1-208ENST00000512392 STAC3Q96MF2 364 aa9.01□□□□□ -0.97
CHD1-208ENST00000512392 RBM47A0AV96 593 aaKnown RBP9.01□□□□□ -0.97
CHD1-208ENST00000512392 CANXP27824 592 aaKnown RBP9.01□□□□□ -0.97
CHD1-208ENST00000512392 FAM98CQ17RN3 349 aaKnown RBP9.01□□□□□ -0.97
CHD1-208ENST00000512392 PHOX2BQ99453 314 aa9.01□□□□□ -0.97
CHD1-208ENST00000512392 RCCD1A6NED2 376 aa9□□□□□ -0.97
CHD1-208ENST00000512392 MRPL50Q8N5N7 158 aaKnown RBP9□□□□□ -0.97
CHD1-208ENST00000512392 PCMTD1Q96MG8 357 aaPredicted RBP9□□□□□ -0.97
CHD1-208ENST00000512392 SEPT9Q9UHD8 586 aaPredicted RBP9□□□□□ -0.97
CHD1-208ENST00000512392 COG6Q9Y2V7 657 aa9□□□□□ -0.97
CHD1-208ENST00000512392 ZNF330Q9Y3S2 320 aaPredicted RBP9□□□□□ -0.97
CHD1-208ENST00000512392 DNAJB2P25686 324 aa8.99□□□□□ -0.97
CHD1-208ENST00000512392 MRRFQ96E11 262 aaKnown RBP8.97□□□□□ -0.97
CHD1-208ENST00000512392 CLCN1P35523 988 aa8.97□□□□□ -0.97
CHD1-208ENST00000512392 ANKRD13AQ8IZ07 590 aa8.97□□□□□ -0.97
CHD1-208ENST00000512392 TMEM134Q9H6X4 195 aa8.97□□□□□ -0.97
CHD1-208ENST00000512392 SIRT1Q96EB6 747 aa8.96□□□□□ -0.98
CHD1-208ENST00000512392 DRC1Q96MC2 740 aa8.96□□□□□ -0.98
CHD1-208ENST00000512392 TMUB1Q9BVT8 246 aa8.96□□□□□ -0.98
CHD1-208ENST00000512392 HDGFP51858 240 aaKnown RBP8.95□□□□□ -0.98
CHD1-208ENST00000512392 MDM2Q00987 491 aaPredicted RBP8.95□□□□□ -0.98
CHD1-208ENST00000512392 SKIV2LQ15477 1246 aaKnown RBP8.95□□□□□ -0.98
CHD1-208ENST00000512392 GOLGA8CPA6NN73 597 aa8.95□□□□□ -0.98
CHD1-208ENST00000512392 ZFRQ96KR1 1074 aaKnown RBP8.95□□□□□ -0.98
CHD1-208ENST00000512392 GPCPD1Q9NPB8 672 aa8.95□□□□□ -0.98
CHD1-208ENST00000512392 TTLL12Q14166 644 aaPredicted RBP8.94□□□□□ -0.98
CHD1-208ENST00000512392 TXNDC2Q86VQ3 553 aa8.94□□□□□ -0.98
CHD1-208ENST00000512392 NLRP7Q8WX94 980 aa8.94□□□□□ -0.98
CHD1-208ENST00000512392 MS4A1P11836 297 aa8.92□□□□□ -0.98
CHD1-208ENST00000512392 SWT1Q5T5J6 900 aaKnown RBP8.92□□□□□ -0.98
CHD1-208ENST00000512392 LOC102724159A0A0B4J2E5 919 aa8.92□□□□□ -0.98
CHD1-208ENST00000512392 PWP2Q15269 919 aaKnown RBP8.92□□□□□ -0.98
CHD1-208ENST00000512392 NOL8Q76FK4 1167 aaKnown RBP8.92□□□□□ -0.98
CHD1-208ENST00000512392 SAMD7Q7Z3H4 446 aa8.92□□□□□ -0.98
CHD1-208ENST00000512392 REPIN1Q9BWE0 567 aaKnown RBP8.92□□□□□ -0.98
CHD1-208ENST00000512392 ANKRD62A6NC57 917 aa8.91□□□□□ -0.98
CHD1-208ENST00000512392 GIGYF2Q6Y7W6 1299 aaKnown RBP8.91□□□□□ -0.98
CHD1-208ENST00000512392 ANKK1Q8NFD2 765 aa8.91□□□□□ -0.98
CHD1-208ENST00000512392 ZC3H4Q9UPT8 1303 aaKnown RBP8.91□□□□□ -0.98
CHD1-208ENST00000512392 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.9□□□□□ -0.98
CHD1-208ENST00000512392 SLC4A3P48751 1232 aa8.9□□□□□ -0.98
CHD1-208ENST00000512392 CCDC136Q96JN2 1154 aa8.9□□□□□ -0.98
CHD1-208ENST00000512392 A0A0U1RQG5 324 aaPredicted RBP8.9□□□□□ -0.99
CHD1-208ENST00000512392 MARCH6O60337 910 aa8.9□□□□□ -0.99
CHD1-208ENST00000512392 ZNF662Q6ZS27 426 aa8.9□□□□□ -0.99
CHD1-208ENST00000512392 SULF1Q8IWU6 871 aa8.9□□□□□ -0.99
CHD1-208ENST00000512392 SLF2Q8IX21 1173 aa8.9□□□□□ -0.99
CHD1-208ENST00000512392 SREK1Q8WXA9 508 aaKnown RBP8.9□□□□□ -0.99
CHD1-208ENST00000512392 FAM217BQ9NTX9 383 aaPredicted RBP8.9□□□□□ -0.99
CHD1-208ENST00000512392 WNT2BQ93097 391 aa8.89□□□□□ -0.99
CHD1-208ENST00000512392 LRCH3Q96II8 777 aa8.89□□□□□ -0.99
CHD1-208ENST00000512392 CALR3Q96L12 384 aaKnown RBP8.89□□□□□ -0.99
CHD1-208ENST00000512392 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.89□□□□□ -0.99
CHD1-208ENST00000512392 PPP1R1BQ9UD71 204 aaPredicted RBP8.89□□□□□ -0.99
CHD1-208ENST00000512392 NCLP19338 710 aaKnown RBP8.88□□□□□ -0.99
CHD1-208ENST00000512392 SSTR3P32745 418 aaPredicted RBP8.88□□□□□ -0.99
CHD1-208ENST00000512392 USTQ9Y2C2 406 aa8.88□□□□□ -0.99
CHD1-208ENST00000512392 SOWAHBA6NEL2 793 aa8.88□□□□□ -0.99
CHD1-208ENST00000512392 SNRKQ9NRH2 765 aa8.88□□□□□ -0.99
CHD1-208ENST00000512392 GIMAP6Q6P9H5 292 aa8.87□□□□□ -0.99
CHD1-208ENST00000512392 SPNS2Q8IVW8 549 aa8.87□□□□□ -0.99
CHD1-208ENST00000512392 PROCA1Q8NCQ7 364 aaPredicted RBP8.87□□□□□ -0.99
CHD1-208ENST00000512392 PBXIP1Q96AQ6 731 aa8.87□□□□□ -0.99
CHD1-208ENST00000512392 HIRIP3Q9BW71 556 aaPredicted RBP8.87□□□□□ -0.99
CHD1-208ENST00000512392 RIPOR2Q9Y4F9 1068 aa8.87□□□□□ -0.99
CHD1-208ENST00000512392 POM121CA8CG34 1229 aa8.86□□□□□ -0.99
CHD1-208ENST00000512392 TCF3P15923 654 aa8.86□□□□□ -0.99
CHD1-208ENST00000512392 RFX1P22670 979 aa8.86□□□□□ -0.99
CHD1-208ENST00000512392 DDX11L8A8MPP1 907 aa8.86□□□□□ -0.99
CHD1-208ENST00000512392 SRPK2P78362 688 aaKnown RBP8.85□□□□□ -0.99
CHD1-208ENST00000512392 SH3D19Q5HYK7 790 aa8.85□□□□□ -0.99
CHD1-208ENST00000512392 GLMNQ92990 594 aa8.85□□□□□ -0.99
CHD1-208ENST00000512392 CD46P15529 392 aa8.84□□□□□ -0.99
CHD1-208ENST00000512392 KCTD12Q96CX2 325 aaKnown RBP8.84□□□□□ -0.99
CHD1-208ENST00000512392 ZNF16P17020 682 aaPredicted RBP8.84□□□□□ -0.99
CHD1-208ENST00000512392 THSD4Q6ZMP0 1018 aa8.84□□□□□ -0.99
CHD1-208ENST00000512392 SPDYE5A6NIY4 337 aa8.83□□□□□ -1
CHD1-208ENST00000512392 SLC10A3P09131 477 aa8.83□□□□□ -1
CHD1-208ENST00000512392 CSB-PGBD3P0DP91 1061 aa8.83□□□□□ -1
CHD1-208ENST00000512392 BCAMP50895 628 aa8.83□□□□□ -1
CHD1-208ENST00000512392 RDH13Q8NBN7 331 aa8.83□□□□□ -1
CHD1-208ENST00000512392 TSR3Q9UJK0 312 aaKnown RBP8.83□□□□□ -1
CHD1-208ENST00000512392 RNF40O75150 1001 aa8.82□□□□□ -1
CHD1-208ENST00000512392 NOM1Q5C9Z4 860 aaKnown RBP8.82□□□□□ -1
CHD1-208ENST00000512392 PPP4CP60510 307 aa8.82□□□□□ -1
CHD1-208ENST00000512392 C8orf37Q96NL8 207 aa8.82□□□□□ -1
CHD1-208ENST00000512392 GDPD2Q9HCC8 539 aa8.82□□□□□ -1
CHD1-208ENST00000512392 HPS5Q9UPZ3 1129 aa8.82□□□□□ -1
CHD1-208ENST00000512392 PLEKHD1A6NEE1 506 aa8.81□□□□□ -1
CHD1-208ENST00000512392 BEGAINQ9BUH8 593 aa8.81□□□□□ -1
CHD1-208ENST00000512392 SLC52A1Q9NWF4 448 aa8.81□□□□□ -1
CHD1-208ENST00000512392 FGD1P98174 961 aa8.81□□□□□ -1
CHD1-208ENST00000512392 DNAJC14Q6Y2X3 702 aaPredicted RBP8.81□□□□□ -1
CHD1-208ENST00000512392 VRTNQ9H8Y1 702 aa8.81□□□□□ -1
CHD1-208ENST00000512392 PPME1Q9Y570 386 aa8.81□□□□□ -1
CHD1-208ENST00000512392 GCGRP47871 477 aa8.8□□□□□ -1
CHD1-208ENST00000512392 TEX2Q8IWB9 1127 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms