RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 FAM193AP78312 1265 aa9.06□□□□□ -0.96
CPNE4-208ENST00000511604 FEZ1Q99689 392 aa9.06□□□□□ -0.96
CPNE4-208ENST00000511604 CCDC39Q9UFE4 941 aa9.06□□□□□ -0.96
CPNE4-208ENST00000511604 COG6Q9Y2V7 657 aa9.06□□□□□ -0.96
CPNE4-208ENST00000511604 ZNF644Q9H582 1327 aaPredicted RBP9.06□□□□□ -0.96
CPNE4-208ENST00000511604 PRDM2Q13029 1718 aa9.06□□□□□ -0.96
CPNE4-208ENST00000511604 SLFN14P0C7P3 912 aa9.06□□□□□ -0.96
CPNE4-208ENST00000511604 BCL2L12Q9HB09 334 aa9.06□□□□□ -0.96
CPNE4-208ENST00000511604 FOXD4L1Q9NU39 408 aa9.06□□□□□ -0.96
CPNE4-208ENST00000511604 NCOA3Q9Y6Q9 1424 aa9.05□□□□□ -0.96
CPNE4-208ENST00000511604 HSP90B1P14625 803 aaKnown RBP9.05□□□□□ -0.96
CPNE4-208ENST00000511604 MAGI3Q5TCQ9 1506 aa9.05□□□□□ -0.96
CPNE4-208ENST00000511604 KDM5CP41229 1560 aa9.05□□□□□ -0.96
CPNE4-208ENST00000511604 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.05□□□□□ -0.96
CPNE4-208ENST00000511604 FAM177BA6PVY3 158 aa9.05□□□□□ -0.96
CPNE4-208ENST00000511604 KIAA2012Q0VF49 1180 aa9.05□□□□□ -0.96
CPNE4-208ENST00000511604 CCDC146Q8IYE0 955 aa9.05□□□□□ -0.96
CPNE4-208ENST00000511604 OGFRQ9NZT2 677 aa9.05□□□□□ -0.96
CPNE4-208ENST00000511604 BLMP54132 1417 aaPredicted RBP9.04□□□□□ -0.96
CPNE4-208ENST00000511604 SNAPC4Q5SXM2 1469 aa9.04□□□□□ -0.96
CPNE4-208ENST00000511604 ZNF445P59923 1031 aa9.04□□□□□ -0.96
CPNE4-208ENST00000511604 RAB3GAP1Q15042 981 aa9.04□□□□□ -0.96
CPNE4-208ENST00000511604 KLHL40Q2TBA0 621 aa9.04□□□□□ -0.96
CPNE4-208ENST00000511604 ILDR1Q86SU0 546 aaPredicted RBP9.04□□□□□ -0.96
CPNE4-208ENST00000511604 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.04□□□□□ -0.96
CPNE4-208ENST00000511604 EFCC1Q9HA90 598 aa9.04□□□□□ -0.96
CPNE4-208ENST00000511604 CALCOCO1Q9P1Z2 691 aa9.04□□□□□ -0.96
CPNE4-208ENST00000511604 EIF3AQ14152 1382 aaKnown RBP9.04□□□□□ -0.96
CPNE4-208ENST00000511604 TULP1O00294 542 aaPredicted RBP9.03□□□□□ -0.96
CPNE4-208ENST00000511604 MFAP1P55081 439 aaKnown RBP9.03□□□□□ -0.96
CPNE4-208ENST00000511604 HSCBQ8IWL3 235 aa9.03□□□□□ -0.96
CPNE4-208ENST00000511604 CIZ1Q9ULV3 898 aaPredicted RBP9.03□□□□□ -0.96
CPNE4-208ENST00000511604 PCDHB15Q9Y5E8 787 aa9.03□□□□□ -0.96
CPNE4-208ENST00000511604 MBD5Q9P267 1494 aa9.03□□□□□ -0.96
CPNE4-208ENST00000511604 ZNF608Q9ULD9 1512 aaPredicted RBP9.03□□□□□ -0.96
CPNE4-208ENST00000511604 RBSNQ9H1K0 784 aa9.03□□□□□ -0.96
CPNE4-208ENST00000511604 CCDC144AA2RUR9 1427 aa9.03□□□□□ -0.96
CPNE4-208ENST00000511604 RTEL1-TNFRSF6BF6WH68 1400 aa9.03□□□□□ -0.96
CPNE4-208ENST00000511604 LRRIQ1Q96JM4 1722 aa9.02□□□□□ -0.96
CPNE4-208ENST00000511604 PATL2C9JE40 543 aaKnown RBP9.02□□□□□ -0.96
CPNE4-208ENST00000511604 PRR29P0C7W0 189 aa9.02□□□□□ -0.96
CPNE4-208ENST00000511604 ANKRD7Q92527 254 aa9.02□□□□□ -0.96
CPNE4-208ENST00000511604 PDZRN3Q9UPQ7 1066 aa9.02□□□□□ -0.96
CPNE4-208ENST00000511604 DDX49Q9Y6V7 483 aaKnown RBP9.02□□□□□ -0.96
CPNE4-208ENST00000511604 ZNF521Q96K83 1311 aa9.02□□□□□ -0.96
CPNE4-208ENST00000511604 LOC102724159A0A0B4J2E5 919 aa9.02□□□□□ -0.97
CPNE4-208ENST00000511604 SLFN5Q08AF3 891 aa9.02□□□□□ -0.97
CPNE4-208ENST00000511604 PWP2Q15269 919 aaKnown RBP9.02□□□□□ -0.97
CPNE4-208ENST00000511604 PTMAP06454 111 aaKnown RBP9.01□□□□□ -0.97
CPNE4-208ENST00000511604 GOLGA2Q08379 1002 aa9.01□□□□□ -0.97
CPNE4-208ENST00000511604 FEZ2Q9UHY8 353 aaPredicted RBP9.01□□□□□ -0.97
CPNE4-208ENST00000511604 CTTNBP2Q8WZ74 1663 aa9.01□□□□□ -0.97
CPNE4-208ENST00000511604 ZMYM4Q5VZL5 1548 aa9.01□□□□□ -0.97
CPNE4-208ENST00000511604 ZMYM3Q14202 1370 aa9.01□□□□□ -0.97
CPNE4-208ENST00000511604 GOLGA6L22H0YM25 854 aa9.01□□□□□ -0.97
CPNE4-208ENST00000511604 PKD2Q13563 968 aa9.01□□□□□ -0.97
CPNE4-208ENST00000511604 TERF2Q15554 542 aa9.01□□□□□ -0.97
CPNE4-208ENST00000511604 C22orf23Q9BZE7 217 aa9.01□□□□□ -0.97
CPNE4-208ENST00000511604 CLASP1Q7Z460 1538 aa9□□□□□ -0.97
CPNE4-208ENST00000511604 PLEKHH2Q8IVE3 1493 aa9□□□□□ -0.97
CPNE4-208ENST00000511604 CD2BP2O95400 341 aaKnown RBP9□□□□□ -0.97
CPNE4-208ENST00000511604 RLBP1P12271 317 aa9□□□□□ -0.97
CPNE4-208ENST00000511604 SMC5Q8IY18 1101 aa9□□□□□ -0.97
CPNE4-208ENST00000511604 CLUAP1Q96AJ1 413 aa9□□□□□ -0.97
CPNE4-208ENST00000511604 MLECQ14165 292 aa9□□□□□ -0.97
CPNE4-208ENST00000511604 EFCAB5A4FU69 1503 aa9□□□□□ -0.97
CPNE4-208ENST00000511604 GCC2Q8IWJ2 1684 aa8.99□□□□□ -0.97
CPNE4-208ENST00000511604 ZSCAN23Q3MJ62 389 aa8.99□□□□□ -0.97
CPNE4-208ENST00000511604 MPNDQ8N594 471 aa8.99□□□□□ -0.97
CPNE4-208ENST00000511604 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.99□□□□□ -0.97
CPNE4-208ENST00000511604 TNNT3P45378 269 aaPredicted RBP8.99□□□□□ -0.97
CPNE4-208ENST00000511604 GRIPAP1Q4V328 841 aa8.99□□□□□ -0.97
CPNE4-208ENST00000511604 PIBF1Q8WXW3 757 aa8.99□□□□□ -0.97
CPNE4-208ENST00000511604 CARD10Q9BWT7 1032 aa8.99□□□□□ -0.97
CPNE4-208ENST00000511604 CAMSAP2Q08AD1 1489 aa8.99□□□□□ -0.97
CPNE4-208ENST00000511604 UGGT2Q9NYU1 1516 aa8.98□□□□□ -0.97
CPNE4-208ENST00000511604 PRIM1P49642 420 aaKnown RBP8.98□□□□□ -0.97
CPNE4-208ENST00000511604 NOLC1Q14978 699 aaKnown RBP eCLIP8.98□□□□□ -0.97
CPNE4-208ENST00000511604 CHAMP1Q96JM3 812 aa8.98□□□□□ -0.97
CPNE4-208ENST00000511604 PZPP20742 1482 aa8.98□□□□□ -0.97
CPNE4-208ENST00000511604 INSRP06213 1382 aa8.98□□□□□ -0.97
CPNE4-208ENST00000511604 APAF1O14727 1248 aa8.98□□□□□ -0.97
CPNE4-208ENST00000511604 TRMT2AQ8IZ69 625 aaKnown RBP8.98□□□□□ -0.97
CPNE4-208ENST00000511604 SIRT1Q96EB6 747 aa8.98□□□□□ -0.97
CPNE4-208ENST00000511604 BCL2L13Q9BXK5 485 aa8.98□□□□□ -0.97
CPNE4-208ENST00000511604 ERICH4A6NGS2 130 aa8.97□□□□□ -0.97
CPNE4-208ENST00000511604 SSFA2P28290 1259 aa8.97□□□□□ -0.97
CPNE4-208ENST00000511604 CAVIN1Q6NZI2 390 aaKnown RBP8.97□□□□□ -0.97
CPNE4-208ENST00000511604 TMED8Q6PL24 325 aaPredicted RBP8.97□□□□□ -0.97
CPNE4-208ENST00000511604 CLEC17AQ6ZS10 378 aa8.97□□□□□ -0.97
CPNE4-208ENST00000511604 TRERF1Q96PN7 1200 aa8.97□□□□□ -0.97
CPNE4-208ENST00000511604 KIAA1107Q9UPP5 1409 aa8.97□□□□□ -0.97
CPNE4-208ENST00000511604 LMOD3Q0VAK6 560 aa8.97□□□□□ -0.97
CPNE4-208ENST00000511604 FKBP5Q13451 457 aaPredicted RBP8.97□□□□□ -0.97
CPNE4-208ENST00000511604 EP400NLQ6ZTU2 488 aa8.97□□□□□ -0.97
CPNE4-208ENST00000511604 CTNNA3Q9UI47 895 aa8.97□□□□□ -0.97
CPNE4-208ENST00000511604 DDX41Q9UJV9 622 aaKnown RBP8.97□□□□□ -0.97
CPNE4-208ENST00000511604 DISP3Q9P2K9 1392 aa8.97□□□□□ -0.97
CPNE4-208ENST00000511604 TCOF1Q13428 1488 aaKnown RBP8.97□□□□□ -0.97
CPNE4-208ENST00000511604 ARHGAP31Q2M1Z3 1444 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms