RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 STRCQ7RTU9 1775 aa13.88□□□□□ -0.19
PDGFRA-209ENST00000512143 CDCA8Q53HL2 280 aa13.88□□□□□ -0.19
PDGFRA-209ENST00000512143 POGKQ9P215 609 aa13.88□□□□□ -0.19
PDGFRA-209ENST00000512143 TULP4Q9NRJ4 1543 aa13.88□□□□□ -0.19
PDGFRA-209ENST00000512143 KCNA6P17658 529 aa13.85□□□□□ -0.19
PDGFRA-209ENST00000512143 EVC2Q86UK5 1308 aa13.85□□□□□ -0.19
PDGFRA-209ENST00000512143 NWD1Q149M9 1564 aa13.84□□□□□ -0.19
PDGFRA-209ENST00000512143 SAFB2Q14151 953 aaKnown RBP eCLIP13.84□□□□□ -0.19
PDGFRA-209ENST00000512143 MINK1Q8N4C8 1332 aaPredicted RBP13.84□□□□□ -0.19
PDGFRA-209ENST00000512143 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.84□□□□□ -0.19
PDGFRA-209ENST00000512143 ADGRB2O60241 1585 aa13.82□□□□□ -0.2
PDGFRA-209ENST00000512143 MYOM1P52179 1685 aa13.82□□□□□ -0.2
PDGFRA-209ENST00000512143 POLR3GLQ9BT43 218 aa13.81□□□□□ -0.2
PDGFRA-209ENST00000512143 CDK19Q9BWU1 502 aa13.81□□□□□ -0.2
PDGFRA-209ENST00000512143 WASLO00401 505 aaPredicted RBP13.8□□□□□ -0.2
PDGFRA-209ENST00000512143 PER1O15534 1290 aaPredicted RBP13.8□□□□□ -0.2
PDGFRA-209ENST00000512143 CABP2Q9NPB3 220 aa13.8□□□□□ -0.2
PDGFRA-209ENST00000512143 PANK3Q9H999 370 aa13.78□□□□□ -0.2
PDGFRA-209ENST00000512143 ATAD2Q6PL18 1390 aa13.78□□□□□ -0.2
PDGFRA-209ENST00000512143 NKTRP30414 1462 aaKnown RBP13.78□□□□□ -0.2
PDGFRA-209ENST00000512143 STRCP1A6NGW2 1772 aa13.78□□□□□ -0.2
PDGFRA-209ENST00000512143 MIER1Q8N108 512 aa13.77□□□□□ -0.21
PDGFRA-209ENST00000512143 NINLQ9Y2I6 1382 aa13.77□□□□□ -0.21
PDGFRA-209ENST00000512143 SRPK2P78362 688 aaKnown RBP13.76□□□□□ -0.21
PDGFRA-209ENST00000512143 SLC12A5Q9H2X9 1139 aa13.76□□□□□ -0.21
PDGFRA-209ENST00000512143 DMRT2Q9Y5R5 561 aa13.75□□□□□ -0.21
PDGFRA-209ENST00000512143 NCOA3Q9Y6Q9 1424 aa13.74□□□□□ -0.21
PDGFRA-209ENST00000512143 PRR36Q9H6K5 1346 aa13.74□□□□□ -0.21
PDGFRA-209ENST00000512143 CARD14Q9BXL6 1004 aa13.74□□□□□ -0.21
PDGFRA-209ENST00000512143 ATP7BP35670 1465 aa13.74□□□□□ -0.21
PDGFRA-209ENST00000512143 CD163L1Q9NR16 1453 aa13.74□□□□□ -0.21
PDGFRA-209ENST00000512143 ADGRL3Q9HAR2 1447 aa13.73□□□□□ -0.21
PDGFRA-209ENST00000512143 NALCNQ8IZF0 1738 aa13.73□□□□□ -0.21
PDGFRA-209ENST00000512143 NUDT16Q96DE0 195 aaKnown RBP13.73□□□□□ -0.21
PDGFRA-209ENST00000512143 ANKRD36BQ8N2N9 1353 aa13.72□□□□□ -0.21
PDGFRA-209ENST00000512143 CDC42BPGQ6DT37 1551 aa13.72□□□□□ -0.21
PDGFRA-209ENST00000512143 PROSER2Q86WR7 435 aaPredicted RBP13.72□□□□□ -0.21
PDGFRA-209ENST00000512143 CCDC61Q9Y6R9 512 aa13.72□□□□□ -0.21
PDGFRA-209ENST00000512143 USP32Q8NFA0 1604 aa13.72□□□□□ -0.21
PDGFRA-209ENST00000512143 ANP32CO43423 234 aa13.71□□□□□ -0.21
PDGFRA-209ENST00000512143 AMER1Q5JTC6 1135 aaPredicted RBP13.71□□□□□ -0.21
PDGFRA-209ENST00000512143 TMC1Q8TDI8 760 aa13.71□□□□□ -0.21
PDGFRA-209ENST00000512143 RBM33Q96EV2 1170 aaKnown RBP13.71□□□□□ -0.21
PDGFRA-209ENST00000512143 CABP1Q9NZU7 370 aa13.71□□□□□ -0.21
PDGFRA-209ENST00000512143 NPC1L1Q9UHC9 1359 aa13.71□□□□□ -0.22
PDGFRA-209ENST00000512143 FMN2Q9NZ56 1722 aa13.7□□□□□ -0.22
PDGFRA-209ENST00000512143 TOPAZ1Q8N9V7 1692 aa13.7□□□□□ -0.22
PDGFRA-209ENST00000512143 PLEKHG3A1L390 1219 aa13.7□□□□□ -0.22
PDGFRA-209ENST00000512143 PRKRIP1Q9H875 184 aaPredicted RBP13.7□□□□□ -0.22
PDGFRA-209ENST00000512143 ANKARQ7Z5J8 1434 aa13.7□□□□□ -0.22
PDGFRA-209ENST00000512143 ZNF335Q9H4Z2 1342 aaPredicted RBP13.69□□□□□ -0.22
PDGFRA-209ENST00000512143 CPSF1Q10570 1443 aaKnown RBP13.69□□□□□ -0.22
PDGFRA-209ENST00000512143 PPIP5K1Q6PFW1 1433 aa13.69□□□□□ -0.22
PDGFRA-209ENST00000512143 A0A1W2PP64 1363 aa13.69□□□□□ -0.22
PDGFRA-209ENST00000512143 TMEM94Q12767 1356 aa13.69□□□□□ -0.22
PDGFRA-209ENST00000512143 C19orf44Q9H6X5 657 aa13.68□□□□□ -0.22
PDGFRA-209ENST00000512143 LRRC7Q96NW7 1537 aa13.68□□□□□ -0.22
PDGFRA-209ENST00000512143 XIRP1Q702N8 1843 aaKnown RBP13.67□□□□□ -0.22
PDGFRA-209ENST00000512143 TERF2IPQ9NYB0 399 aa13.67□□□□□ -0.22
PDGFRA-209ENST00000512143 KNSTRNQ9Y448 316 aa13.67□□□□□ -0.22
PDGFRA-209ENST00000512143 KTN1Q86UP2 1357 aaKnown RBP13.67□□□□□ -0.22
PDGFRA-209ENST00000512143 DCCP43146 1447 aa13.66□□□□□ -0.22
PDGFRA-209ENST00000512143 NSD3Q9BZ95 1437 aa13.66□□□□□ -0.22
PDGFRA-209ENST00000512143 RGPD8O14715 1765 aaPredicted RBP13.66□□□□□ -0.22
PDGFRA-209ENST00000512143 PARD3Q8TEW0 1356 aa13.66□□□□□ -0.22
PDGFRA-209ENST00000512143 CCER2I3L3R5 266 aa13.65□□□□□ -0.22
PDGFRA-209ENST00000512143 RALBP1Q15311 655 aa13.65□□□□□ -0.22
PDGFRA-209ENST00000512143 POLR3AO14802 1390 aaPredicted RBP13.65□□□□□ -0.22
PDGFRA-209ENST00000512143 AKAP12Q02952 1782 aa13.65□□□□□ -0.22
PDGFRA-209ENST00000512143 ITSN1Q15811 1721 aa13.64□□□□□ -0.23
PDGFRA-209ENST00000512143 HDGFL2Q7Z4V5 671 aaPredicted RBP13.64□□□□□ -0.23
PDGFRA-209ENST00000512143 ZNF692Q9BU19 519 aaPredicted RBP13.64□□□□□ -0.23
PDGFRA-209ENST00000512143 NUTM2FA1L443 756 aa13.63□□□□□ -0.23
PDGFRA-209ENST00000512143 C14orf37Q86TY3 774 aa13.63□□□□□ -0.23
PDGFRA-209ENST00000512143 MON2Q7Z3U7 1717 aa13.63□□□□□ -0.23
PDGFRA-209ENST00000512143 SSH2Q76I76 1423 aa13.63□□□□□ -0.23
PDGFRA-209ENST00000512143 ACEP12821 1306 aa13.63□□□□□ -0.23
PDGFRA-209ENST00000512143 LTBP4Q8N2S1 1624 aa13.62□□□□□ -0.23
PDGFRA-209ENST00000512143 CC2D1BQ5T0F9 858 aaKnown RBP13.62□□□□□ -0.23
PDGFRA-209ENST00000512143 EDC4Q6P2E9 1401 aaKnown RBP13.62□□□□□ -0.23
PDGFRA-209ENST00000512143 CGNL1Q0VF96 1302 aa13.62□□□□□ -0.23
PDGFRA-209ENST00000512143 NSD2O96028 1365 aa13.61□□□□□ -0.23
PDGFRA-209ENST00000512143 MST1RQ04912 1400 aa13.61□□□□□ -0.23
PDGFRA-209ENST00000512143 C1orf167Q5SNV9 1468 aa13.61□□□□□ -0.23
PDGFRA-209ENST00000512143 MSH6P52701 1360 aa13.6□□□□□ -0.23
PDGFRA-209ENST00000512143 FYB1O15117 783 aa13.6□□□□□ -0.23
PDGFRA-209ENST00000512143 USP6P35125 1406 aa13.6□□□□□ -0.23
PDGFRA-209ENST00000512143 CADPS2Q86UW7 1296 aa13.6□□□□□ -0.23
PDGFRA-209ENST00000512143 NRKQ7Z2Y5 1582 aa13.59□□□□□ -0.23
PDGFRA-209ENST00000512143 ATF3P18847 181 aa13.59□□□□□ -0.23
PDGFRA-209ENST00000512143 PMFBP1Q8TBY8 1022 aa13.59□□□□□ -0.23
PDGFRA-209ENST00000512143 PHF8Q9UPP1 1060 aa13.59□□□□□ -0.23
PDGFRA-209ENST00000512143 MYBBP1AQ9BQG0 1328 aaKnown RBP13.59□□□□□ -0.23
PDGFRA-209ENST00000512143 CCDC184Q52MB2 194 aa13.58□□□□□ -0.24
PDGFRA-209ENST00000512143 ORAI2Q96SN7 254 aa13.57□□□□□ -0.24
PDGFRA-209ENST00000512143 TTC21BQ7Z4L5 1316 aa13.57□□□□□ -0.24
PDGFRA-209ENST00000512143 BRD4O60885 1362 aaPredicted RBP13.57□□□□□ -0.24
PDGFRA-209ENST00000512143 PPP2R1AP30153 589 aa13.56□□□□□ -0.24
PDGFRA-209ENST00000512143 CNGB1Q14028 1251 aaPredicted RBP13.56□□□□□ -0.24
PDGFRA-209ENST00000512143 ESCO1Q5FWF5 840 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms