RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 DLC1Q96QB1 1528 aa10.23□□□□□ -0.77
PDLIM5-215ENST00000511586 SAFB2Q14151 953 aaKnown RBP eCLIP10.23□□□□□ -0.77
PDLIM5-215ENST00000511586 KIAA1210Q9ULL0 1709 aa10.22□□□□□ -0.77
PDLIM5-215ENST00000511586 NBPF8Q3BBV2 869 aa10.22□□□□□ -0.77
PDLIM5-215ENST00000511586 TIMELESSQ9UNS1 1208 aa10.22□□□□□ -0.77
PDLIM5-215ENST00000511586 MST1RQ04912 1400 aa10.22□□□□□ -0.77
PDLIM5-215ENST00000511586 NALCNQ8IZF0 1738 aa10.21□□□□□ -0.77
PDLIM5-215ENST00000511586 BRINP3Q76B58 766 aa10.21□□□□□ -0.77
PDLIM5-215ENST00000511586 ROCK2O75116 1388 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-215ENST00000511586 C1orf167Q5SNV9 1468 aa10.2□□□□□ -0.78
PDLIM5-215ENST00000511586 MINK1Q8N4C8 1332 aaPredicted RBP10.2□□□□□ -0.78
PDLIM5-215ENST00000511586 ROBO1Q9Y6N7 1651 aa10.2□□□□□ -0.78
PDLIM5-215ENST00000511586 CDC42BPGQ6DT37 1551 aa10.19□□□□□ -0.78
PDLIM5-215ENST00000511586 NUTM2FA1L443 756 aa10.19□□□□□ -0.78
PDLIM5-215ENST00000511586 ESCO1Q5FWF5 840 aa10.19□□□□□ -0.78
PDLIM5-215ENST00000511586 ORAI2Q96SN7 254 aa10.19□□□□□ -0.78
PDLIM5-215ENST00000511586 HIRIP3Q9BW71 556 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-215ENST00000511586 CENPJQ9HC77 1338 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-215ENST00000511586 WASLO00401 505 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-215ENST00000511586 CARD11Q9BXL7 1154 aa10.17□□□□□ -0.78
PDLIM5-215ENST00000511586 TRPM1Q7Z4N2 1603 aa10.17□□□□□ -0.78
PDLIM5-215ENST00000511586 GPRASP1Q5JY77 1395 aa10.16□□□□□ -0.78
PDLIM5-215ENST00000511586 EIF3AQ14152 1382 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-215ENST00000511586 DDX17Q92841 729 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-215ENST00000511586 ARHGEF28Q8N1W1 1705 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-215ENST00000511586 RALGAPBQ86X10 1494 aa10.15□□□□□ -0.78
PDLIM5-215ENST00000511586 AHDC1Q5TGY3 1603 aaPredicted RBP10.15□□□□□ -0.79
PDLIM5-215ENST00000511586 ADGRB2O60241 1585 aa10.14□□□□□ -0.79
PDLIM5-215ENST00000511586 NPHP3Q7Z494 1330 aa10.14□□□□□ -0.79
PDLIM5-215ENST00000511586 FOXO3O43524 673 aa10.14□□□□□ -0.79
PDLIM5-215ENST00000511586 LRRC59Q96AG4 307 aaKnown RBP10.14□□□□□ -0.79
PDLIM5-215ENST00000511586 CDK19Q9BWU1 502 aa10.14□□□□□ -0.79
PDLIM5-215ENST00000511586 PHF8Q9UPP1 1060 aa10.14□□□□□ -0.79
PDLIM5-215ENST00000511586 ANKARQ7Z5J8 1434 aa10.14□□□□□ -0.79
PDLIM5-215ENST00000511586 JCADQ9P266 1359 aa10.14□□□□□ -0.79
PDLIM5-215ENST00000511586 PHLPP1O60346 1717 aa10.13□□□□□ -0.79
PDLIM5-215ENST00000511586 FMN2Q9NZ56 1722 aa10.13□□□□□ -0.79
PDLIM5-215ENST00000511586 SOS2Q07890 1332 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-215ENST00000511586 SRPK2P78362 688 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-215ENST00000511586 NUDT16Q96DE0 195 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-215ENST00000511586 TULP4Q9NRJ4 1543 aa10.12□□□□□ -0.79
PDLIM5-215ENST00000511586 COL16A1Q07092 1604 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-215ENST00000511586 EVC2Q86UK5 1308 aa10.11□□□□□ -0.79
PDLIM5-215ENST00000511586 PRR36Q9H6K5 1346 aa10.11□□□□□ -0.79
PDLIM5-215ENST00000511586 PSME1Q06323 249 aa10.11□□□□□ -0.79
PDLIM5-215ENST00000511586 PMFBP1Q8TBY8 1022 aa10.11□□□□□ -0.79
PDLIM5-215ENST00000511586 CCDC61Q9Y6R9 512 aa10.11□□□□□ -0.79
PDLIM5-215ENST00000511586 NHSL1Q5SYE7 1610 aa10.11□□□□□ -0.79
PDLIM5-215ENST00000511586 SPATA31A6Q5VVP1 1343 aa10.1□□□□□ -0.79
PDLIM5-215ENST00000511586 XPCQ01831 940 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-215ENST00000511586 KRT28Q7Z3Y7 464 aa10.1□□□□□ -0.79
PDLIM5-215ENST00000511586 SLC24A1O60721 1099 aa10.09□□□□□ -0.79
PDLIM5-215ENST00000511586 NGDNQ8NEJ9 315 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-215ENST00000511586 CABP2Q9NPB3 220 aa10.09□□□□□ -0.79
PDLIM5-215ENST00000511586 KIF1AQ12756 1690 aa10.09□□□□□ -0.79
PDLIM5-215ENST00000511586 QRICH2Q9H0J4 1663 aa10.09□□□□□ -0.79
PDLIM5-215ENST00000511586 USP32Q8NFA0 1604 aa10.08□□□□□ -0.8
PDLIM5-215ENST00000511586 ST20-MTHFSA0A0A6YYL1 179 aa10.08□□□□□ -0.8
PDLIM5-215ENST00000511586 PLEKHG3A1L390 1219 aa10.08□□□□□ -0.8
PDLIM5-215ENST00000511586 SBNO2Q9Y2G9 1366 aa10.08□□□□□ -0.8
PDLIM5-215ENST00000511586 ATP7BP35670 1465 aa10.08□□□□□ -0.8
PDLIM5-215ENST00000511586 PXDNQ92626 1479 aa10.08□□□□□ -0.8
PDLIM5-215ENST00000511586 RGPD8O14715 1765 aaPredicted RBP10.07□□□□□ -0.8
PDLIM5-215ENST00000511586 PNPLA6Q8IY17 1366 aa10.07□□□□□ -0.8
PDLIM5-215ENST00000511586 DISP3Q9P2K9 1392 aa10.07□□□□□ -0.8
PDLIM5-215ENST00000511586 NUTM2BA6NNL0 878 aaPredicted RBP10.07□□□□□ -0.8
PDLIM5-215ENST00000511586 NUTM2EB1AL46 878 aaPredicted RBP10.07□□□□□ -0.8
PDLIM5-215ENST00000511586 NUTM2AQ8IVF1 878 aaPredicted RBP10.07□□□□□ -0.8
PDLIM5-215ENST00000511586 SPATA31A3Q5VYP0 1347 aa10.07□□□□□ -0.8
PDLIM5-215ENST00000511586 MED1Q15648 1581 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-215ENST00000511586 SBNO1A3KN83 1393 aa10.06□□□□□ -0.8
PDLIM5-215ENST00000511586 USP47Q96K76 1375 aa10.06□□□□□ -0.8
PDLIM5-215ENST00000511586 PHF23Q9BUL5 403 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-215ENST00000511586 ACEP12821 1306 aa10.06□□□□□ -0.8
PDLIM5-215ENST00000511586 MEX3CQ5U5Q3 659 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-215ENST00000511586 PUS7Q96PZ0 661 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-215ENST00000511586 TESK2Q96S53 571 aa10.05□□□□□ -0.8
PDLIM5-215ENST00000511586 CABP1Q9NZU7 370 aa10.05□□□□□ -0.8
PDLIM5-215ENST00000511586 PPIP5K1Q6PFW1 1433 aa10.05□□□□□ -0.8
PDLIM5-215ENST00000511586 SHPRHQ149N8 1683 aa10.05□□□□□ -0.8
PDLIM5-215ENST00000511586 POLR3AO14802 1390 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-215ENST00000511586 ATAD2Q6PL18 1390 aa10.04□□□□□ -0.8
PDLIM5-215ENST00000511586 PAK3O75914 559 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-215ENST00000511586 LMOD2Q6P5Q4 547 aa10.04□□□□□ -0.8
PDLIM5-215ENST00000511586 ARHGEF10O15013 1369 aa10.03□□□□□ -0.8
PDLIM5-215ENST00000511586 TMF1P82094 1093 aa10.03□□□□□ -0.8
PDLIM5-215ENST00000511586 ITSN1Q15811 1721 aa10.03□□□□□ -0.8
PDLIM5-215ENST00000511586 TNS3Q68CZ2 1445 aa10.03□□□□□ -0.8
PDLIM5-215ENST00000511586 ZNF692Q9BU19 519 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-215ENST00000511586 ADAMTS2O95450 1211 aa10.02□□□□□ -0.81
PDLIM5-215ENST00000511586 EIF4G2P78344 907 aaKnown RBP eCLIP10.02□□□□□ -0.81
PDLIM5-215ENST00000511586 LRP6O75581 1613 aa10.02□□□□□ -0.81
PDLIM5-215ENST00000511586 TOPAZ1Q8N9V7 1692 aa10.02□□□□□ -0.81
PDLIM5-215ENST00000511586 HAP1P54257 671 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-215ENST00000511586 CDCA8Q53HL2 280 aa10.01□□□□□ -0.81
PDLIM5-215ENST00000511586 TMC1Q8TDI8 760 aa10.01□□□□□ -0.81
PDLIM5-215ENST00000511586 BRD4O60885 1362 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-215ENST00000511586 COL22A1Q8NFW1 1626 aaPredicted RBP10□□□□□ -0.81
PDLIM5-215ENST00000511586 PLEKHG5O94827 1062 aa10□□□□□ -0.81
PDLIM5-215ENST00000511586 CABLES1Q8TDN4 633 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms