RNA–Protein interactions for RNA: ENST00000511778.5

DROSHA-213, Transcript of drosha ribonuclease III, humanhuman

TSL 3

Gene DROSHA, Length 1,261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHA-213ENST00000511778 TRIM47Q96LD4 638 aa10.31□□□□□ -0.76
DROSHA-213ENST00000511778 SULF1Q8IWU6 871 aa10.3□□□□□ -0.76
DROSHA-213ENST00000511778 GNPATO15228 680 aa10.29□□□□□ -0.76
DROSHA-213ENST00000511778 FECHP22830 423 aa10.29□□□□□ -0.76
DROSHA-213ENST00000511778 TRIM32Q13049 653 aa10.29□□□□□ -0.76
DROSHA-213ENST00000511778 LCE2CQ5TA81 110 aa10.29□□□□□ -0.76
DROSHA-213ENST00000511778 RNF19BQ6ZMZ0 732 aa10.29□□□□□ -0.76
DROSHA-213ENST00000511778 P3H3Q8IVL6 736 aa10.29□□□□□ -0.76
DROSHA-213ENST00000511778 J3QL48 77 aa10.28□□□□□ -0.76
DROSHA-213ENST00000511778 GRIPAP1Q4V328 841 aa10.28□□□□□ -0.76
DROSHA-213ENST00000511778 AMER1Q5JTC6 1135 aaPredicted RBP10.28□□□□□ -0.76
DROSHA-213ENST00000511778 MRGPRX2Q96LB1 330 aa10.28□□□□□ -0.76
DROSHA-213ENST00000511778 KIFC2Q96AC6 838 aa10.27□□□□□ -0.77
DROSHA-213ENST00000511778 NLRP7Q8WX94 980 aa10.26□□□□□ -0.77
DROSHA-213ENST00000511778 REPIN1Q9BWE0 567 aaKnown RBP10.25□□□□□ -0.77
DROSHA-213ENST00000511778 MMP16P51512 607 aa10.24□□□□□ -0.77
DROSHA-213ENST00000511778 Q3C1V9 767 aa10.24□□□□□ -0.77
DROSHA-213ENST00000511778 RBM26Q5T8P6 1007 aaKnown RBP10.24□□□□□ -0.77
DROSHA-213ENST00000511778 HPS1Q92902 700 aa10.24□□□□□ -0.77
DROSHA-213ENST00000511778 SMYD5Q6GMV2 418 aa10.22□□□□□ -0.77
DROSHA-213ENST00000511778 FAM181BA6NEQ2 426 aa10.21□□□□□ -0.77
DROSHA-213ENST00000511778 SLC16A10Q8TF71 515 aa10.21□□□□□ -0.77
DROSHA-213ENST00000511778 GPR37O15354 613 aa10.19□□□□□ -0.78
DROSHA-213ENST00000511778 RC3H1Q5TC82 1133 aaKnown RBP10.19□□□□□ -0.78
DROSHA-213ENST00000511778 PHOX2BQ99453 314 aa10.19□□□□□ -0.78
DROSHA-213ENST00000511778 TESPA1A2RU30 521 aaPredicted RBP10.18□□□□□ -0.78
DROSHA-213ENST00000511778 DXOO77932 396 aaKnown RBP10.18□□□□□ -0.78
DROSHA-213ENST00000511778 USB1Q9BQ65 265 aaKnown RBP10.18□□□□□ -0.78
DROSHA-213ENST00000511778 RTN4Q9NQC3 1192 aaKnown RBP10.17□□□□□ -0.78
DROSHA-213ENST00000511778 WNT7BP56706 349 aa10.16□□□□□ -0.78
DROSHA-213ENST00000511778 CCDC24Q8N4L8 307 aa10.16□□□□□ -0.78
DROSHA-213ENST00000511778 NXF1Q9UBU9 619 aaKnown RBP10.16□□□□□ -0.78
DROSHA-213ENST00000511778 SKOR1P84550 965 aa10.15□□□□□ -0.78
DROSHA-213ENST00000511778 ALDH1A1P00352 501 aa10.13□□□□□ -0.79
DROSHA-213ENST00000511778 KDM4AO75164 1064 aa10.12□□□□□ -0.79
DROSHA-213ENST00000511778 CD46P15529 392 aa10.12□□□□□ -0.79
DROSHA-213ENST00000511778 GMPRP36959 345 aa10.12□□□□□ -0.79
DROSHA-213ENST00000511778 NPAS3Q8IXF0 933 aa10.12□□□□□ -0.79
DROSHA-213ENST00000511778 ZSCAN1Q8NBB4 408 aa10.12□□□□□ -0.79
DROSHA-213ENST00000511778 IRF7Q92985 503 aa10.12□□□□□ -0.79
DROSHA-213ENST00000511778 LORP23490 312 aaPredicted RBP10.09□□□□□ -0.79
DROSHA-213ENST00000511778 USP46P62068 366 aa10.08□□□□□ -0.8
DROSHA-213ENST00000511778 CAPN5O15484 640 aaPredicted RBP10.07□□□□□ -0.8
DROSHA-213ENST00000511778 SIAH2O43255 324 aa10.07□□□□□ -0.8
DROSHA-213ENST00000511778 TRIM46Q7Z4K8 759 aa10.07□□□□□ -0.8
DROSHA-213ENST00000511778 WASF2Q9Y6W5 498 aa10.06□□□□□ -0.8
DROSHA-213ENST00000511778 BMP1P13497 986 aa10.05□□□□□ -0.8
DROSHA-213ENST00000511778 JUNDP17535 347 aa10.05□□□□□ -0.8
DROSHA-213ENST00000511778 EHBP1Q8NDI1 1231 aa10.05□□□□□ -0.8
DROSHA-213ENST00000511778 HLA-CQ95604 372 aa10.05□□□□□ -0.8
DROSHA-213ENST00000511778 LOC100996750A0A140TA64 210 aa10.04□□□□□ -0.8
DROSHA-213ENST00000511778 H3BM21 787 aa10.04□□□□□ -0.8
DROSHA-213ENST00000511778 VEGFBP49765 207 aa10.04□□□□□ -0.8
DROSHA-213ENST00000511778 GPIHBP1Q8IV16 184 aa10.04□□□□□ -0.8
DROSHA-213ENST00000511778 KRTAP4-6Q9BYQ5 205 aa10.04□□□□□ -0.8
DROSHA-213ENST00000511778 HOXA2O43364 376 aa10.02□□□□□ -0.81
DROSHA-213ENST00000511778 NUDT12Q9BQG2 462 aa10.01□□□□□ -0.81
DROSHA-213ENST00000511778 PTCRAQ6ISU1 281 aaPredicted RBP10□□□□□ -0.81
DROSHA-213ENST00000511778 ERBB4Q15303 1308 aa10□□□□□ -0.81
DROSHA-213ENST00000511778 SYMPKQ92797 1274 aaKnown RBP9.99□□□□□ -0.81
DROSHA-213ENST00000511778 ZFP42Q96MM3 310 aa9.99□□□□□ -0.81
DROSHA-213ENST00000511778 GUCA2AQ02747 115 aa9.98□□□□□ -0.81
DROSHA-213ENST00000511778 SH3BP2P78314 561 aa9.97□□□□□ -0.81
DROSHA-213ENST00000511778 MDM2Q00987 491 aaPredicted RBP9.97□□□□□ -0.81
DROSHA-213ENST00000511778 MAP2K5Q13163 448 aa9.97□□□□□ -0.81
DROSHA-213ENST00000511778 RETREG3Q86VR2 466 aa9.97□□□□□ -0.81
DROSHA-213ENST00000511778 IRF6O14896 467 aa9.93□□□□□ -0.82
DROSHA-213ENST00000511778 CCNYL3P0C7X3 344 aa9.92□□□□□ -0.82
DROSHA-213ENST00000511778 PLEKHG3A1L390 1219 aa9.91□□□□□ -0.82
DROSHA-213ENST00000511778 MS4A1P11836 297 aa9.91□□□□□ -0.82
DROSHA-213ENST00000511778 SCARF1Q14162 830 aa9.91□□□□□ -0.82
DROSHA-213ENST00000511778 MRPL14Q6P1L8 145 aaKnown RBP9.91□□□□□ -0.82
DROSHA-213ENST00000511778 NUTM1Q86Y26 1132 aa9.91□□□□□ -0.82
DROSHA-213ENST00000511778 TLL2Q9Y6L7 1015 aa9.9□□□□□ -0.82
DROSHA-213ENST00000511778 NNTQ13423 1086 aa9.89□□□□□ -0.83
DROSHA-213ENST00000511778 SUZ12Q15022 739 aaKnown RBP9.89□□□□□ -0.83
DROSHA-213ENST00000511778 MPNDQ8N594 471 aa9.89□□□□□ -0.83
DROSHA-213ENST00000511778 UNC93B1Q9H1C4 597 aa9.89□□□□□ -0.83
DROSHA-213ENST00000511778 MINK1Q8N4C8 1332 aaPredicted RBP9.88□□□□□ -0.83
DROSHA-213ENST00000511778 C6orf229H3BNL8 230 aa9.88□□□□□ -0.83
DROSHA-213ENST00000511778 VSIG8P0DPA2 414 aa9.88□□□□□ -0.83
DROSHA-213ENST00000511778 FDX1P10109 184 aa9.88□□□□□ -0.83
DROSHA-213ENST00000511778 VARSP26640 1264 aaKnown RBP9.88□□□□□ -0.83
DROSHA-213ENST00000511778 PTPRNQ16849 979 aa9.88□□□□□ -0.83
DROSHA-213ENST00000511778 LINC01559Q495D7 138 aa9.88□□□□□ -0.83
DROSHA-213ENST00000511778 BAP1Q92560 729 aa9.88□□□□□ -0.83
DROSHA-213ENST00000511778 PURBQ96QR8 312 aaKnown RBP9.88□□□□□ -0.83
DROSHA-213ENST00000511778 GPCPD1Q9NPB8 672 aa9.88□□□□□ -0.83
DROSHA-213ENST00000511778 EVA1BQ9NVM1 165 aa9.88□□□□□ -0.83
DROSHA-213ENST00000511778 FAM217BQ9NTX9 383 aaPredicted RBP9.87□□□□□ -0.83
DROSHA-213ENST00000511778 TIMP2P16035 220 aa9.86□□□□□ -0.83
DROSHA-213ENST00000511778 CLCN1P35523 988 aa9.86□□□□□ -0.83
DROSHA-213ENST00000511778 PCDHGC3Q9UN70 934 aa9.86□□□□□ -0.83
DROSHA-213ENST00000511778 SOBPA7XYQ1 873 aa9.85□□□□□ -0.83
DROSHA-213ENST00000511778 ADH1CP00326 375 aa9.85□□□□□ -0.83
DROSHA-213ENST00000511778 WDR4P57081 412 aaKnown RBP9.85□□□□□ -0.83
DROSHA-213ENST00000511778 KCNMA1Q12791 1236 aa9.85□□□□□ -0.83
DROSHA-213ENST00000511778 KCNH2Q12809 1159 aa9.85□□□□□ -0.83
DROSHA-213ENST00000511778 ZNF511Q8NB15 262 aa9.84□□□□□ -0.83
DROSHA-213ENST00000511778 CCDC102AQ96A19 550 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms