RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 SPATA31A6Q5VVP1 1343 aa14.92□□□□□ -0.02
HOXA4-203ENST00000511914 NUTM2BA6NNL0 878 aaPredicted RBP14.91□□□□□ -0.02
HOXA4-203ENST00000511914 NUTM2EB1AL46 878 aaPredicted RBP14.91□□□□□ -0.02
HOXA4-203ENST00000511914 NUTM2AQ8IVF1 878 aaPredicted RBP14.91□□□□□ -0.02
HOXA4-203ENST00000511914 XRN1Q8IZH2 1706 aaKnown RBP14.91□□□□□ -0.02
HOXA4-203ENST00000511914 PIK3R4Q99570 1358 aa14.9□□□□□ -0.02
HOXA4-203ENST00000511914 BRINP3Q76B58 766 aa14.89□□□□□ -0.03
HOXA4-203ENST00000511914 FOXD4L1Q9NU39 408 aa14.89□□□□□ -0.03
HOXA4-203ENST00000511914 NHSL1Q5SYE7 1610 aa14.88□□□□□ -0.03
HOXA4-203ENST00000511914 ASXL1Q8IXJ9 1541 aa14.88□□□□□ -0.03
HOXA4-203ENST00000511914 ZNF326Q5BKZ1 582 aaKnown RBP14.88□□□□□ -0.03
HOXA4-203ENST00000511914 ZNF772Q68DY9 489 aaPredicted RBP14.88□□□□□ -0.03
HOXA4-203ENST00000511914 AKT1S1Q96B36 256 aa14.88□□□□□ -0.03
HOXA4-203ENST00000511914 NALCNQ8IZF0 1738 aa14.88□□□□□ -0.03
HOXA4-203ENST00000511914 ZNF316A6NFI3 1004 aaPredicted RBP14.87□□□□□ -0.03
HOXA4-203ENST00000511914 SETBP1Q9Y6X0 1596 aa14.86□□□□□ -0.03
HOXA4-203ENST00000511914 KIF1BO60333 1816 aa14.85□□□□□ -0.03
HOXA4-203ENST00000511914 CLTCL1P53675 1640 aa14.85□□□□□ -0.03
HOXA4-203ENST00000511914 UPF1Q92900 1129 aaKnown RBP eCLIP14.85□□□□□ -0.03
HOXA4-203ENST00000511914 MST1RQ04912 1400 aa14.84□□□□□ -0.03
HOXA4-203ENST00000511914 DDX17Q92841 729 aaKnown RBP14.84□□□□□ -0.03
HOXA4-203ENST00000511914 L3MBTL2Q969R5 705 aa14.84□□□□□ -0.03
HOXA4-203ENST00000511914 ZBTB12Q9Y330 459 aaPredicted RBP14.84□□□□□ -0.03
HOXA4-203ENST00000511914 METP08581 1390 aa14.84□□□□□ -0.03
HOXA4-203ENST00000511914 DCCP43146 1447 aa14.83□□□□□ -0.03
HOXA4-203ENST00000511914 RXRBP28702 533 aa14.83□□□□□ -0.04
HOXA4-203ENST00000511914 AFF2P51816 1311 aa14.83□□□□□ -0.04
HOXA4-203ENST00000511914 CCDC144AA2RUR9 1427 aa14.83□□□□□ -0.04
HOXA4-203ENST00000511914 NEXMIFQ5QGS0 1516 aa14.82□□□□□ -0.04
HOXA4-203ENST00000511914 STAC3Q96MF2 364 aa14.8□□□□□ -0.04
HOXA4-203ENST00000511914 C8orf37Q96NL8 207 aa14.8□□□□□ -0.04
HOXA4-203ENST00000511914 ADGRL3Q9HAR2 1447 aa14.79□□□□□ -0.04
HOXA4-203ENST00000511914 LRRC59Q96AG4 307 aaKnown RBP14.78□□□□□ -0.04
HOXA4-203ENST00000511914 PNPLA6Q8IY17 1366 aa14.77□□□□□ -0.04
HOXA4-203ENST00000511914 REM2Q8IYK8 340 aaPredicted RBP14.77□□□□□ -0.05
HOXA4-203ENST00000511914 CDK12Q9NYV4 1490 aaPredicted RBP14.76□□□□□ -0.05
HOXA4-203ENST00000511914 RGS12O14924 1447 aa14.75□□□□□ -0.05
HOXA4-203ENST00000511914 ADAMTS2O95450 1211 aa14.75□□□□□ -0.05
HOXA4-203ENST00000511914 QTRT2Q9H974 415 aaKnown RBP14.75□□□□□ -0.05
HOXA4-203ENST00000511914 SP7Q8TDD2 431 aaPredicted RBP14.74□□□□□ -0.05
HOXA4-203ENST00000511914 C1orf167Q5SNV9 1468 aa14.74□□□□□ -0.05
HOXA4-203ENST00000511914 PPLO60437 1756 aa14.73□□□□□ -0.05
HOXA4-203ENST00000511914 NGLY1Q96IV0 654 aa14.72□□□□□ -0.05
HOXA4-203ENST00000511914 ORAI2Q96SN7 254 aa14.72□□□□□ -0.05
HOXA4-203ENST00000511914 LAMC1P11047 1609 aa14.72□□□□□ -0.05
HOXA4-203ENST00000511914 SPATA31E1Q6ZUB1 1445 aa14.72□□□□□ -0.05
HOXA4-203ENST00000511914 RBM6P78332 1123 aaKnown RBP14.71□□□□□ -0.05
HOXA4-203ENST00000511914 ROBO2Q9HCK4 1378 aa14.71□□□□□ -0.06
HOXA4-203ENST00000511914 PTCH1Q13635 1447 aa14.7□□□□□ -0.06
HOXA4-203ENST00000511914 PIP4P2Q8N4L2 257 aa14.7□□□□□ -0.06
HOXA4-203ENST00000511914 NBPF8Q3BBV2 869 aa14.69□□□□□ -0.06
HOXA4-203ENST00000511914 MARF1Q9Y4F3 1742 aaKnown RBP14.69□□□□□ -0.06
HOXA4-203ENST00000511914 DCAF11Q8TEB1 546 aa14.68□□□□□ -0.06
HOXA4-203ENST00000511914 COL22A1Q8NFW1 1626 aaPredicted RBP14.67□□□□□ -0.06
HOXA4-203ENST00000511914 VGFO15240 615 aaPredicted RBP14.67□□□□□ -0.06
HOXA4-203ENST00000511914 EIF4G2P78344 907 aaKnown RBP eCLIP14.67□□□□□ -0.06
HOXA4-203ENST00000511914 USP21Q9UK80 565 aa14.67□□□□□ -0.06
HOXA4-203ENST00000511914 SOS2Q07890 1332 aaPredicted RBP14.66□□□□□ -0.06
HOXA4-203ENST00000511914 DIEXFQ68CQ4 756 aaKnown RBP14.66□□□□□ -0.06
HOXA4-203ENST00000511914 RALGAPBQ86X10 1494 aa14.65□□□□□ -0.06
HOXA4-203ENST00000511914 PRAG1Q86YV5 1406 aa14.65□□□□□ -0.06
HOXA4-203ENST00000511914 XPCQ01831 940 aaPredicted RBP14.64□□□□□ -0.07
HOXA4-203ENST00000511914 RGL3Q3MIN7 710 aa14.64□□□□□ -0.07
HOXA4-203ENST00000511914 RPGRIP1LQ68CZ1 1315 aa14.64□□□□□ -0.07
HOXA4-203ENST00000511914 ATAD2Q6PL18 1390 aa14.63□□□□□ -0.07
HOXA4-203ENST00000511914 NUTM2FA1L443 756 aa14.63□□□□□ -0.07
HOXA4-203ENST00000511914 ESCO1Q5FWF5 840 aa14.63□□□□□ -0.07
HOXA4-203ENST00000511914 CDC42BPGQ6DT37 1551 aa14.63□□□□□ -0.07
HOXA4-203ENST00000511914 IFT172Q9UG01 1749 aa14.62□□□□□ -0.07
HOXA4-203ENST00000511914 TRPC5Q9UL62 973 aaPredicted RBP14.62□□□□□ -0.07
HOXA4-203ENST00000511914 KDM2AQ9Y2K7 1162 aa14.62□□□□□ -0.07
HOXA4-203ENST00000511914 PITPNM1O00562 1244 aa14.61□□□□□ -0.07
HOXA4-203ENST00000511914 PXDNQ92626 1479 aa14.61□□□□□ -0.07
HOXA4-203ENST00000511914 EP400Q96L91 3159 aa14.61□□□□□ -0.07
HOXA4-203ENST00000511914 GPRASP1Q5JY77 1395 aa14.6□□□□□ -0.07
HOXA4-203ENST00000511914 RGPD8O14715 1765 aaPredicted RBP14.6□□□□□ -0.07
HOXA4-203ENST00000511914 ATRNO75882 1429 aa14.6□□□□□ -0.07
HOXA4-203ENST00000511914 ZBTB22O15209 634 aa14.6□□□□□ -0.07
HOXA4-203ENST00000511914 HSPA5P11021 654 aaKnown RBP14.6□□□□□ -0.07
HOXA4-203ENST00000511914 STK26Q9P289 416 aa14.6□□□□□ -0.07
HOXA4-203ENST00000511914 MYOM2P54296 1465 aa14.59□□□□□ -0.07
HOXA4-203ENST00000511914 FOXO3O43524 673 aa14.59□□□□□ -0.07
HOXA4-203ENST00000511914 FNBP4Q8N3X1 1017 aaPredicted RBP14.59□□□□□ -0.07
HOXA4-203ENST00000511914 NPHP3Q7Z494 1330 aa14.59□□□□□ -0.07
HOXA4-203ENST00000511914 KNDC1Q76NI1 1749 aa14.58□□□□□ -0.07
HOXA4-203ENST00000511914 WAPLQ7Z5K2 1190 aa14.58□□□□□ -0.08
HOXA4-203ENST00000511914 ADGRF5Q8IZF2 1346 aa14.58□□□□□ -0.08
HOXA4-203ENST00000511914 FMN2Q9NZ56 1722 aa14.58□□□□□ -0.08
HOXA4-203ENST00000511914 BCL9LQ86UU0 1499 aa14.57□□□□□ -0.08
HOXA4-203ENST00000511914 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.57□□□□□ -0.08
HOXA4-203ENST00000511914 BRWD3Q6RI45 1802 aa14.57□□□□□ -0.08
HOXA4-203ENST00000511914 CARD11Q9BXL7 1154 aa14.56□□□□□ -0.08
HOXA4-203ENST00000511914 ROCK2O75116 1388 aaKnown RBP14.56□□□□□ -0.08
HOXA4-203ENST00000511914 PLEKHH1Q9ULM0 1364 aa14.56□□□□□ -0.08
HOXA4-203ENST00000511914 SRCAPQ6ZRS2 3230 aa14.56□□□□□ -0.08
HOXA4-203ENST00000511914 PLEKHG5O94827 1062 aa14.55□□□□□ -0.08
HOXA4-203ENST00000511914 FXR2P51116 673 aaKnown RBP eCLIP14.55□□□□□ -0.08
HOXA4-203ENST00000511914 TMEM132EQ6IEE7 984 aa14.55□□□□□ -0.08
HOXA4-203ENST00000511914 USP47Q96K76 1375 aa14.55□□□□□ -0.08
HOXA4-203ENST00000511914 NRXN1Q9ULB1 1477 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms